RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 CTNNB1P35222 781 aa17.07■□□□□ 0.32
RNF40-209ENST00000566703 ADD1P35611 737 aaKnown RBP17.07■□□□□ 0.32
RNF40-209ENST00000566703 FGD1P98174 961 aa17.07■□□□□ 0.32
RNF40-209ENST00000566703 NAALADL2Q58DX5 795 aa17.07■□□□□ 0.32
RNF40-209ENST00000566703 TCEAL5Q5H9L2 206 aa17.07■□□□□ 0.32
RNF40-209ENST00000566703 MTHFD1LQ6UB35 978 aa17.07■□□□□ 0.32
RNF40-209ENST00000566703 ABHD15Q6UXT9 468 aa17.07■□□□□ 0.32
RNF40-209ENST00000566703 RTN4RL1Q86UN2 441 aaPredicted RBP17.07■□□□□ 0.32
RNF40-209ENST00000566703 FAM178BQ8IXR5 827 aa17.07■□□□□ 0.32
RNF40-209ENST00000566703 CRIPAKQ8N1N5 446 aa17.07■□□□□ 0.32
RNF40-209ENST00000566703 CCDC12Q8WUD4 166 aaPredicted RBP17.07■□□□□ 0.32
RNF40-209ENST00000566703 CRYGNQ8WXF5 182 aa17.07■□□□□ 0.32
RNF40-209ENST00000566703 ZMYND12Q9H0C1 365 aa17.07■□□□□ 0.32
RNF40-209ENST00000566703 FAM49AQ9H0Q0 323 aaPredicted RBP17.07■□□□□ 0.32
RNF40-209ENST00000566703 TMEM260Q9NX78 707 aa17.07■□□□□ 0.32
RNF40-209ENST00000566703 IGSF9BQ9UPX0 1349 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 GRXCR2A6NFK2 248 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 PI4K2BG5E9Z4 385 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 DHX15O43143 795 aaKnown RBP17.06■□□□□ 0.32
RNF40-209ENST00000566703 CD52P31358 61 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 KRT76Q01546 638 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 BTG3Q14201 252 aaPredicted RBP17.06■□□□□ 0.32
RNF40-209ENST00000566703 ZNF484Q5JVG2 852 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 ODR4Q5SWX8 454 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 PTCRAQ6ISU1 281 aaPredicted RBP17.06■□□□□ 0.32
RNF40-209ENST00000566703 PLA2G4DQ86XP0 818 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 NPAS4Q8IUM7 802 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 CMTR2Q8IYT2 770 aaKnown RBP17.06■□□□□ 0.32
RNF40-209ENST00000566703 ATP8B4Q8TF62 1192 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 TBC1D22BQ9NU19 505 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 RNF216Q9NWF9 866 aaPredicted RBP17.06■□□□□ 0.32
RNF40-209ENST00000566703 PADI3Q9ULW8 664 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 FAM50BQ9Y247 325 aa17.06■□□□□ 0.32
RNF40-209ENST00000566703 ARIH1Q9Y4X5 557 aaPredicted RBP17.06■□□□□ 0.32
RNF40-209ENST00000566703 COL1A2P08123 1366 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 NCOR1O75376 2440 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 FAM86B1E9PN63 330 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 PRPF3O43395 683 aaKnown RBP17.05■□□□□ 0.32
RNF40-209ENST00000566703 GPR37L1O60883 481 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 CCNE2O96020 404 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 FAM86B2P0C5J1 330 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 KLRC1P26715 233 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 GNA11P29992 359 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 METAP2P50579 478 aaKnown RBP eCLIP17.05■□□□□ 0.32
RNF40-209ENST00000566703 TMEM31Q5JXX7 168 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 JAKMIP3Q5VZ66 844 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 MIS18BP1Q6P0N0 1132 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 GJD3Q8N144 294 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 TRAPPC12Q8WVT3 735 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 P2RX5Q93086 422 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 ZBTB10Q96DT7 871 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 C6orf50Q9HD87 102 aa17.05■□□□□ 0.32
RNF40-209ENST00000566703 IGLV3-22A0A075B6J6 115 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 IPO5O00410 1097 aaKnown RBP17.04■□□□□ 0.32
RNF40-209ENST00000566703 BACH1O14867 736 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 HSPA4P34932 840 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 SETQ01105 290 aaPredicted RBP17.04■□□□□ 0.32
RNF40-209ENST00000566703 PAK2Q13177 524 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 PDXDC2PQ6P474 469 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 BLOC1S2Q6QNY1 142 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 Q6ZUG5 572 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 SKAP1Q86WV1 359 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 LINC01599Q8WXQ3 324 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 LRFN3Q9BTN0 628 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 AGXT2Q9BYV1 514 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 CD320Q9NPF0 282 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 ZNF302Q9NR11 478 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 NAP1L2Q9ULW6 460 aaPredicted RBP17.04■□□□□ 0.32
RNF40-209ENST00000566703 TTC3P53804 2025 aa17.04■□□□□ 0.32
RNF40-209ENST00000566703 NID2Q14112 1375 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 GRM6O15303 877 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 IL9P15248 144 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 CIITAP33076 1130 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 APOBRQ0VD83 1088 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 PKN1Q16512 942 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 CTC1Q2NKJ3 1217 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 ZNF746Q6NUN9 644 aaPredicted RBP17.03■□□□□ 0.32
RNF40-209ENST00000566703 SMAP1Q8IYB5 467 aaPredicted RBP17.03■□□□□ 0.32
RNF40-209ENST00000566703 KIAA0319LQ8IZA0 1049 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 BICD2Q8TD16 824 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 BRF1Q92994 677 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 ZNF577Q9BSK1 485 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 PRKAG3Q9UGI9 489 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 PLAGL2Q9UPG8 496 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 MAFBQ9Y5Q3 323 aaPredicted RBP17.03■□□□□ 0.32
RNF40-209ENST00000566703 TRANK1O15050 2925 aa17.03■□□□□ 0.32
RNF40-209ENST00000566703 DDX39AO00148 427 aaKnown RBP17.02■□□□□ 0.32
RNF40-209ENST00000566703 MMP1P03956 469 aa17.02■□□□□ 0.32
RNF40-209ENST00000566703 PSMA5P28066 241 aa17.02■□□□□ 0.32
RNF40-209ENST00000566703 AKAP17AQ02040 695 aaKnown RBP17.02■□□□□ 0.32
RNF40-209ENST00000566703 TMEM62Q0P6H9 643 aa17.02■□□□□ 0.32
RNF40-209ENST00000566703 SWSAP1Q6NVH7 229 aa17.02■□□□□ 0.32
RNF40-209ENST00000566703 CCDC60Q8IWA6 550 aaPredicted RBP17.02■□□□□ 0.32
RNF40-209ENST00000566703 REXO1Q8N1G1 1221 aaKnown RBP17.02■□□□□ 0.32
RNF40-209ENST00000566703 ZNF710Q8N1W2 664 aa17.02■□□□□ 0.32
RNF40-209ENST00000566703 BBXQ8WY36 941 aaPredicted RBP17.02■□□□□ 0.32
RNF40-209ENST00000566703 KHSRPQ92945 711 aaKnown RBP eCLIP17.02■□□□□ 0.32
RNF40-209ENST00000566703 JAKMIP1Q96N16 626 aaKnown RBP17.02■□□□□ 0.32
RNF40-209ENST00000566703 ERVK-5Q9HDB9 667 aa17.02■□□□□ 0.32
RNF40-209ENST00000566703 LRFN2Q9ULH4 789 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms