RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ZNF746Q6NUN9 644 aaPredicted RBP14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 BLIDQ8IZY5 108 aa14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 C22orf23Q9BZE7 217 aa14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 INSL6Q9Y581 213 aa14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 CHMP2AO43633 222 aa14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 HBP1O60381 514 aa14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 PFKFB2O60825 505 aa14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 EIF5BO60841 1220 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 RPLP2P05387 115 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 KLRC1P26715 233 aa14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 USP11P51784 963 aa14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 SKIV2LQ15477 1246 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 MTHFD1LQ6UB35 978 aa14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 SMAP1Q8IYB5 467 aaPredicted RBP14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 ATP8B4Q8TF62 1192 aa14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 YME1L1Q96TA2 773 aa14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 GABBR1Q9UBS5 961 aa14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 KCNJ14Q9UNX9 436 aa14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 PCDHA2Q9Y5H9 948 aa14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 PCDHA10Q9Y5I2 948 aa14.38□□□□□ -0.11
NPLOC4-213ENST00000573519 LINC01553A4QN01 128 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 MSH4O15457 936 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 GAS7O60861 476 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 XBP1P17861 261 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 GRB10Q13322 594 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 MKRN4PQ13434 485 aaPredicted RBP14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 C8orf34Q49A92 452 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 FBXO47Q5MNV8 452 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 LRCH2Q5VUJ6 765 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 KRT40Q6A162 431 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 GALNT17Q6IS24 598 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 TSHZ1Q6ZSZ6 1077 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 DAGLBQ8NCG7 672 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 GDPD5Q8WTR4 605 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 GJA10Q969M2 543 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 TOP1MTQ969P6 601 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 LENG9Q96B70 501 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 TGS1Q96RS0 853 aaKnown RBP14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 COL25A1Q9BXS0 654 aaPredicted RBP14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 GINS2Q9Y248 185 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 TRPV2Q9Y5S1 764 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 MTCH2Q9Y6C9 303 aa14.37□□□□□ -0.11
NPLOC4-213ENST00000573519 UNC80Q8N2C7 3258 aa14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 SMIM35A0A1B0GVV1 85 aa14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 WDR64B1ANS9 1081 aa14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 TDP2O95551 362 aa14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 ATP4AP20648 1035 aa14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 CD52P31358 61 aa14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 NONOQ15233 471 aaKnown RBP eCLIP14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 ZNF484Q5JVG2 852 aa14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 NECAB1Q8N987 351 aa14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 BBXQ8WY36 941 aaPredicted RBP14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 TEKT3Q9BXF9 490 aa14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 CELF4Q9BZC1 486 aaKnown RBP14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 DISC1Q9NRI5 854 aa14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 THEGQ9P2T0 379 aa14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 MAFBQ9Y5Q3 323 aaPredicted RBP14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 STK36Q9NRP7 1315 aa14.36□□□□□ -0.11
NPLOC4-213ENST00000573519 COL1A2P08123 1366 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 CCDC194A0A1B0GVG4 234 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 M0R2N6 131 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 EDIL3O43854 480 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 IBSPP21815 317 aaPredicted RBP14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 NEK4P51957 841 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 ERVK-21P61565 698 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 HTRA4P83105 476 aaPredicted RBP14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 PAK2Q13177 524 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 NPY5RQ15761 445 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 INF2Q27J81 1249 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 LETM2Q2VYF4 491 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 Q4G0T1 1027 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 KRT25Q7Z3Z0 450 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 FAM177A1Q8N128 213 aaPredicted RBP14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 NME8Q8N427 588 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 METTL13Q8N6R0 699 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 FBXO22Q8NEZ5 403 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 SLC5A5Q92911 643 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 PPP1R16BQ96T49 567 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 RIT2Q99578 217 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 C17orf80Q9BSJ5 609 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 PHF20Q9BVI0 1012 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 UNC45AQ9H3U1 944 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 AGO3Q9H9G7 860 aaKnown RBP14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 SUGCTQ9HAC7 445 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 GJB4Q9NTQ9 266 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 ORC3Q9UBD5 711 aaPredicted RBP14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 SIP14410 1827 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 MICAL3Q7RTP6 2002 aa14.35□□□□□ -0.11
NPLOC4-213ENST00000573519 KAT6AQ92794 2004 aa14.34□□□□□ -0.11
NPLOC4-213ENST00000573519 COL4A4P53420 1690 aaPredicted RBP14.34□□□□□ -0.11
NPLOC4-213ENST00000573519 ENPP3O14638 875 aa14.34□□□□□ -0.11
NPLOC4-213ENST00000573519 LARGE1O95461 756 aa14.34□□□□□ -0.11
NPLOC4-213ENST00000573519 ME3Q16798 604 aa14.34□□□□□ -0.11
NPLOC4-213ENST00000573519 MIER3Q7Z3K6 550 aa14.34□□□□□ -0.11
NPLOC4-213ENST00000573519 WASF1Q92558 559 aa14.34□□□□□ -0.11
NPLOC4-213ENST00000573519 IL17RAQ96F46 866 aa14.34□□□□□ -0.11
NPLOC4-213ENST00000573519 FAM167AQ96KS9 214 aa14.34□□□□□ -0.11
NPLOC4-213ENST00000573519 DDX25Q9UHL0 483 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms