RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CUTAO60888 179 aa17.97■□□□□ 0.47
USB1-215ENST00000569252 ASGR1P07306 291 aa17.97■□□□□ 0.47
USB1-215ENST00000569252 PTGS1P23219 599 aa17.97■□□□□ 0.47
USB1-215ENST00000569252 SLC26A2P50443 739 aa17.97■□□□□ 0.47
USB1-215ENST00000569252 GRIN2CQ14957 1233 aa17.97■□□□□ 0.47
USB1-215ENST00000569252 PDXDC2PQ6P474 469 aa17.97■□□□□ 0.47
USB1-215ENST00000569252 PLPPR4Q7Z2D5 763 aa17.97■□□□□ 0.47
USB1-215ENST00000569252 LEO1Q8WVC0 666 aaPredicted RBP17.97■□□□□ 0.47
USB1-215ENST00000569252 NRBP2Q9NSY0 501 aa17.97■□□□□ 0.47
USB1-215ENST00000569252 ERAP1Q9NZ08 941 aa17.97■□□□□ 0.47
USB1-215ENST00000569252 GABBR1Q9UBS5 961 aa17.97■□□□□ 0.47
USB1-215ENST00000569252 PHF24Q9UPV7 400 aa17.97■□□□□ 0.47
USB1-215ENST00000569252 A0A1W2PQ45 241 aaPredicted RBP17.96■□□□□ 0.47
USB1-215ENST00000569252 A0A1W2PQY0 241 aa17.96■□□□□ 0.47
USB1-215ENST00000569252 POTEMA6NI47 508 aa17.96■□□□□ 0.47
USB1-215ENST00000569252 H3BRB1 525 aa17.96■□□□□ 0.47
USB1-215ENST00000569252 QARSP47897 775 aaKnown RBP17.96■□□□□ 0.47
USB1-215ENST00000569252 ACLYP53396 1101 aa17.96■□□□□ 0.47
USB1-215ENST00000569252 PSMC5P62195 406 aa17.96■□□□□ 0.47
USB1-215ENST00000569252 ZRSR1Q15695 479 aaKnown RBP17.96■□□□□ 0.47
USB1-215ENST00000569252 TPH2Q8IWU9 490 aa17.96■□□□□ 0.47
USB1-215ENST00000569252 IGSF22Q8N9C0 903 aa17.96■□□□□ 0.47
USB1-215ENST00000569252 CALML4Q96GE6 196 aa17.96■□□□□ 0.47
USB1-215ENST00000569252 EIF2AK1Q9BQI3 630 aaKnown RBP17.96■□□□□ 0.47
USB1-215ENST00000569252 TUT1Q9H6E5 874 aaKnown RBP17.96■□□□□ 0.47
USB1-215ENST00000569252 ZSWIM4Q9H7M6 989 aa17.96■□□□□ 0.47
USB1-215ENST00000569252 CCDC39Q9UFE4 941 aa17.96■□□□□ 0.47
USB1-215ENST00000569252 GRXCR1A8MXD5 290 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 GOLGA6L22H0YM25 854 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 EML1O00423 815 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 LGALS2P05162 132 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 CLTBP09497 229 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 CCT6AP40227 531 aaKnown RBP17.95■□□□□ 0.46
USB1-215ENST00000569252 IL17AQ16552 155 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 B3GNT9Q6UX72 402 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 CXCL17Q6UXB2 119 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 OTUD6AQ7L8S5 288 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 ZNF579Q8NAF0 562 aaKnown RBP17.95■□□□□ 0.46
USB1-215ENST00000569252 SNX29Q8TEQ0 813 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 CSRNP2Q9H175 543 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 TUFT1Q9NNX1 390 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 FAM13BQ9NYF5 915 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 RAPGEFL1Q9UHV5 662 aa17.95■□□□□ 0.46
USB1-215ENST00000569252 FBXO2Q9UK22 296 aaPredicted RBP17.95■□□□□ 0.46
USB1-215ENST00000569252 SLC26A4O43511 780 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 LGR5O75473 907 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 ZNF286BP0CG31 522 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 SMAD3P84022 425 aaKnown RBP17.94■□□□□ 0.46
USB1-215ENST00000569252 PURAQ00577 322 aaKnown RBP17.94■□□□□ 0.46
USB1-215ENST00000569252 CYP4A11Q02928 519 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 SPIRE1Q08AE8 756 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 CABP7Q86V35 215 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 BANK1Q8NDB2 785 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 AFAP1L1Q8TED9 768 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 PPM1EQ8WY54 764 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 DYDC2Q96IM9 177 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 FAM167AQ96KS9 214 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 CCDC43Q96MW1 224 aaKnown RBP17.94■□□□□ 0.46
USB1-215ENST00000569252 CLIC6Q96NY7 704 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 POLR3CQ9BUI4 534 aaPredicted RBP17.94■□□□□ 0.46
USB1-215ENST00000569252 SEZ6LQ9BYH1 1024 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 STARD7Q9NQZ5 370 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 PCDHA7Q9UN72 937 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 EMSYQ7Z589 1322 aa17.94■□□□□ 0.46
USB1-215ENST00000569252 IGKV6D-21A0A0A0MT36 114 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 CTAGE5O15320 804 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 SLITRK3O94933 977 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 HOXD8P13378 290 aaPredicted RBP17.93■□□□□ 0.46
USB1-215ENST00000569252 RAG1P15918 1043 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 MUTP22033 750 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 MARK3P27448 753 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 RPA1P27694 616 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 PBX2P40425 430 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 PSEN2P49810 448 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 FAAP100Q0VG06 881 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 MFSD10Q14728 455 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 TPRNQ4KMQ1 711 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 ADALQ6DHV7 355 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 CCSAPQ6IQ19 270 aaPredicted RBP17.93■□□□□ 0.46
USB1-215ENST00000569252 TRMT1LQ7Z2T5 733 aaKnown RBP17.93■□□□□ 0.46
USB1-215ENST00000569252 C7orf31Q8N865 590 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 NT5C3AQ9H0P0 336 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 GDPD2Q9HCC8 539 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 TMEM39AQ9NV64 488 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 RGL1Q9NZL6 768 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 TRPC6Q9Y210 931 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 MAFBQ9Y5Q3 323 aaPredicted RBP17.93■□□□□ 0.46
USB1-215ENST00000569252 KDM3AQ9Y4C1 1321 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 MYO9BQ13459 2157 aa17.93■□□□□ 0.46
USB1-215ENST00000569252 POTEB3A0JP26 581 aa17.92■□□□□ 0.46
USB1-215ENST00000569252 DDX11L8A8MPP1 907 aa17.92■□□□□ 0.46
USB1-215ENST00000569252 RBAK-RBAKDNI3L0D1 243 aa17.92■□□□□ 0.46
USB1-215ENST00000569252 GNAT1P11488 350 aa17.92■□□□□ 0.46
USB1-215ENST00000569252 CTTNQ14247 550 aaKnown RBP17.92■□□□□ 0.46
USB1-215ENST00000569252 KIAA0753Q2KHM9 967 aa17.92■□□□□ 0.46
USB1-215ENST00000569252 SPECC1Q5M775 1068 aa17.92■□□□□ 0.46
USB1-215ENST00000569252 POTEBQ6S5H4 581 aa17.92■□□□□ 0.46
USB1-215ENST00000569252 CCDC60Q8IWA6 550 aaPredicted RBP17.92■□□□□ 0.46
USB1-215ENST00000569252 CHAMP1Q96JM3 812 aa17.92■□□□□ 0.46
USB1-215ENST00000569252 NACC1Q96RE7 527 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms