RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 GALNT17Q6IS24 598 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 SWSAP1Q6NVH7 229 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 SMAP1Q8IYB5 467 aaPredicted RBP16.36■□□□□ 0.21
CMTM3-215ENST00000568477 BLIDQ8IZY5 108 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 MICALL1Q8N3F8 863 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 DAGLBQ8NCG7 672 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 LENG9Q96B70 501 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 ZBTB10Q96DT7 871 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 AIFM3Q96NN9 605 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 TPCN1Q9ULQ1 816 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 INSL6Q9Y581 213 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 PCDHA2Q9Y5H9 948 aa16.36■□□□□ 0.21
CMTM3-215ENST00000568477 EPOPA6NHQ4 379 aa16.35■□□□□ 0.21
CMTM3-215ENST00000568477 M0QZ92 97 aa16.35■□□□□ 0.21
CMTM3-215ENST00000568477 PFKFB2O60825 505 aa16.35■□□□□ 0.21
CMTM3-215ENST00000568477 PSAPP07602 524 aa16.35■□□□□ 0.21
CMTM3-215ENST00000568477 FBXO47Q5MNV8 452 aa16.35■□□□□ 0.21
CMTM3-215ENST00000568477 IER5Q5VY09 327 aa16.35■□□□□ 0.21
CMTM3-215ENST00000568477 SPRED2Q7Z698 418 aa16.35■□□□□ 0.21
CMTM3-215ENST00000568477 TBCKQ8TEA7 893 aa16.35■□□□□ 0.21
CMTM3-215ENST00000568477 TGS1Q96RS0 853 aaKnown RBP16.35■□□□□ 0.21
CMTM3-215ENST00000568477 PCDHA10Q9Y5I2 948 aa16.35■□□□□ 0.21
CMTM3-215ENST00000568477 STK36Q9NRP7 1315 aa16.35■□□□□ 0.21
CMTM3-215ENST00000568477 COL1A2P08123 1366 aa16.35■□□□□ 0.21
CMTM3-215ENST00000568477 SMIM35A0A1B0GVV1 85 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-215ENST00000568477 LINC01553A4QN01 128 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 WDR64B1ANS9 1081 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 MSH4O15457 936 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 POU3F3P20264 500 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-215ENST00000568477 AK2P54819 239 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 HTRA4P83105 476 aaPredicted RBP16.34■□□□□ 0.21
CMTM3-215ENST00000568477 ZNF484Q5JVG2 852 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 MTHFD1LQ6UB35 978 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 TSHZ1Q6ZSZ6 1077 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 CKAP2LQ8IYA6 745 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 IL17RAQ96F46 866 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 RIT2Q99578 217 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 SAMM50Q9Y512 469 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 TRPV2Q9Y5S1 764 aa16.34■□□□□ 0.21
CMTM3-215ENST00000568477 TRANK1O15050 2925 aa16.33■□□□□ 0.21
CMTM3-215ENST00000568477 EDIL3O43854 480 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 GAS7O60861 476 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 UPP2O95045 317 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 XBP1P17861 261 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 KLRC1P26715 233 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 ERVK-21P61565 698 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 GRB10Q13322 594 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 NPY5RQ15761 445 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 KRT25Q7Z3Z0 450 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 NME8Q8N427 588 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 BBXQ8WY36 941 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-215ENST00000568477 SLC5A5Q92911 643 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 TOP1MTQ969P6 601 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 YME1L1Q96TA2 773 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 PRDM6Q9NQX0 595 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 THEGQ9P2T0 379 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 GABBR1Q9UBS5 961 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 MTUS1Q9ULD2 1270 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 KCNJ14Q9UNX9 436 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 RBM19Q9Y4C8 960 aaKnown RBP16.33■□□□□ 0.2
CMTM3-215ENST00000568477 MAFBQ9Y5Q3 323 aaPredicted RBP16.33■□□□□ 0.2
CMTM3-215ENST00000568477 MTCH2Q9Y6C9 303 aa16.33■□□□□ 0.2
CMTM3-215ENST00000568477 M0R2N6 131 aa16.32■□□□□ 0.2
CMTM3-215ENST00000568477 TDP2O95551 362 aa16.32■□□□□ 0.2
CMTM3-215ENST00000568477 SIP14410 1827 aa16.32■□□□□ 0.2
CMTM3-215ENST00000568477 ATP4AP20648 1035 aa16.32■□□□□ 0.2
CMTM3-215ENST00000568477 TMEM62Q0P6H9 643 aa16.32■□□□□ 0.2
CMTM3-215ENST00000568477 NONOQ15233 471 aaKnown RBP eCLIP16.32■□□□□ 0.2
CMTM3-215ENST00000568477 Q4G0T1 1027 aa16.32■□□□□ 0.2
CMTM3-215ENST00000568477 LRCH2Q5VUJ6 765 aa16.32■□□□□ 0.2
CMTM3-215ENST00000568477 SP7Q8TDD2 431 aaPredicted RBP16.32■□□□□ 0.2
CMTM3-215ENST00000568477 WASF1Q92558 559 aa16.32■□□□□ 0.2
CMTM3-215ENST00000568477 FAM167AQ96KS9 214 aa16.32■□□□□ 0.2
CMTM3-215ENST00000568477 TEKT3Q9BXF9 490 aa16.32■□□□□ 0.2
CMTM3-215ENST00000568477 COL25A1Q9BXS0 654 aaPredicted RBP16.32■□□□□ 0.2
CMTM3-215ENST00000568477 CELF4Q9BZC1 486 aaKnown RBP16.32■□□□□ 0.2
CMTM3-215ENST00000568477 TSPYL2Q9H2G4 693 aaPredicted RBP16.32■□□□□ 0.2
CMTM3-215ENST00000568477 DISC1Q9NRI5 854 aa16.32■□□□□ 0.2
CMTM3-215ENST00000568477 SQORQ9Y6N5 450 aa16.32■□□□□ 0.2
CMTM3-215ENST00000568477 MYH9P35579 1960 aaKnown RBP16.31■□□□□ 0.2
CMTM3-215ENST00000568477 IGSF9BQ9UPX0 1349 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 KDM3AQ9Y4C1 1321 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 CYP3A7-CYP3A51PA0A087WV96 503 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 ZBTB42B2RXF5 422 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 CHMP2AO43633 222 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 CYP3A7P24462 503 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 CD52P31358 61 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 SFNP31947 248 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 JAK3P52333 1124 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 MOXD1Q6UVY6 613 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 GDPD5Q8WTR4 605 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 PHF20Q9BVI0 1012 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 AGO3Q9H9G7 860 aaKnown RBP16.31■□□□□ 0.2
CMTM3-215ENST00000568477 ORC3Q9UBD5 711 aaPredicted RBP16.31■□□□□ 0.2
CMTM3-215ENST00000568477 CEP131Q9UPN4 1083 aa16.31■□□□□ 0.2
CMTM3-215ENST00000568477 CCDC194A0A1B0GVG4 234 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 CTDNEP1O95476 244 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 C22orf31O95567 290 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 NEK4P51957 841 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms