RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 POTEBQ6S5H4 581 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 MTHFD1LQ6UB35 978 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.13□□□□□ -1.43
CHD3-212ENST00000570758 MYOCDQ8IZQ8 938 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 NSUN7Q8NE18 718 aaKnown RBP6.13□□□□□ -1.43
CHD3-212ENST00000570758 OXER1Q8TDS5 423 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 ATP8B4Q8TF62 1192 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 PPM1EQ8WY54 764 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 ARNTL2Q8WYA1 636 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 SLC5A5Q92911 643 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 GTF3C6Q969F1 213 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 MBOAT7Q96N66 472 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 GAS2L1Q99501 681 aaPredicted RBP6.13□□□□□ -1.43
CHD3-212ENST00000570758 ZBED2Q9BTP6 218 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 PHF20Q9BVI0 1012 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 IFIH1Q9BYX4 1025 aaKnown RBP6.13□□□□□ -1.43
CHD3-212ENST00000570758 UNC45AQ9H3U1 944 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 AGO3Q9H9G7 860 aaKnown RBP6.13□□□□□ -1.43
CHD3-212ENST00000570758 PRDM6Q9NQX0 595 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 ZNF302Q9NR11 478 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 TBC1D22BQ9NU19 505 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 ORC3Q9UBD5 711 aaPredicted RBP6.13□□□□□ -1.43
CHD3-212ENST00000570758 GABBR1Q9UBS5 961 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 PCDHA2Q9Y5H9 948 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 TRPV2Q9Y5S1 764 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 SIP14410 1827 aa6.13□□□□□ -1.43
CHD3-212ENST00000570758 CYP3A7-CYP3A51PA0A087WV96 503 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 SMIM35A0A1B0GVV1 85 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 LINC01553A4QN01 128 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 FAM205CA6NFA0 338 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 SLC37A4O43826 429 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 GAS7O60861 476 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 PSMD10O75832 226 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 AMHP03971 560 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 PSAPP07602 524 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 COL1A2P08123 1366 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 CYP3A7P24462 503 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 CD52P31358 61 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 SLC26A2P50443 739 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 NEK4P51957 841 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 FOSBP53539 338 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 HTRA4P83105 476 aaPredicted RBP6.12□□□□□ -1.43
CHD3-212ENST00000570758 GRB10Q13322 594 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 NONOQ15233 471 aaKnown RBP eCLIP6.12□□□□□ -1.43
CHD3-212ENST00000570758 CCDC85BQ15834 202 aaPredicted RBP6.12□□□□□ -1.43
CHD3-212ENST00000570758 INF2Q27J81 1249 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 Q4G0T1 1027 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 LRCH2Q5VUJ6 765 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 GALNT17Q6IS24 598 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 B3GNT9Q6UX72 402 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 TSHZ1Q6ZSZ6 1077 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 MICAL3Q7RTP6 2002 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 TRMT1LQ7Z2T5 733 aaKnown RBP6.12□□□□□ -1.43
CHD3-212ENST00000570758 KRT25Q7Z3Z0 450 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 RSPH3Q86UC2 560 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 CKAP2LQ8IYA6 745 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 SMAP1Q8IYB5 467 aaPredicted RBP6.12□□□□□ -1.43
CHD3-212ENST00000570758 FAM177A1Q8N128 213 aaPredicted RBP6.12□□□□□ -1.43
CHD3-212ENST00000570758 ETNPPLQ8TBG4 499 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 LINC01599Q8WXQ3 324 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 KAT6AQ92794 2004 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 RIT2Q99578 217 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 RAD9AQ99638 391 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 KIF2CQ99661 725 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 TEKT3Q9BXF9 490 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 C22orf23Q9BZE7 217 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 CDHR5Q9HBB8 845 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 IGSF9BQ9UPX0 1349 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 PCDHA10Q9Y5I2 948 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 MAFBQ9Y5Q3 323 aaPredicted RBP6.12□□□□□ -1.43
CHD3-212ENST00000570758 MTCH2Q9Y6C9 303 aa6.12□□□□□ -1.43
CHD3-212ENST00000570758 CCDC194A0A1B0GVG4 234 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 WDR64B1ANS9 1081 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 EML1O00423 815 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 WNT7AO00755 349 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 ENPP3O14638 875 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 CHMP2AO43633 222 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 LPXNO60711 386 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 UPP2O95045 317 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 STBD1O95210 358 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 C22orf31O95567 290 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 OATP04181 439 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 CLCN3P51790 818 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 ERVK-21P61565 698 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 PRKCEQ02156 737 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 NR5A1Q13285 461 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 TMEM266Q2M3C6 531 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 LETM2Q2VYF4 491 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 ZNF484Q5JVG2 852 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 IER5Q5VY09 327 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 MOXD1Q6UVY6 613 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 PIK3AP1Q6ZUJ8 805 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 RTN4RL1Q86UN2 441 aaPredicted RBP6.11□□□□□ -1.43
CHD3-212ENST00000570758 KIAA0319LQ8IZA0 1049 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 MICALL1Q8N3F8 863 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 LINC01465Q8N7H1 131 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 SP7Q8TDD2 431 aaPredicted RBP6.11□□□□□ -1.43
CHD3-212ENST00000570758 GDPD5Q8WTR4 605 aa6.11□□□□□ -1.43
CHD3-212ENST00000570758 BBXQ8WY36 941 aaPredicted RBP6.11□□□□□ -1.43
CHD3-212ENST00000570758 APBB2Q92870 758 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms