RNA–Protein interactions for RNA: ENST00000569248.5

STUB1-211, Transcript of STIP1 homology and U-box containing protein 1, human

TSL 5

Gene STUB1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STUB1-211	ENST00000569248	RPL13	P26373	211 aa	Known RBP	32.46	■■■□□ 2.79
STUB1-211	ENST00000569248	CCND2	P30279	289 aa		32.46	■■■□□ 2.79
STUB1-211	ENST00000569248	PRKG1	Q13976	671 aa		32.46	■■■□□ 2.79
STUB1-211	ENST00000569248	TMEM132B	Q14DG7	1078 aa		32.46	■■■□□ 2.79
STUB1-211	ENST00000569248	RNF181	Q9P0P0	153 aa		32.46	■■■□□ 2.79
STUB1-211	ENST00000569248	KIF5C	O60282	957 aa		32.46	■■■□□ 2.79
STUB1-211	ENST00000569248	STXBP4	Q6ZWJ1	553 aa		32.46	■■■□□ 2.79
STUB1-211	ENST00000569248	FRMD5	Q7Z6J6	570 aa		32.46	■■■□□ 2.79
STUB1-211	ENST00000569248	CCDC170	Q8IYT3	715 aa		32.46	■■■□□ 2.79
STUB1-211	ENST00000569248	ERO1A	Q96HE7	468 aa		32.46	■■■□□ 2.79
STUB1-211	ENST00000569248	MYH11	P35749	1972 aa		32.45	■■■□□ 2.79
STUB1-211	ENST00000569248	SFI1	A8K8P3	1242 aa		32.45	■■■□□ 2.79
STUB1-211	ENST00000569248	HNRNPH3	P31942	346 aa	Known RBP	32.45	■■■□□ 2.79
STUB1-211	ENST00000569248	QARS	P47897	775 aa	Known RBP	32.45	■■■□□ 2.79
STUB1-211	ENST00000569248	ARHGAP29	Q52LW3	1261 aa		32.45	■■■□□ 2.79
STUB1-211	ENST00000569248	VSIG10L	Q86VR7	867 aa		32.45	■■■□□ 2.79
STUB1-211	ENST00000569248	SULF1	Q8IWU6	871 aa		32.45	■■■□□ 2.79
STUB1-211	ENST00000569248	DBR1	Q9UK59	544 aa	Known RBP	32.45	■■■□□ 2.79
STUB1-211	ENST00000569248	SAMM50	Q9Y512	469 aa		32.45	■■■□□ 2.79
STUB1-211	ENST00000569248	UBE4B	O95155	1302 aa		32.45	■■■□□ 2.79
STUB1-211	ENST00000569248	MAFG	O15525	162 aa		32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	LYPLA2	O95372	231 aa		32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	CYLC1	P35663	651 aa	Predicted RBP	32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	NEK11	Q8NG66	645 aa		32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	WDR24	Q96S15	920 aa		32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	FAM207A	Q9NSI2	230 aa	Predicted RBP	32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	TCEAL9	Q9UHQ7	104 aa		32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	SNCAIP	Q9Y6H5	919 aa		32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	JAK3	P52333	1124 aa		32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	PPP2R3A	Q06190	1150 aa		32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	NSUN6	Q8TEA1	469 aa	Known RBP	32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	ACAD9	Q9H845	621 aa		32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	ZNF215	Q9UL58	517 aa	Predicted RBP	32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	PLAGL2	Q9UPG8	496 aa		32.44	■■■□□ 2.78
STUB1-211	ENST00000569248	WDR90	Q96KV7	1748 aa		32.43	■■■□□ 2.78
STUB1-211	ENST00000569248	PPP1R12B	O60237	982 aa	Predicted RBP	32.43	■■■□□ 2.78
STUB1-211	ENST00000569248	NR3C2	P08235	984 aa		32.43	■■■□□ 2.78
STUB1-211	ENST00000569248	SFN	P31947	248 aa		32.43	■■■□□ 2.78
STUB1-211	ENST00000569248	RBM10	P98175	930 aa	Known RBP	32.43	■■■□□ 2.78
STUB1-211	ENST00000569248	KRT76	Q01546	638 aa		32.43	■■■□□ 2.78
STUB1-211	ENST00000569248	VGLL4	Q14135	290 aa		32.43	■■■□□ 2.78
STUB1-211	ENST00000569248	NLRX1	Q86UT6	975 aa		32.43	■■■□□ 2.78
STUB1-211	ENST00000569248	GPRASP2	Q96D09	838 aa		32.43	■■■□□ 2.78
STUB1-211	ENST00000569248	POLD4	Q9HCU8	107 aa		32.43	■■■□□ 2.78
STUB1-211	ENST00000569248	FANCG	O15287	622 aa		32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	URI1	O94763	535 aa	Predicted RBP	32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	ERCC3	P19447	782 aa		32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	KRT83	P78385	493 aa		32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	CSAD	Q9Y600	493 aa		32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	TESPA1	A2RU30	521 aa	Predicted RBP	32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	SPDYE16	A6NNV3	312 aa	Predicted RBP	32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	KCNMA1	Q12791	1236 aa		32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	ZNF720	Q7Z2F6	126 aa		32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	FAM178B	Q8IXR5	827 aa		32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	PURB	Q96QR8	312 aa	Known RBP	32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	METTL14	Q9HCE5	456 aa	Known RBP	32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	ARMCX3	Q9UH62	379 aa	Predicted RBP	32.42	■■■□□ 2.78
STUB1-211	ENST00000569248	ASTN1	O14525	1302 aa		32.41	■■■□□ 2.78
STUB1-211	ENST00000569248	SLC16A3	O15427	465 aa	Known RBP	32.41	■■■□□ 2.78
STUB1-211	ENST00000569248	NR3C1	P04150	777 aa		32.41	■■■□□ 2.78
STUB1-211	ENST00000569248	NFIL3	Q16649	462 aa		32.41	■■■□□ 2.78
STUB1-211	ENST00000569248	PADI6	Q6TGC4	694 aa		32.41	■■■□□ 2.78
STUB1-211	ENST00000569248	MTERF4	Q7Z6M4	381 aa	Known RBP	32.41	■■■□□ 2.78
STUB1-211	ENST00000569248	RDM1	Q8NG50	284 aa		32.41	■■■□□ 2.78
STUB1-211	ENST00000569248	BCAS3	Q9H6U6	928 aa		32.41	■■■□□ 2.78
STUB1-211	ENST00000569248	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	32.41	■■■□□ 2.78
STUB1-211	ENST00000569248	MYO1A	Q9UBC5	1043 aa		32.41	■■■□□ 2.78
STUB1-211	ENST00000569248	WDR64	B1ANS9	1081 aa		32.4	■■■□□ 2.78
STUB1-211	ENST00000569248	NMT1	P30419	496 aa	Known RBP	32.4	■■■□□ 2.78
STUB1-211	ENST00000569248	SMCR8	Q8TEV9	937 aa	Predicted RBP	32.4	■■■□□ 2.78
STUB1-211	ENST00000569248	FIZ1	Q96SL8	496 aa		32.4	■■■□□ 2.78
STUB1-211	ENST00000569248	PCDHB13	Q9Y5F0	798 aa		32.4	■■■□□ 2.78
STUB1-211	ENST00000569248	ATP9A	O75110	1047 aa		32.4	■■■□□ 2.78
STUB1-211	ENST00000569248	ODR4	Q5SWX8	454 aa		32.4	■■■□□ 2.78
STUB1-211	ENST00000569248	C4orf19	Q8IY42	314 aa		32.4	■■■□□ 2.78
STUB1-211	ENST00000569248	CYP39A1	Q9NYL5	469 aa		32.4	■■■□□ 2.78
STUB1-211	ENST00000569248	EPHB6	O15197	1021 aa		32.39	■■■□□ 2.78
STUB1-211	ENST00000569248	IPO7	O95373	1038 aa	Known RBP	32.39	■■■□□ 2.78
STUB1-211	ENST00000569248	ANKRD7	Q92527	254 aa		32.39	■■■□□ 2.78
STUB1-211	ENST00000569248	NUCKS1	Q9H1E3	243 aa	Known RBP	32.39	■■■□□ 2.78
STUB1-211	ENST00000569248	PTPRF	P10586	1907 aa		32.39	■■■□□ 2.78
STUB1-211	ENST00000569248		A0A0U1RQJ8	604 aa		32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	EIF3CL	B5ME19	914 aa	Known RBP	32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	HIP1R	O75146	1068 aa		32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	STAM2	O75886	525 aa		32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	PSMC5	P62195	406 aa		32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	NCBP1	Q09161	790 aa	Known RBP	32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	KCNH2	Q12809	1159 aa		32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	PLS1	Q14651	629 aa		32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	ZNF662	Q6ZS27	426 aa		32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	CACNA2D4	Q7Z3S7	1137 aa		32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	ZNF710	Q8N1W2	664 aa		32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	ATRIP	Q8WXE1	791 aa		32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	INPP4A	Q96PE3	977 aa	Predicted RBP	32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	MAP7D2	Q96T17	732 aa		32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	EIF3C	Q99613	913 aa	Known RBP	32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	CEP72	Q9P209	647 aa		32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	REXO2	Q9Y3B8	237 aa	Known RBP	32.38	■■■□□ 2.77
STUB1-211	ENST00000569248	TGFB1I1	O43294	461 aa		32.37	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms