RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 SPATA6Q9NWH7 488 aaPredicted RBP6.75□□□□□ -1.33
SHCBP1-206ENST00000567698 NFIBO00712 420 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 TSPAN15O95858 294 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 CYP17A1P05093 508 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 COL6A1P12109 1028 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 PI3P19957 117 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 PTGS1P23219 599 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 OCRLQ01968 901 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 ZNF174Q15697 407 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 SKIDA1Q1XH10 827 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 VWA3BQ502W6 1294 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 PHF19Q5T6S3 580 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 EP400NLQ6ZTU2 488 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 BHLHE22Q8NFJ8 381 aaPredicted RBP6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 FNIP1Q8TF40 1166 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 SLC5A5Q92911 643 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 PCIF1Q9H4Z3 704 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 DLL4Q9NR61 685 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 TOMM22Q9NS69 142 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 MCM8Q9UJA3 840 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 SMG5Q9UPR3 1016 aaKnown RBP6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 ASB1Q9Y576 335 aa6.74□□□□□ -1.33
SHCBP1-206ENST00000567698 PRKD3O94806 890 aa6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 ENO2P09104 434 aaPredicted RBP6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 TMPRSS15P98073 1019 aa6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 SART3Q15020 963 aaKnown RBP6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 BROXQ5VW32 411 aa6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 RNF219Q5W0B1 726 aaPredicted RBP6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 VASNQ6EMK4 673 aa6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 LRSAM1Q6UWE0 723 aa6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 SPATS2Q86XZ4 545 aaKnown RBP6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 ZNF610Q8N9Z0 462 aa6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 KYQ8NBH2 561 aa6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 ATL2Q8NHH9 583 aa6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 IGDCC4Q8TDY8 1250 aa6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 RTF1Q92541 710 aaKnown RBP6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 ZNF496Q96IT1 587 aaPredicted RBP6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 KCND1Q9NSA2 647 aa6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 UCKL1Q9NWZ5 548 aa6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 IRAK3Q9Y616 596 aa6.73□□□□□ -1.33
SHCBP1-206ENST00000567698 hCG_2014768A0A024R1R8 64 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 PRAMEF22A3QJZ6 481 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 K7ESF4 209 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 PAX4O43316 350 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 PRLP01236 227 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 ERVK-21P61565 698 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 CAP1Q01518 475 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 ALDH6A1Q02252 535 aaKnown RBP6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 STILQ15468 1287 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 DDB1Q16531 1140 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 PRAMEF18Q5VWM3 479 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 NECAB2Q7Z6G3 386 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 DACT3Q96B18 629 aaPredicted RBP6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 ZSWIM3Q96MP5 696 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 TMEM209Q96SK2 561 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 FAN1Q9Y2M0 1017 aa6.72□□□□□ -1.33
SHCBP1-206ENST00000567698 CPEP16870 476 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 SMAD4Q13485 552 aaKnown RBP6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 MYBPC3Q14896 1274 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 PDCD1Q15116 288 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 KANK2Q63ZY3 851 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 SAPCD2Q86UD0 394 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 PPP1R16BQ96T49 567 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 FOXB1Q99853 325 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 ZDHHC5Q9C0B5 715 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 PCDH18Q9HCL0 1135 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 INCENPQ9NQS7 918 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 TOPORSQ9NS56 1045 aaPredicted RBP6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 GALNT8Q9NY28 637 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 SLC5A4Q9NY91 659 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 KCTD3Q9Y597 815 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 WASHC2CQ9Y4E1 1318 aa6.71□□□□□ -1.34
SHCBP1-206ENST00000567698 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 ELL2O00472 640 aaPredicted RBP6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 FFAR3O14843 346 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 IBSPP21815 317 aaPredicted RBP6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 MLLT6P55198 1093 aaPredicted RBP6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 SESN3P58005 492 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 LINC00310P59036 64 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 IGBP1P78318 339 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 IL13RA1P78552 427 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 MTMR1Q13613 665 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 INAVAQ3KP66 663 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 KANSL1Q7Z3B3 1105 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 C11orf74Q86VG3 221 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 RASSF3Q86WH2 238 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 CMIPQ8IY22 773 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 CBARPQ8N350 705 aaPredicted RBP6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 ZCCHC14Q8WYQ9 949 aaKnown RBP6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 ZBTB8AQ96BR9 441 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 SCYL1Q96KG9 808 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 DDX56Q9NY93 547 aaKnown RBP6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 ARHGAP28Q9P2N2 729 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 ZFP69BQ9UJL9 534 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 PMF1-BGLAPU3KQ54 211 aa6.7□□□□□ -1.34
SHCBP1-206ENST00000567698 ULK1O75385 1050 aa6.69□□□□□ -1.34
SHCBP1-206ENST00000567698 KATNA1O75449 491 aa6.69□□□□□ -1.34
SHCBP1-206ENST00000567698 KNG1P01042 644 aa6.69□□□□□ -1.34
SHCBP1-206ENST00000567698 CD40P25942 277 aa6.69□□□□□ -1.34
SHCBP1-206ENST00000567698 LSP1P33241 339 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms