RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 UBIAD1Q9Y5Z9 338 aa17.06■□□□□ 0.32
USB1-214ENST00000568848 DDX39AO00148 427 aaKnown RBP17.05■□□□□ 0.32
USB1-214ENST00000568848 CHMLP26374 656 aa17.05■□□□□ 0.32
USB1-214ENST00000568848 MTMR1Q13613 665 aa17.05■□□□□ 0.32
USB1-214ENST00000568848 PLCB4Q15147 1175 aa17.05■□□□□ 0.32
USB1-214ENST00000568848 FAM102BQ5T8I3 360 aa17.05■□□□□ 0.32
USB1-214ENST00000568848 NPAS4Q8IUM7 802 aa17.05■□□□□ 0.32
USB1-214ENST00000568848 CMTR2Q8IYT2 770 aaKnown RBP17.05■□□□□ 0.32
USB1-214ENST00000568848 SMRP1Q8NCR6 262 aa17.05■□□□□ 0.32
USB1-214ENST00000568848 TMEM40Q8WWA1 233 aa17.05■□□□□ 0.32
USB1-214ENST00000568848 GPRASP2Q96D09 838 aa17.05■□□□□ 0.32
USB1-214ENST00000568848 MFSD14AQ96MC6 490 aa17.05■□□□□ 0.32
USB1-214ENST00000568848 SPZ1Q9BXG8 430 aa17.05■□□□□ 0.32
USB1-214ENST00000568848 RWDD3Q9Y3V2 267 aa17.05■□□□□ 0.32
USB1-214ENST00000568848 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
USB1-214ENST00000568848 FNDC1Q4ZHG4 1894 aaPredicted RBP17.05■□□□□ 0.32
USB1-214ENST00000568848 PIK3CDO00329 1044 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 NCK2O43639 380 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 EYA4O95677 639 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 ARP10275 920 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 SCG2P13521 617 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 PBX3P40426 434 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 ERVFC1P60507 584 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 ZXDAP98168 799 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 NFX1Q12986 1120 aaKnown RBP17.04■□□□□ 0.32
USB1-214ENST00000568848 PAK2Q13177 524 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 TYW1BQ6NUM6 668 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 RSPH3Q86UC2 560 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 EFHBQ8N7U6 833 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 POP1Q99575 1024 aaKnown RBP17.04■□□□□ 0.32
USB1-214ENST00000568848 PLVAPQ9BX97 442 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 SMOC2Q9H3U7 446 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 SMARCAD1Q9H4L7 1026 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 PSTPIP2Q9H939 334 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 PCDHA6Q9UN73 950 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 PCDHA8Q9Y5H6 950 aa17.04■□□□□ 0.32
USB1-214ENST00000568848 RBM8AQ9Y5S9 174 aaKnown RBP17.04■□□□□ 0.32
USB1-214ENST00000568848 TBKBP1A7MCY6 615 aa17.03■□□□□ 0.32
USB1-214ENST00000568848 LOC730098B7Z3J9 87 aa17.03■□□□□ 0.32
USB1-214ENST00000568848 PRC1O43663 620 aa17.03■□□□□ 0.32
USB1-214ENST00000568848 FGFR1P11362 822 aa17.03■□□□□ 0.32
USB1-214ENST00000568848 ITGB3BPQ13352 177 aaPredicted RBP17.03■□□□□ 0.32
USB1-214ENST00000568848 SPOUT1Q5T280 376 aaKnown RBP17.03■□□□□ 0.32
USB1-214ENST00000568848 LLGL2Q6P1M3 1020 aa17.03■□□□□ 0.32
USB1-214ENST00000568848 TRMT1LQ7Z2T5 733 aaKnown RBP17.03■□□□□ 0.32
USB1-214ENST00000568848 CTCFLQ8NI51 663 aaPredicted RBP17.03■□□□□ 0.32
USB1-214ENST00000568848 FEZF2Q8TBJ5 459 aa17.03■□□□□ 0.32
USB1-214ENST00000568848 MICAL1Q8TDZ2 1067 aa17.03■□□□□ 0.32
USB1-214ENST00000568848 TLE6Q9H808 572 aa17.03■□□□□ 0.32
USB1-214ENST00000568848 JPH1Q9HDC5 661 aaPredicted RBP17.03■□□□□ 0.32
USB1-214ENST00000568848 JADE2Q9NQC1 790 aa17.03■□□□□ 0.32
USB1-214ENST00000568848 TMEM260Q9NX78 707 aa17.03■□□□□ 0.32
USB1-214ENST00000568848 SEC63Q9UGP8 760 aaKnown RBP17.03■□□□□ 0.32
USB1-214ENST00000568848 NOC2LQ9Y3T9 749 aaKnown RBP17.03■□□□□ 0.32
USB1-214ENST00000568848 EVPLQ92817 2033 aa17.03■□□□□ 0.32
USB1-214ENST00000568848 IGSF9BQ9UPX0 1349 aa17.02■□□□□ 0.32
USB1-214ENST00000568848 SH2B2O14492 632 aaPredicted RBP17.02■□□□□ 0.32
USB1-214ENST00000568848 ADAMTS3O15072 1205 aa17.02■□□□□ 0.32
USB1-214ENST00000568848 ACTR2P61160 394 aa17.02■□□□□ 0.32
USB1-214ENST00000568848 COASYQ13057 564 aa17.02■□□□□ 0.32
USB1-214ENST00000568848 TRAF1Q13077 416 aa17.02■□□□□ 0.32
USB1-214ENST00000568848 PLPP4Q5VZY2 271 aa17.02■□□□□ 0.32
USB1-214ENST00000568848 NFXL1Q6ZNB6 911 aa17.02■□□□□ 0.32
USB1-214ENST00000568848 HEATR3Q7Z4Q2 680 aa17.02■□□□□ 0.32
USB1-214ENST00000568848 P2RX5Q93086 422 aa17.02■□□□□ 0.32
USB1-214ENST00000568848 CELF4Q9BZC1 486 aaKnown RBP17.02■□□□□ 0.32
USB1-214ENST00000568848 SLC9A2Q9UBY0 812 aa17.02■□□□□ 0.32
USB1-214ENST00000568848 DDAH1O94760 285 aa17.01■□□□□ 0.31
USB1-214ENST00000568848 CCNE2O96020 404 aa17.01■□□□□ 0.31
USB1-214ENST00000568848 SART3Q15020 963 aaKnown RBP17.01■□□□□ 0.31
USB1-214ENST00000568848 MTHFD1LQ6UB35 978 aa17.01■□□□□ 0.31
USB1-214ENST00000568848 GIMAP8Q8ND71 665 aaPredicted RBP17.01■□□□□ 0.31
USB1-214ENST00000568848 ZNF668Q96K58 619 aaPredicted RBP17.01■□□□□ 0.31
USB1-214ENST00000568848 ERVK-5Q9HDB9 667 aa17.01■□□□□ 0.31
USB1-214ENST00000568848 KCNH7Q9NS40 1196 aa17.01■□□□□ 0.31
USB1-214ENST00000568848 LRFN2Q9ULH4 789 aa17.01■□□□□ 0.31
USB1-214ENST00000568848 SGSM2O43147 1006 aa17■□□□□ 0.31
USB1-214ENST00000568848 KRT76Q01546 638 aa17■□□□□ 0.31
USB1-214ENST00000568848 IER5Q5VY09 327 aa17■□□□□ 0.31
USB1-214ENST00000568848 WWC2Q6AWC2 1192 aa17■□□□□ 0.31
USB1-214ENST00000568848 XRRA1Q6P2D8 792 aa17■□□□□ 0.31
USB1-214ENST00000568848 ASIC4Q96FT7 647 aa17■□□□□ 0.31
USB1-214ENST00000568848 TCEANC2Q96MN5 208 aa17■□□□□ 0.31
USB1-214ENST00000568848 ADAM2Q99965 735 aa17■□□□□ 0.31
USB1-214ENST00000568848 TYW1Q9NV66 732 aaKnown RBP17■□□□□ 0.31
USB1-214ENST00000568848 PCDHA2Q9Y5H9 948 aa17■□□□□ 0.31
USB1-214ENST00000568848 SPTBN4Q9H254 2564 aa16.99■□□□□ 0.31
USB1-214ENST00000568848 SPDYE3A6NKU9 549 aa16.99■□□□□ 0.31
USB1-214ENST00000568848 HIDE1A8MVS5 230 aa16.99■□□□□ 0.31
USB1-214ENST00000568848 FGF18O76093 207 aa16.99■□□□□ 0.31
USB1-214ENST00000568848 WEE2P0C1S8 567 aa16.99■□□□□ 0.31
USB1-214ENST00000568848 KLRC1P26715 233 aa16.99■□□□□ 0.31
USB1-214ENST00000568848 STAT5BP51692 787 aa16.99■□□□□ 0.31
USB1-214ENST00000568848 CBX2Q14781 532 aaPredicted RBP16.99■□□□□ 0.31
USB1-214ENST00000568848 MICU3Q86XE3 530 aa16.99■□□□□ 0.31
USB1-214ENST00000568848 SUGP1Q8IWZ8 645 aaKnown RBP16.99■□□□□ 0.31
USB1-214ENST00000568848 FBXL6Q8N531 539 aa16.99■□□□□ 0.31
USB1-214ENST00000568848 COLGALT1Q8NBJ5 622 aa16.99■□□□□ 0.31
USB1-214ENST00000568848 OSMRQ99650 979 aa16.99■□□□□ 0.31
USB1-214ENST00000568848 MXRA8Q9BRK3 442 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms