RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 BRWD1Q9NSI6 2320 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 SMCO2A6NFE2 343 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 MEIS1O00470 390 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 MMP1P03956 469 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 HMGB1P09429 215 aaKnown RBP17.72■□□□□ 0.43
TSR1-202ENST00000571806 CD52P31358 61 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 SREBF1P36956 1147 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 IRX6P78412 446 aaPredicted RBP17.72■□□□□ 0.43
TSR1-202ENST00000571806 PAK2Q13177 524 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 KRT32Q14532 448 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 RTN1Q16799 776 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 FAM160B1Q5W0V3 765 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 RAB11FIP4Q86YS3 637 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 CRIPAKQ8N1N5 446 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 UPF3BQ9BZI7 483 aaKnown RBP17.72■□□□□ 0.43
TSR1-202ENST00000571806 AGO3Q9H9G7 860 aaKnown RBP17.72■□□□□ 0.43
TSR1-202ENST00000571806 AGO4Q9HCK5 861 aaKnown RBP17.72■□□□□ 0.43
TSR1-202ENST00000571806 C11orf16Q9NQ32 467 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 BARHL2Q9NY43 387 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 PADI3Q9ULW8 664 aa17.72■□□□□ 0.43
TSR1-202ENST00000571806 V9GY48 417 aaPredicted RBP17.72■□□□□ 0.43
TSR1-202ENST00000571806 IGKV6D-21A0A0A0MT36 114 aa17.71■□□□□ 0.43
TSR1-202ENST00000571806 CCDC196A0A1B0GTZ2 297 aa17.71■□□□□ 0.43
TSR1-202ENST00000571806 GRM6O15303 877 aa17.71■□□□□ 0.43
TSR1-202ENST00000571806 HBP1O60381 514 aa17.71■□□□□ 0.43
TSR1-202ENST00000571806 ZNF76P36508 570 aa17.71■□□□□ 0.43
TSR1-202ENST00000571806 KRT76Q01546 638 aa17.71■□□□□ 0.43
TSR1-202ENST00000571806 EXOSC10Q01780 885 aaKnown RBP17.71■□□□□ 0.43
TSR1-202ENST00000571806 MTHFD1LQ6UB35 978 aa17.71■□□□□ 0.43
TSR1-202ENST00000571806 ADHFE1Q8IWW8 467 aa17.71■□□□□ 0.43
TSR1-202ENST00000571806 CYP2W1Q8TAV3 490 aa17.71■□□□□ 0.43
TSR1-202ENST00000571806 POP1Q99575 1024 aaKnown RBP17.71■□□□□ 0.43
TSR1-202ENST00000571806 ANO3Q9BYT9 981 aa17.71■□□□□ 0.43
TSR1-202ENST00000571806 COL1A2P08123 1366 aa17.7■□□□□ 0.42
TSR1-202ENST00000571806 ARP10275 920 aa17.7■□□□□ 0.42
TSR1-202ENST00000571806 SCG2P13521 617 aa17.7■□□□□ 0.42
TSR1-202ENST00000571806 CLK2P49760 499 aaKnown RBP17.7■□□□□ 0.42
TSR1-202ENST00000571806 FUT2Q10981 343 aa17.7■□□□□ 0.42
TSR1-202ENST00000571806 COL9A3Q14050 684 aaPredicted RBP17.7■□□□□ 0.42
TSR1-202ENST00000571806 RTN4RL1Q86UN2 441 aaPredicted RBP17.7■□□□□ 0.42
TSR1-202ENST00000571806 LRFN2Q9ULH4 789 aa17.7■□□□□ 0.42
TSR1-202ENST00000571806 PLAGL2Q9UPG8 496 aa17.7■□□□□ 0.42
TSR1-202ENST00000571806 C19orf67A6NJJ6 358 aa17.69■□□□□ 0.42
TSR1-202ENST00000571806 RBAK-RBAKDNI3L0D1 243 aa17.69■□□□□ 0.42
TSR1-202ENST00000571806 STXBP3O00186 592 aa17.69■□□□□ 0.42
TSR1-202ENST00000571806 DCXO43602 365 aa17.69■□□□□ 0.42
TSR1-202ENST00000571806 LTBRP36941 435 aa17.69■□□□□ 0.42
TSR1-202ENST00000571806 ZP2Q05996 745 aa17.69■□□□□ 0.42
TSR1-202ENST00000571806 HYAL1Q12794 435 aa17.69■□□□□ 0.42
TSR1-202ENST00000571806 ITGB3BPQ13352 177 aaPredicted RBP17.69■□□□□ 0.42
TSR1-202ENST00000571806 SMAD2Q15796 467 aaKnown RBP17.69■□□□□ 0.42
TSR1-202ENST00000571806 CSPP1Q1MSJ5 1256 aa17.69■□□□□ 0.42
TSR1-202ENST00000571806 ZNF484Q5JVG2 852 aa17.69■□□□□ 0.42
TSR1-202ENST00000571806 TYW1BQ6NUM6 668 aa17.69■□□□□ 0.42
TSR1-202ENST00000571806 ABHD15Q6UXT9 468 aa17.69■□□□□ 0.42
TSR1-202ENST00000571806 CCDC12Q8WUD4 166 aaPredicted RBP17.69■□□□□ 0.42
TSR1-202ENST00000571806 LINC01599Q8WXQ3 324 aa17.69■□□□□ 0.42
TSR1-202ENST00000571806 FAM86C2PA6NEL3 165 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 GOLGA8AA7E2F4 631 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 GOLGA8BA8MQT2 603 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 BACH1O14867 736 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 CYP3A4P08684 503 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 KLRC1P26715 233 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 TMEM62Q0P6H9 643 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 MIS18BP1Q6P0N0 1132 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 ATP8B4Q8TF62 1192 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 ALG13Q9NP73 1137 aaKnown RBP17.68■□□□□ 0.42
TSR1-202ENST00000571806 AAASQ9NRG9 546 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 C1orf112Q9NSG2 853 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 TBC1D22BQ9NU19 505 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 BRPF3Q9ULD4 1205 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 PCDHB7Q9Y5E2 793 aa17.68■□□□□ 0.42
TSR1-202ENST00000571806 MRPL42Q9Y6G3 142 aaKnown RBP17.68■□□□□ 0.42
TSR1-202ENST00000571806 KLF18A0A0U1RQI7 1052 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 ESYT2A0FGR8 921 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 FSD2A1L4K1 749 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 IPO5O00410 1097 aaKnown RBP17.67■□□□□ 0.42
TSR1-202ENST00000571806 GPR182O15218 404 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 RPS6KA5O75582 802 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
TSR1-202ENST00000571806 SARSP49591 514 aaKnown RBP17.67■□□□□ 0.42
TSR1-202ENST00000571806 FGD1P98174 961 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 SETQ01105 290 aaPredicted RBP17.67■□□□□ 0.42
TSR1-202ENST00000571806 ADAM15Q13444 863 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 SMAD4Q13485 552 aaKnown RBP17.67■□□□□ 0.42
TSR1-202ENST00000571806 PFKFB3Q16875 520 aaPredicted RBP17.67■□□□□ 0.42
TSR1-202ENST00000571806 PLA2G4DQ86XP0 818 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 ZNF710Q8N1W2 664 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 TRAPPC12Q8WVT3 735 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 PGBD1Q96JS3 809 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 ZNF302Q9NR11 478 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 TCEAL9Q9UHQ7 104 aa17.67■□□□□ 0.42
TSR1-202ENST00000571806 MBTPS2O43462 519 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 GNA11P29992 359 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 UBE3AQ05086 875 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 NFX1Q12986 1120 aaKnown RBP17.66■□□□□ 0.42
TSR1-202ENST00000571806 ZNF746Q6NUN9 644 aaPredicted RBP17.66■□□□□ 0.42
TSR1-202ENST00000571806 PDXDC2PQ6P474 469 aa17.66■□□□□ 0.42
TSR1-202ENST00000571806 SMAP1Q8IYB5 467 aaPredicted RBP17.66■□□□□ 0.42
TSR1-202ENST00000571806 KLHL23Q8NBE8 558 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms