RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 ZMYND12Q9H0C1 365 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 CYP46A1Q9Y6A2 500 aa14.08□□□□□ -0.16
CTDNEP1-205ENST00000570828 LCHNA4D1U4 455 aa14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 MEIS1O00470 390 aa14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 ARHGEF15O94989 841 aa14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 ARP10275 920 aa14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 IFNAR1P17181 557 aa14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 PDIA3P30101 505 aaKnown RBP14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 IGBP1P78318 339 aa14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 CCT2P78371 535 aaKnown RBP14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 ITGB3BPQ13352 177 aaPredicted RBP14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 CCDC85BQ15834 202 aaPredicted RBP14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 PKN1Q16512 942 aa14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 FAM117BQ6P1L5 589 aa14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 RUFY4Q6ZNE9 571 aa14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 MYOCDQ8IZQ8 938 aa14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 BICD2Q8TD16 824 aa14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 COL25A1Q9BXS0 654 aaPredicted RBP14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 NCOA5Q9HCD5 579 aaKnown RBP14.07□□□□□ -0.16
CTDNEP1-205ENST00000570828 TET1Q8NFU7 2136 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 TRANK1O15050 2925 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 RRN3P2A6NIE6 340 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 DDX39AO00148 427 aaKnown RBP14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 CPLX1O14810 134 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 PPFIA3O75145 1194 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 RPLP2P05387 115 aaKnown RBP14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 EVCP57679 992 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 SETQ01105 290 aaPredicted RBP14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 NTRK3Q16288 839 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 RPAINQ86UA6 219 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 PLA2G4DQ86XP0 818 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 TRIM22Q8IYM9 498 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 APBB2Q92870 758 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 PCYT2Q99447 389 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 IFIH1Q9BYX4 1025 aaKnown RBP14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 UPF3BQ9BZI7 483 aaKnown RBP14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 PPP4R2Q9NY27 417 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 THEGQ9P2T0 379 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 TCEAL9Q9UHQ7 104 aa14.06□□□□□ -0.16
CTDNEP1-205ENST00000570828 MBLAC1A4D2B0 266 aaPredicted RBP14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 EPOPA6NHQ4 379 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 FAM86B1E9PN63 330 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 RFXAPO00287 272 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 BACH1O14867 736 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 CYP3A4P08684 503 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 FAM86B2P0C5J1 330 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 INSRRP14616 1297 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 STAT5BP51692 787 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 TOB2Q14106 344 aaPredicted RBP14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 NBR1Q14596 966 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 FAM26DQ5JW98 314 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 PLPPR4Q7Z2D5 763 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 CRYGNQ8WXF5 182 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 TM6SF1Q9BZW5 370 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 VPS54Q9P1Q0 977 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 INSL6Q9Y581 213 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 GBF1Q92538 1859 aa14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 TRIP12Q14669 1992 aaPredicted RBP14.05□□□□□ -0.16
CTDNEP1-205ENST00000570828 DOCK5Q9H7D0 1870 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 IGLV3-22A0A075B6J6 115 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 RBAK-RBAKDNI3L0D1 243 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 IPO5O00410 1097 aaKnown RBP14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 CHRNA1P02708 482 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 GHRP10912 638 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 SLC26A2P50443 739 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 PLCB4Q15147 1175 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 SKIV2LQ15477 1246 aaKnown RBP14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 TJAP1Q5JTD0 557 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 MARCH8Q5T0T0 291 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 ERICH6BQ5W0A0 696 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 FAM160B1Q5W0V3 765 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 CPLX2Q6PUV4 134 aaKnown RBP14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 RASGRP4Q8TDF6 673 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 DNAJB3Q8WWF6 145 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 SYMPKQ92797 1274 aaKnown RBP14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 TGS1Q96RS0 853 aaKnown RBP14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 ZNF577Q9BSK1 485 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 FAM49AQ9H0Q0 323 aaPredicted RBP14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 PRDM6Q9NQX0 595 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 MTUS1Q9ULD2 1270 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 MTCH2Q9Y6C9 303 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 TTC28Q96AY4 2481 aa14.04□□□□□ -0.16
CTDNEP1-205ENST00000570828 LINC01553A4QN01 128 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 M0QZ92 97 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 TK2O00142 265 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 ADAMTS3O15072 1205 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 ATG7O95352 703 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 CCNE2O96020 404 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 POU3F3P20264 500 aaPredicted RBP14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 NLRP5P59047 1200 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 SSRP1Q08945 709 aaKnown RBP14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 MGAT3Q09327 533 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 PRR16Q569H4 304 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 MIS18BP1Q6P0N0 1132 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 SPRED2Q7Z698 418 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 GDPD5Q8WTR4 605 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 ATXN2LQ8WWM7 1075 aaKnown RBP14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 ZNF274Q96GC6 653 aaPredicted RBP14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 YME1L1Q96TA2 773 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms