RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 USP17L10C9JJH3 530 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 OPA1O60313 960 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 ZMYND10O75800 440 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 EGFRP00533 1210 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 ANXA13P27216 316 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 SLC16A2P36021 539 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 TUBB8Q3ZCM7 444 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 LRRC31Q6UY01 552 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 GBP6Q6ZN66 633 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 CDAN1Q8IWY9 1227 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 SCFD1Q8WVM8 642 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 PLCB1Q9NQ66 1216 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 EMILIN3Q9NT22 766 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 DMGDHQ9UI17 866 aaKnown RBP18.41■□□□□ 0.54
CMTM3-213ENST00000566756 KIAA1024Q9UPX6 916 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 ZNF541Q9H0D2 1346 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 GPBP1Q86WP2 473 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 FAM76AQ8TAV0 307 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 CRYGNQ8WXF5 182 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 GINM1Q9NU53 330 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 TRAF3IP3Q9Y228 551 aa18.41■□□□□ 0.54
CMTM3-213ENST00000566756 MYH10P35580 1976 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 CETN3O15182 167 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 PPFIA4O75335 1185 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 ASNSP08243 561 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 BMP3P12645 472 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 SLC12A3P55017 1021 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 POLR2FP61218 127 aaKnown RBP18.4■□□□□ 0.54
CMTM3-213ENST00000566756 PPFIA1Q13136 1202 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 HERC4Q5GLZ8 1057 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-213ENST00000566756 C8orf74Q6P047 294 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 SAMD7Q7Z3H4 446 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 FRMD5Q7Z6J6 570 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 DRC1Q96MC2 740 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 ANO3Q9BYT9 981 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 FHDC1Q9C0D6 1143 aaPredicted RBP18.4■□□□□ 0.54
CMTM3-213ENST00000566756 GANQ9H2C0 597 aa18.4■□□□□ 0.54
CMTM3-213ENST00000566756 BZW2Q9Y6E2 419 aaKnown RBP18.4■□□□□ 0.54
CMTM3-213ENST00000566756 E9PMD0 336 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 APBA1Q02410 837 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 SND1Q7KZF4 910 aaKnown RBP eCLIP18.39■□□□□ 0.53
CMTM3-213ENST00000566756 MIGA2Q7L4E1 593 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 TEX2Q8IWB9 1127 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 IFT20Q8IY31 132 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 GPC2Q8N158 579 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 ERMNQ8TAM6 284 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 GOPCQ9HD26 462 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 NLRC4Q9NPP4 1024 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 FEZ2Q9UHY8 353 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-213ENST00000566756 RRP15Q9Y3B9 282 aaKnown RBP18.39■□□□□ 0.53
CMTM3-213ENST00000566756 GOLGA6CA6NDK9 693 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 MYO1CO00159 1063 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 GOLGA6DP0CG33 693 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 Q4G0T1 1027 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 TBC1D10BQ4KMP7 808 aaPredicted RBP18.39■□□□□ 0.53
CMTM3-213ENST00000566756 MEI1Q5TIA1 1274 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 GSPT2Q8IYD1 628 aaKnown RBP18.39■□□□□ 0.53
CMTM3-213ENST00000566756 HDAC7Q8WUI4 952 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.39■□□□□ 0.53
CMTM3-213ENST00000566756 GDF3Q9NR23 364 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 GOLGA6AQ9NYA3 693 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 HACL1Q9UJ83 578 aa18.39■□□□□ 0.53
CMTM3-213ENST00000566756 POTEB3A0JP26 581 aa18.38■□□□□ 0.53
CMTM3-213ENST00000566756 PHF20L1A8MW92 1017 aa18.38■□□□□ 0.53
CMTM3-213ENST00000566756 POTECB2RU33 542 aa18.38■□□□□ 0.53
CMTM3-213ENST00000566756 RAD21O60216 631 aa18.38■□□□□ 0.53
CMTM3-213ENST00000566756 SSBP05455 408 aaKnown RBP eCLIP18.38■□□□□ 0.53
CMTM3-213ENST00000566756 ADAM9Q13443 819 aa18.38■□□□□ 0.53
CMTM3-213ENST00000566756 ASIC2Q16515 512 aa18.38■□□□□ 0.53
CMTM3-213ENST00000566756 QRICH1Q2TAL8 776 aa18.38■□□□□ 0.53
CMTM3-213ENST00000566756 POTEBQ6S5H4 581 aa18.38■□□□□ 0.53
CMTM3-213ENST00000566756 EIF1ADQ8N9N8 165 aaKnown RBP18.38■□□□□ 0.53
CMTM3-213ENST00000566756 FBXL5Q9UKA1 691 aa18.38■□□□□ 0.53
CMTM3-213ENST00000566756 PLA2G6O60733 806 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 ECE1P42892 770 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 SPIRE1Q08AE8 756 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 KLHL30Q0D2K2 578 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 CDC37Q16543 378 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-213ENST00000566756 ARSHQ5FYA8 562 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 SYDE2Q5VT97 1194 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 MREGQ8N565 214 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 SYT2Q8N9I0 419 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-213ENST00000566756 FGFBP2Q9BYJ0 223 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 RBM12Q9NTZ6 932 aaKnown RBP18.37■□□□□ 0.53
CMTM3-213ENST00000566756 GPRC5DQ9NZD1 345 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 PCDHA1Q9Y5I3 950 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 PDXKO00764 312 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 BUB1O43683 1085 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 FOSP01100 380 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-213ENST00000566756 RPA1P27694 616 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 EPS15P42566 896 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 KCNH2Q12809 1159 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 IFI16Q16666 785 aaKnown RBP18.37■□□□□ 0.53
CMTM3-213ENST00000566756 BMT2Q1RMZ1 405 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 EPM2AIP1Q7L775 607 aaPredicted RBP18.37■□□□□ 0.53
CMTM3-213ENST00000566756 ETNPPLQ8TBG4 499 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 ACER1Q8TDN7 264 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 TBC1D5Q92609 795 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 FAM20AQ96MK3 541 aa18.37■□□□□ 0.53
CMTM3-213ENST00000566756 NCK2O43639 380 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms