RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 TDHQ8IZJ6 230 aa14.4□□□□□ -0.1
CDT1-203ENST00000569140 BBXQ8WY36 941 aaPredicted RBP14.4□□□□□ -0.1
CDT1-203ENST00000569140 NRBP2Q9NSY0 501 aa14.4□□□□□ -0.1
CDT1-203ENST00000569140 PCDHB6Q9Y5E3 794 aa14.4□□□□□ -0.1
CDT1-203ENST00000569140 TANC1Q9C0D5 1861 aa14.4□□□□□ -0.1
CDT1-203ENST00000569140 POTEMA6NI47 508 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 IQCF3P0C7M6 154 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 ATP4AP20648 1035 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 SYT1P21579 422 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 BMP8BP34820 402 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 TECP42680 631 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 EPHB4P54760 987 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 ORC2Q13416 577 aaPredicted RBP14.39□□□□□ -0.11
CDT1-203ENST00000569140 RILPL1Q5EBL4 403 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 ZNF484Q5JVG2 852 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 ZNF618Q5T7W0 954 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 RSPH3Q86UC2 560 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 RNPC3Q96LT9 517 aaKnown RBP14.39□□□□□ -0.11
CDT1-203ENST00000569140 IL23AQ9NPF7 189 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 CEP131Q9UPN4 1083 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 KAT6AQ92794 2004 aa14.39□□□□□ -0.11
CDT1-203ENST00000569140 MYH9P35579 1960 aaKnown RBP14.38□□□□□ -0.11
CDT1-203ENST00000569140 TRIP12Q14669 1992 aaPredicted RBP14.38□□□□□ -0.11
CDT1-203ENST00000569140 DDX11L8A8MPP1 907 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 ZBBXA8MT70 800 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 M0QZ92 97 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 ZNF862O60290 1169 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 DKC1O60832 514 aaKnown RBP eCLIP14.38□□□□□ -0.11
CDT1-203ENST00000569140 KLRC1P26715 233 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 HOXC8P31273 242 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 QARSP47897 775 aaKnown RBP14.38□□□□□ -0.11
CDT1-203ENST00000569140 TOB1P50616 345 aaPredicted RBP14.38□□□□□ -0.11
CDT1-203ENST00000569140 PSMC5P62195 406 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 CTTNQ14247 550 aaKnown RBP14.38□□□□□ -0.11
CDT1-203ENST00000569140 EPHA7Q15375 998 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 SHHQ15465 462 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 MTERF2Q49AM1 385 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 C9orf50Q5SZB4 431 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 FOXD4L5Q5VV16 416 aaPredicted RBP14.38□□□□□ -0.11
CDT1-203ENST00000569140 TAF2Q6P1X5 1199 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 PSRC1Q6PGN9 363 aaPredicted RBP14.38□□□□□ -0.11
CDT1-203ENST00000569140 MTHFD1LQ6UB35 978 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 TPH2Q8IWU9 490 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 RPUSD2Q8IZ73 545 aaKnown RBP14.38□□□□□ -0.11
CDT1-203ENST00000569140 METTL13Q8N6R0 699 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 DNAJB3Q8WWF6 145 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 FOXD4L4Q8WXT5 416 aaPredicted RBP14.38□□□□□ -0.11
CDT1-203ENST00000569140 DYDC2Q96IM9 177 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 CCDC43Q96MW1 224 aaKnown RBP14.38□□□□□ -0.11
CDT1-203ENST00000569140 MTMR9Q96QG7 549 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 LXNQ9BS40 222 aa14.38□□□□□ -0.11
CDT1-203ENST00000569140 COL1A2P08123 1366 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 TMEM150BA6NC51 233 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 RSPH10B2B2RC85 870 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 STX6O43752 255 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 P4HBP07237 508 aaKnown RBP14.37□□□□□ -0.11
CDT1-203ENST00000569140 RSPH10BP0C881 870 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 RFC2P35250 354 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 ADAM17P78536 824 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 TMEM62Q0P6H9 643 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 PTGDRQ13258 359 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 BECN1Q14457 450 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 TRIM71Q2Q1W2 868 aaKnown RBP14.37□□□□□ -0.11
CDT1-203ENST00000569140 HABP4Q5JVS0 413 aaKnown RBP14.37□□□□□ -0.11
CDT1-203ENST00000569140 MARCH8Q5T0T0 291 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 PLA2G4FQ68DD2 849 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 B3GNT9Q6UX72 402 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 ZNF365Q70YC5 407 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 OTOP2Q7RTS6 562 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 BRAPQ7Z569 592 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 ERMNQ8TAM6 284 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 PPP1R16BQ96T49 567 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 EIF2AK1Q9BQI3 630 aaKnown RBP14.37□□□□□ -0.11
CDT1-203ENST00000569140 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.37□□□□□ -0.113e-7■■■□□ 15.4
CDT1-203ENST00000569140 SH2D3AQ9BRG2 576 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 RGL1Q9NZL6 768 aa14.37□□□□□ -0.11
CDT1-203ENST00000569140 SCN5AQ14524 2016 aa14.36□□□□□ -0.11
CDT1-203ENST00000569140 MBLAC1A4D2B0 266 aaPredicted RBP14.36□□□□□ -0.11
CDT1-203ENST00000569140 FGBP02675 491 aa14.36□□□□□ -0.11
CDT1-203ENST00000569140 ACTN1P12814 892 aa14.36□□□□□ -0.11
CDT1-203ENST00000569140 SPIRE1Q08AE8 756 aa14.36□□□□□ -0.11
CDT1-203ENST00000569140 TBC1D8BQ0IIM8 1120 aa14.36□□□□□ -0.11
CDT1-203ENST00000569140 XKR3Q5GH77 459 aa14.36□□□□□ -0.11
CDT1-203ENST00000569140 MTIF3Q9H2K0 278 aaKnown RBP14.36□□□□□ -0.11
CDT1-203ENST00000569140 PRO3102Q9H379 93 aa14.36□□□□□ -0.11
CDT1-203ENST00000569140 SUGCTQ9HAC7 445 aa14.36□□□□□ -0.11
CDT1-203ENST00000569140 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.36□□□□□ -0.11
CDT1-203ENST00000569140 GINS2Q9Y248 185 aa14.36□□□□□ -0.11
CDT1-203ENST00000569140 PCDHA2Q9Y5H9 948 aa14.36□□□□□ -0.11
CDT1-203ENST00000569140 A0A1W2PPC1 479 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 RBAK-RBAKDNI3L0D1 243 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 CAND2O75155 1236 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 PARNO95453 639 aaKnown RBP14.35□□□□□ -0.11
CDT1-203ENST00000569140 C22orf31O95567 290 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 PFKMP08237 780 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 CLCN3P51790 818 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 RBL2Q08999 1139 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 TMEM240Q5SV17 173 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 LRRC71Q8N4P6 559 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 NEK9Q8TD19 979 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms