RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 RUFY3Q7L099 469 aa21.5■■□□□ 1.03
SPSB3-210ENST00000568416 CCDC60Q8IWA6 550 aaPredicted RBP21.5■■□□□ 1.03
SPSB3-210ENST00000568416 IL17RAQ96F46 866 aa21.5■■□□□ 1.03
SPSB3-210ENST00000568416 ZSWIM6Q9HCJ5 1215 aa21.5■■□□□ 1.03
SPSB3-210ENST00000568416 H3BNC9 293 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 HBP1O60381 514 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 CD52P31358 61 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 CIITAP33076 1130 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 CCT2P78371 535 aaKnown RBP21.49■■□□□ 1.03
SPSB3-210ENST00000568416 SETQ01105 290 aaPredicted RBP21.49■■□□□ 1.03
SPSB3-210ENST00000568416 TOB2Q14106 344 aaPredicted RBP21.49■■□□□ 1.03
SPSB3-210ENST00000568416 MTHFD1LQ6UB35 978 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 TMEM192Q8IY95 271 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 CCDC148Q8NFR7 591 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 RASGRP4Q8TDF6 673 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 ATP8B4Q8TF62 1192 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 LINC01599Q8WXQ3 324 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 ZNF577Q9BSK1 485 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 SLC26A6Q9BXS9 759 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 RC3H2Q9HBD1 1191 aaKnown RBP21.49■■□□□ 1.03
SPSB3-210ENST00000568416 NCOA5Q9HCD5 579 aaKnown RBP21.49■■□□□ 1.03
SPSB3-210ENST00000568416 ZNF302Q9NR11 478 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 TBC1D22BQ9NU19 505 aa21.49■■□□□ 1.03
SPSB3-210ENST00000568416 BACH1O14867 736 aa21.48■■□□□ 1.03
SPSB3-210ENST00000568416 PPFIA3O75145 1194 aa21.48■■□□□ 1.03
SPSB3-210ENST00000568416 ATP4AP20648 1035 aa21.48■■□□□ 1.03
SPSB3-210ENST00000568416 TMEM62Q0P6H9 643 aa21.48■■□□□ 1.03
SPSB3-210ENST00000568416 MIS18BP1Q6P0N0 1132 aa21.48■■□□□ 1.03
SPSB3-210ENST00000568416 NME8Q8N427 588 aa21.48■■□□□ 1.03
SPSB3-210ENST00000568416 BICD2Q8TD16 824 aa21.48■■□□□ 1.03
SPSB3-210ENST00000568416 MRPL38Q96DV4 380 aaKnown RBP21.48■■□□□ 1.03
SPSB3-210ENST00000568416 NECAB3Q96P71 396 aaPredicted RBP21.48■■□□□ 1.03
SPSB3-210ENST00000568416 CELF4Q9BZC1 486 aaKnown RBP21.48■■□□□ 1.03
SPSB3-210ENST00000568416 VPS54Q9P1Q0 977 aa21.48■■□□□ 1.03
SPSB3-210ENST00000568416 MYO9BQ13459 2157 aa21.48■■□□□ 1.03
SPSB3-210ENST00000568416 IGSF9BQ9UPX0 1349 aa21.48■■□□□ 1.03
SPSB3-210ENST00000568416 KDM3AQ9Y4C1 1321 aa21.48■■□□□ 1.03
SPSB3-210ENST00000568416 PRRC2BQ5JSZ5 2229 aaKnown RBP21.48■■□□□ 1.03
SPSB3-210ENST00000568416 COL1A2P08123 1366 aa21.48■■□□□ 1.03
SPSB3-210ENST00000568416 M0QZ92 97 aa21.47■■□□□ 1.03
SPSB3-210ENST00000568416 LINC00271P0C7V0 271 aa21.47■■□□□ 1.03
SPSB3-210ENST00000568416 KLRC1P26715 233 aa21.47■■□□□ 1.03
SPSB3-210ENST00000568416 GPM6BQ13491 265 aa21.47■■□□□ 1.03
SPSB3-210ENST00000568416 ZNF746Q6NUN9 644 aaPredicted RBP21.47■■□□□ 1.03
SPSB3-210ENST00000568416 SWSAP1Q6NVH7 229 aa21.47■■□□□ 1.03
SPSB3-210ENST00000568416 PDXDC2PQ6P474 469 aa21.47■■□□□ 1.03
SPSB3-210ENST00000568416 RTN4RL1Q86UN2 441 aaPredicted RBP21.47■■□□□ 1.03
SPSB3-210ENST00000568416 FIBCD1Q8N539 461 aa21.47■■□□□ 1.03
SPSB3-210ENST00000568416 LENG9Q96B70 501 aa21.47■■□□□ 1.03
SPSB3-210ENST00000568416 ZNF689Q96CS4 500 aaPredicted RBP21.47■■□□□ 1.03
SPSB3-210ENST00000568416 UIMC1Q96RL1 719 aa21.47■■□□□ 1.03
SPSB3-210ENST00000568416 ADGRA3Q8IWK6 1321 aa21.47■■□□□ 1.03
SPSB3-210ENST00000568416 TRANK1O15050 2925 aa21.47■■□□□ 1.03
SPSB3-210ENST00000568416 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.46■■□□□ 1.03
SPSB3-210ENST00000568416 EDIL3O43854 480 aa21.46■■□□□ 1.03
SPSB3-210ENST00000568416 PTPROQ16827 1216 aa21.46■■□□□ 1.03
SPSB3-210ENST00000568416 PRR16Q569H4 304 aa21.46■■□□□ 1.03
SPSB3-210ENST00000568416 ZNF484Q5JVG2 852 aa21.46■■□□□ 1.03
SPSB3-210ENST00000568416 FTHL17Q9BXU8 183 aa21.46■■□□□ 1.03
SPSB3-210ENST00000568416 TM6SF1Q9BZW5 370 aa21.46■■□□□ 1.03
SPSB3-210ENST00000568416 SH3GLB2Q9NR46 395 aa21.46■■□□□ 1.03
SPSB3-210ENST00000568416 PADI3Q9ULW8 664 aa21.46■■□□□ 1.03
SPSB3-210ENST00000568416 MAFBQ9Y5Q3 323 aaPredicted RBP21.46■■□□□ 1.03
SPSB3-210ENST00000568416 ZBTB42B2RXF5 422 aa21.45■■□□□ 1.02
SPSB3-210ENST00000568416 C5orf67F2Z3F1 127 aa21.45■■□□□ 1.02
SPSB3-210ENST00000568416 KRT76Q01546 638 aa21.45■■□□□ 1.02
SPSB3-210ENST00000568416 SMAP1Q8IYB5 467 aaPredicted RBP21.45■■□□□ 1.02
SPSB3-210ENST00000568416 CRIPAKQ8N1N5 446 aa21.45■■□□□ 1.02
SPSB3-210ENST00000568416 UBE2ZQ9H832 354 aaPredicted RBP21.45■■□□□ 1.02
SPSB3-210ENST00000568416 CYP46A1Q9Y6A2 500 aa21.45■■□□□ 1.02
SPSB3-210ENST00000568416 REV3LO60673 3130 aa21.44■■□□□ 1.02
SPSB3-210ENST00000568416 DGKIO75912 1065 aa21.44■■□□□ 1.02
SPSB3-210ENST00000568416 PAK2Q13177 524 aa21.44■■□□□ 1.02
SPSB3-210ENST00000568416 KIAA0319LQ8IZA0 1049 aa21.44■■□□□ 1.02
SPSB3-210ENST00000568416 BBXQ8WY36 941 aaPredicted RBP21.44■■□□□ 1.02
SPSB3-210ENST00000568416 ZNF274Q96GC6 653 aaPredicted RBP21.44■■□□□ 1.02
SPSB3-210ENST00000568416 PCDHA10Q9Y5I2 948 aa21.44■■□□□ 1.02
SPSB3-210ENST00000568416 RB1P06400 928 aa21.43■■□□□ 1.02
SPSB3-210ENST00000568416 PSAPP07602 524 aa21.43■■□□□ 1.02
SPSB3-210ENST00000568416 CTNNB1P35222 781 aa21.43■■□□□ 1.02
SPSB3-210ENST00000568416 BMPR1AP36894 532 aa21.43■■□□□ 1.02
SPSB3-210ENST00000568416 NLRP5P59047 1200 aa21.43■■□□□ 1.02
SPSB3-210ENST00000568416 TIGD5Q53EQ6 642 aa21.43■■□□□ 1.02
SPSB3-210ENST00000568416 CLP1Q92989 425 aaKnown RBP21.43■■□□□ 1.02
SPSB3-210ENST00000568416 RWDD3Q9Y3V2 267 aa21.43■■□□□ 1.02
SPSB3-210ENST00000568416 KAT6AQ92794 2004 aa21.43■■□□□ 1.02
SPSB3-210ENST00000568416 C22orf31O95567 290 aa21.42■■□□□ 1.02
SPSB3-210ENST00000568416 USP11P51784 963 aa21.42■■□□□ 1.02
SPSB3-210ENST00000568416 SSRP1Q08945 709 aaKnown RBP21.42■■□□□ 1.02
SPSB3-210ENST00000568416 BTG3Q14201 252 aaPredicted RBP21.42■■□□□ 1.02
SPSB3-210ENST00000568416 NPAS4Q8IUM7 802 aa21.42■■□□□ 1.02
SPSB3-210ENST00000568416 CKAP2LQ8IYA6 745 aa21.42■■□□□ 1.02
SPSB3-210ENST00000568416 TRIM22Q8IYM9 498 aa21.42■■□□□ 1.02
SPSB3-210ENST00000568416 BANK1Q8NDB2 785 aa21.42■■□□□ 1.02
SPSB3-210ENST00000568416 UPF3BQ9BZI7 483 aaKnown RBP21.42■■□□□ 1.02
SPSB3-210ENST00000568416 TMX1Q9H3N1 280 aa21.42■■□□□ 1.02
SPSB3-210ENST00000568416 CDHR5Q9HBB8 845 aa21.42■■□□□ 1.02
SPSB3-210ENST00000568416 GABBR1Q9UBS5 961 aa21.42■■□□□ 1.02
SPSB3-210ENST00000568416 TCEAL9Q9UHQ7 104 aa21.42■■□□□ 1.02
SPSB3-210ENST00000568416 MSH4O15457 936 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms