RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 IGDCC4Q8TDY8 1250 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 ABCC2Q92887 1545 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 DNAJC8O75937 253 aaPredicted RBP5.88□□□□□ -1.47
NUP88-202ENST00000570937 C4BPAP04003 597 aaKnown RBP5.88□□□□□ -1.47
NUP88-202ENST00000570937 CTSWP56202 376 aa5.88□□□□□ -1.47
NUP88-202ENST00000570937 GJA9P57773 515 aa5.88□□□□□ -1.47
NUP88-202ENST00000570937 HERVK_113P62684 666 aa5.88□□□□□ -1.47
NUP88-202ENST00000570937 RGL3Q3MIN7 710 aa5.88□□□□□ -1.47
NUP88-202ENST00000570937 MCTP2Q6DN12 878 aa5.88□□□□□ -1.47
NUP88-202ENST00000570937 ZCCHC8Q6NZY4 707 aaKnown RBP5.88□□□□□ -1.47
NUP88-202ENST00000570937 OTOP1Q7RTM1 612 aa5.88□□□□□ -1.47
NUP88-202ENST00000570937 ZDHHC14Q8IZN3 488 aa5.88□□□□□ -1.47
NUP88-202ENST00000570937 CISD2Q8N5K1 135 aaKnown RBP5.88□□□□□ -1.47
NUP88-202ENST00000570937 IGSF22Q8N9C0 903 aa5.88□□□□□ -1.47
NUP88-202ENST00000570937 ZCCHC14Q8WYQ9 949 aaKnown RBP5.88□□□□□ -1.47
NUP88-202ENST00000570937 YTHDC1Q96MU7 727 aaKnown RBP5.88□□□□□ -1.47
NUP88-202ENST00000570937 KCND1Q9NSA2 647 aa5.88□□□□□ -1.47
NUP88-202ENST00000570937 RIC8BQ9NVN3 520 aa5.88□□□□□ -1.47
NUP88-202ENST00000570937 CROTQ9UKG9 612 aa5.88□□□□□ -1.47
NUP88-202ENST00000570937 MAPKBP1O60336 1514 aa5.88□□□□□ -1.47
NUP88-202ENST00000570937 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.87□□□□□ -1.47
NUP88-202ENST00000570937 MROH6A6NGR9 719 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 MECP2P51608 486 aaKnown RBP5.87□□□□□ -1.47
NUP88-202ENST00000570937 KIAA2012Q0VF49 1180 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 PABPC4Q13310 644 aaKnown RBP eCLIP5.87□□□□□ -1.47
NUP88-202ENST00000570937 SMAD2Q15796 467 aaKnown RBP5.87□□□□□ -1.47
NUP88-202ENST00000570937 PRAMEF18Q5VWM3 479 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 C16orf86Q6ZW13 317 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 DDX53Q86TM3 631 aaKnown RBP5.87□□□□□ -1.47
NUP88-202ENST00000570937 NOP9Q86U38 636 aaKnown RBP5.87□□□□□ -1.47
NUP88-202ENST00000570937 CXorf38Q8TB03 319 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 APPBP2Q92624 585 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 DLG3Q92796 817 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 L2HGDHQ9H9P8 463 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 USP40Q9NVE5 1235 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 INTS7Q9NVH2 962 aaKnown RBP5.87□□□□□ -1.47
NUP88-202ENST00000570937 ARHGAP20Q9P2F6 1191 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 ZFP69BQ9UJL9 534 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 TNPO3Q9Y5L0 923 aaKnown RBP5.87□□□□□ -1.47
NUP88-202ENST00000570937 PLB1Q6P1J6 1458 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 ADCY10Q96PN6 1610 aa5.87□□□□□ -1.47
NUP88-202ENST00000570937 EFCAB5A4FU69 1503 aa5.86□□□□□ -1.47
NUP88-202ENST00000570937 ABCC10Q5T3U5 1492 aa5.86□□□□□ -1.47
NUP88-202ENST00000570937 SLC12A8A0AV02 714 aa5.86□□□□□ -1.47
NUP88-202ENST00000570937 KNG1P01042 644 aa5.86□□□□□ -1.47
NUP88-202ENST00000570937 AOAHP28039 575 aa5.86□□□□□ -1.47
NUP88-202ENST00000570937 NFIXQ14938 502 aa5.86□□□□□ -1.47
NUP88-202ENST00000570937 SEC23AQ15436 765 aa5.86□□□□□ -1.47
NUP88-202ENST00000570937 ARHGAP44Q17R89 818 aa5.86□□□□□ -1.47
NUP88-202ENST00000570937 JAZF1Q86VZ6 243 aa5.86□□□□□ -1.47
NUP88-202ENST00000570937 LCORQ96JN0 433 aaPredicted RBP5.86□□□□□ -1.47
NUP88-202ENST00000570937 KCNH7Q9NS40 1196 aa5.86□□□□□ -1.47
NUP88-202ENST00000570937 BTBD7Q9P203 1132 aa5.86□□□□□ -1.47
NUP88-202ENST00000570937 MAGEC2Q9UBF1 373 aaPredicted RBP5.86□□□□□ -1.47
NUP88-202ENST00000570937 B3GALT1Q9Y5Z6 326 aa5.86□□□□□ -1.47
NUP88-202ENST00000570937 KDM5BQ9UGL1 1544 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 KCNK3O14649 394 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 OPA1O60313 960 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 KLHL18O94889 574 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 IL18BPO95998 194 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 ZBTB48P10074 688 aaPredicted RBP5.85□□□□□ -1.47
NUP88-202ENST00000570937 SDSP20132 328 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 SDHAP31040 664 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 CPZQ66K79 652 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 FSTL4Q6MZW2 842 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 TRMT10BQ6PF06 316 aaKnown RBP5.85□□□□□ -1.47
NUP88-202ENST00000570937 FAM124AQ86V42 546 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 C2orf69Q8N8R5 385 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 RELTQ969Z4 430 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 MBD6Q96DN6 1003 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 TMEM168Q9H0V1 697 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 ADAM7Q9H2U9 754 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 SLC39A2Q9NP94 309 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 FANCLQ9NW38 375 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 SAMD15Q9P1V8 674 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 USP35Q9P2H5 1018 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 FTSJ1Q9UET6 329 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 MRPL42Q9Y6G3 142 aaKnown RBP5.85□□□□□ -1.47
NUP88-202ENST00000570937 DUSP10Q9Y6W6 482 aa5.85□□□□□ -1.47
NUP88-202ENST00000570937 FMN1Q68DA7 1419 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 PLEKHD1A6NEE1 506 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 SCDO00767 359 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 GLRX3O76003 335 aaKnown RBP5.84□□□□□ -1.47
NUP88-202ENST00000570937 FBXO21O94952 628 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 PTGS1P23219 599 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 GLRBP48167 497 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 ZNF460Q14592 562 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 TKFCQ3LXA3 575 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 TM4SF20Q53R12 229 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 PHF19Q5T6S3 580 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 PKN3Q6P5Z2 889 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 BORAQ6PGQ7 559 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 LGI4Q8N135 537 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 KLHL36Q8N4N3 616 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 STPG3Q8N7X2 389 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 CHST14Q8NCH0 376 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 ORAI3Q9BRQ5 295 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 BOCQ9BWV1 1114 aa5.84□□□□□ -1.47
NUP88-202ENST00000570937 ARHGAP28Q9P2N2 729 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms