RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TPCN2Q8NHX9 752 aa20.85■□□□□ 0.93
SCARF1-206ENST00000573852 NAP1L4Q99733 375 aaKnown RBP20.85■□□□□ 0.93
SCARF1-206ENST00000573852 ANO3Q9BYT9 981 aa20.85■□□□□ 0.93
SCARF1-206ENST00000573852 NEUROG2Q9H2A3 272 aa20.85■□□□□ 0.93
SCARF1-206ENST00000573852 BZW2Q9Y6E2 419 aaKnown RBP20.85■□□□□ 0.93
SCARF1-206ENST00000573852 H0YGN5 161 aa20.85■□□□□ 0.93
SCARF1-206ENST00000573852 MPHOSPH10O00566 681 aaKnown RBP20.85■□□□□ 0.93
SCARF1-206ENST00000573852 PABPC4Q13310 644 aaKnown RBP eCLIP20.85■□□□□ 0.93
SCARF1-206ENST00000573852 SFR1Q86XK3 245 aa20.85■□□□□ 0.93
SCARF1-206ENST00000573852 ZNF473Q8WTR7 871 aaKnown RBP20.85■□□□□ 0.93
SCARF1-206ENST00000573852 NFS1Q9Y697 457 aa20.85■□□□□ 0.93
SCARF1-206ENST00000573852 CYP3A7-CYP3A51PA0A087WV96 503 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 KDM4FA0A1W2PPD8 638 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 BHMG1C9JSJ3 638 aaPredicted RBP20.84■□□□□ 0.93
SCARF1-206ENST00000573852 SART1O43290 800 aaKnown RBP20.84■□□□□ 0.93
SCARF1-206ENST00000573852 AKAP3O75969 853 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 CYP3A7P24462 503 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 GTF2A1P52655 376 aaPredicted RBP20.84■□□□□ 0.93
SCARF1-206ENST00000573852 SPIRE1Q08AE8 756 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 QRICH1Q2TAL8 776 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 CRY2Q49AN0 593 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 EPM2AIP1Q7L775 607 aaPredicted RBP20.84■□□□□ 0.93
SCARF1-206ENST00000573852 REEP2Q9BRK0 252 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 BCAS3Q9H6U6 928 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 PRKCIP41743 596 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 CUL1Q13616 776 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 EPHA7Q15375 998 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 DCAF17Q5H9S7 520 aaPredicted RBP20.84■□□□□ 0.93
SCARF1-206ENST00000573852 EIF1ADQ8N9N8 165 aaKnown RBP20.84■□□□□ 0.93
SCARF1-206ENST00000573852 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.84■□□□□ 0.93
SCARF1-206ENST00000573852 MBOAT7Q96N66 472 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 P2RX7Q99572 595 aaKnown RBP20.84■□□□□ 0.93
SCARF1-206ENST00000573852 DDX47Q9H0S4 455 aaKnown RBP20.84■□□□□ 0.93
SCARF1-206ENST00000573852 CENPHQ9H3R5 247 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 SIX2Q9NPC8 291 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 NENFQ9UMX5 172 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 NOC2LQ9Y3T9 749 aaKnown RBP20.84■□□□□ 0.93
SCARF1-206ENST00000573852 PCDHA1Q9Y5I3 950 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 KIF13BQ9NQT8 1826 aa20.84■□□□□ 0.93
SCARF1-206ENST00000573852 C6orf229H3BNL8 230 aa20.83■□□□□ 0.93
SCARF1-206ENST00000573852 HPDP32754 393 aaPredicted RBP20.83■□□□□ 0.93
SCARF1-206ENST00000573852 IFI16Q16666 785 aaKnown RBP20.83■□□□□ 0.93
SCARF1-206ENST00000573852 CERKQ8TCT0 537 aa20.83■□□□□ 0.93
SCARF1-206ENST00000573852 CCT8L2Q96SF2 557 aa20.83■□□□□ 0.93
SCARF1-206ENST00000573852 ATXN2Q99700 1313 aaKnown RBP20.83■□□□□ 0.93
SCARF1-206ENST00000573852 PGRMC1O00264 195 aaKnown RBP20.83■□□□□ 0.92
SCARF1-206ENST00000573852 MEFVO15553 781 aaPredicted RBP20.83■□□□□ 0.92
SCARF1-206ENST00000573852 SPATA31C1P0DKV0 1188 aa20.83■□□□□ 0.92
SCARF1-206ENST00000573852 XRCC5P13010 732 aaKnown RBP20.83■□□□□ 0.92
SCARF1-206ENST00000573852 CASP4P49662 377 aa20.83■□□□□ 0.92
SCARF1-206ENST00000573852 GJB7Q6PEY0 223 aa20.83■□□□□ 0.92
SCARF1-206ENST00000573852 LRIG3Q6UXM1 1119 aa20.83■□□□□ 0.92
SCARF1-206ENST00000573852 NLRP14Q86W24 1093 aa20.83■□□□□ 0.92
SCARF1-206ENST00000573852 SUGP1Q8IWZ8 645 aaKnown RBP20.83■□□□□ 0.92
SCARF1-206ENST00000573852 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.83■□□□□ 0.922e-6■■□□□ 13.2
SCARF1-206ENST00000573852 TMCO5BA8MYB1 307 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 SLC26A4O43511 780 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 ITGA4P13612 1032 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 FLT3P36888 993 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 PPARDQ03181 441 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 SLFN12Q8IYM2 578 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 ETNPPLQ8TBG4 499 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 MYCBPAPQ8TBZ2 947 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 CALR3Q96L12 384 aaKnown RBP20.82■□□□□ 0.92
SCARF1-206ENST00000573852 RSPH10B2B2RC85 870 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 RAD21O60216 631 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 RSPH10BP0C881 870 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 HDLBPQ00341 1268 aaKnown RBP20.82■□□□□ 0.92
SCARF1-206ENST00000573852 PRR16Q569H4 304 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 TCERG1LQ5VWI1 586 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 FAM196AQ6ZSG2 479 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 OTUD6BQ8N6M0 293 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 SYT2Q8N9I0 419 aaPredicted RBP20.82■□□□□ 0.92
SCARF1-206ENST00000573852 PAGR1Q9BTK6 254 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 USP40Q9NVE5 1235 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 STXBP5LQ9Y2K9 1186 aa20.82■□□□□ 0.92
SCARF1-206ENST00000573852 KRIT1O00522 736 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 PDXKO00764 312 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 MEIS2O14770 477 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 FLOT1O75955 427 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 KIAA0754O94854 1291 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 HNRNPH1P31943 449 aaKnown RBP20.81■□□□□ 0.92
SCARF1-206ENST00000573852 FNTAP49354 379 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 JAM2P57087 298 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 KCNV1Q6PIU1 500 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 PEX26Q7Z412 305 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 SLFN11Q7Z7L1 901 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 CERS5Q8N5B7 392 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 RBM17Q96I25 401 aaKnown RBP20.81■□□□□ 0.92
SCARF1-206ENST00000573852 DNM3Q9UQ16 869 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 CAPN7Q9Y6W3 813 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 TAF1LQ8IZX4 1826 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 GOLGA6L10A6NI86 522 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 GCOM1H8Y6P7 765 aaPredicted RBP20.81■□□□□ 0.92
SCARF1-206ENST00000573852 MYZAPP0CAP1 466 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 ZNF844Q08AG5 666 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 SPATS2Q86XZ4 545 aaKnown RBP20.81■□□□□ 0.92
SCARF1-206ENST00000573852 AMACRQ9UHK6 382 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 ASTN1O14525 1302 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 DDX3XO00571 662 aaKnown RBP eCLIP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms