RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 M0R2N6 131 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 IPO5O00410 1097 aaKnown RBP10.79□□□□□ -0.68
SF3B3-211ENST00000568291 MAFGO15525 162 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 CDKL5O76039 1030 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 CXCL10P02778 98 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 CKBP12277 381 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 BMP1P13497 986 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 NR5A1Q13285 461 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 GRB10Q13322 594 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 MBTPS1Q14703 1052 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 TRIM71Q2Q1W2 868 aaKnown RBP10.79□□□□□ -0.68
SF3B3-211ENST00000568291 SWSAP1Q6NVH7 229 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 GIMAP8Q8ND71 665 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-211ENST00000568291 BICD2Q8TD16 824 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 LENG9Q96B70 501 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 ZBED2Q9BTP6 218 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 PHF20Q9BVI0 1012 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 COG5Q9UP83 839 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 BACH1O14867 736 aa10.78□□□□□ -0.68
SF3B3-211ENST00000568291 MSH4O15457 936 aa10.78□□□□□ -0.68
SF3B3-211ENST00000568291 CHMP2AO43633 222 aa10.78□□□□□ -0.68
SF3B3-211ENST00000568291 NBNO60934 754 aa10.78□□□□□ -0.68
SF3B3-211ENST00000568291 CD2BP2O95400 341 aaKnown RBP10.78□□□□□ -0.68
SF3B3-211ENST00000568291 PARNO95453 639 aaKnown RBP10.78□□□□□ -0.68
SF3B3-211ENST00000568291 INSRRP14616 1297 aa10.78□□□□□ -0.68
SF3B3-211ENST00000568291 PTK7Q13308 1070 aa10.78□□□□□ -0.68
SF3B3-211ENST00000568291 TRAF7Q6Q0C0 670 aa10.78□□□□□ -0.68
SF3B3-211ENST00000568291 PIK3AP1Q6ZUJ8 805 aa10.78□□□□□ -0.68
SF3B3-211ENST00000568291 SERINC5Q86VE9 423 aa10.78□□□□□ -0.68
SF3B3-211ENST00000568291 LMBR1Q8WVP7 490 aa10.78□□□□□ -0.68
SF3B3-211ENST00000568291 LIMCH1Q9UPQ0 1083 aa10.78□□□□□ -0.68
SF3B3-211ENST00000568291 LPXNO60711 386 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 ATP4AP20648 1035 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 CIITAP33076 1130 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 STAT5BP51692 787 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 PPFIA1Q13136 1202 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 PLCB4Q15147 1175 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 GRIK4Q16099 956 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 LETM2Q2VYF4 491 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 MARCH8Q5T0T0 291 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 ABHD15Q6UXT9 468 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 NIPA1Q7RTP0 329 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 CCDC60Q8IWA6 550 aaPredicted RBP10.77□□□□□ -0.69
SF3B3-211ENST00000568291 HLA-CQ95604 372 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 FAM49AQ9H0Q0 323 aaPredicted RBP10.77□□□□□ -0.69
SF3B3-211ENST00000568291 SMARCAD1Q9H4L7 1026 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 AZI2Q9H6S1 392 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 ERAP1Q9NZ08 941 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 ZNF215Q9UL58 517 aaPredicted RBP10.77□□□□□ -0.69
SF3B3-211ENST00000568291 MTUS1Q9ULD2 1270 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 TRPC6Q9Y210 931 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 NFASCO94856 1347 aa10.77□□□□□ -0.69
SF3B3-211ENST00000568291 CCDC194A0A1B0GVG4 234 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 ABHD14A-ACY1A0A1B0GW23 586 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 LINC01553A4QN01 128 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 RSPH10B2B2RC85 870 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 BTBD18B2RXH4 712 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 WNT7AO00755 349 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 SLC37A4O43826 429 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 EIF5BO60841 1220 aaKnown RBP10.76□□□□□ -0.69
SF3B3-211ENST00000568291 EFCAB14O75071 495 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 LGR5O75473 907 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 ATG7O95352 703 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 GJB5O95377 273 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 RSPH10BP0C881 870 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 ATP2B1P20020 1258 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 HOXC8P31273 242 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 RBM25P49756 843 aaKnown RBP10.76□□□□□ -0.69
SF3B3-211ENST00000568291 USP11P51784 963 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 ADAM17P78536 824 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 TMEM62Q0P6H9 643 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 NONOQ15233 471 aaKnown RBP eCLIP10.76□□□□□ -0.69
SF3B3-211ENST00000568291 FAM117BQ6P1L5 589 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 DAGLBQ8NCG7 672 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 DNAJB3Q8WWF6 145 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 TGS1Q96RS0 853 aaKnown RBP10.76□□□□□ -0.69
SF3B3-211ENST00000568291 C1QTNF1Q9BXJ1 281 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 GABBR1Q9UBS5 961 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 SAMM50Q9Y512 469 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 STK36Q9NRP7 1315 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 MYO7AQ13402 2215 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 COL4A6Q14031 1691 aa10.76□□□□□ -0.69
SF3B3-211ENST00000568291 POTEB3A0JP26 581 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 TMEM150BA6NC51 233 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 ERVK-21P61565 698 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 IKBKEQ14164 716 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 UGCGQ16739 394 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 LRCH2Q5VUJ6 765 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 MCTP2Q6DN12 878 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 MIS18BP1Q6P0N0 1132 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 PDXDC2PQ6P474 469 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 POTEBQ6S5H4 581 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 KRT25Q7Z3Z0 450 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 CKAP2LQ8IYA6 745 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 DBF4BQ8NFT6 615 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 SP7Q8TDD2 431 aaPredicted RBP10.75□□□□□ -0.69
SF3B3-211ENST00000568291 PPP1R16BQ96T49 567 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 RAD9AQ99638 391 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 SH2D3AQ9BRG2 576 aa10.75□□□□□ -0.69
SF3B3-211ENST00000568291 UNC45AQ9H3U1 944 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms