RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ARHGAP4P98171 946 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 NFIAQ12857 509 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 IFI16Q16666 785 aaKnown RBP15.57■□□□□ 0.08
CDH1-209ENST00000566510 PEX26Q7Z412 305 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 ERMNQ8TAM6 284 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 RBM46Q8TBY0 533 aaKnown RBP15.57■□□□□ 0.08
CDH1-209ENST00000566510 DDX47Q9H0S4 455 aaKnown RBP15.57■□□□□ 0.08
CDH1-209ENST00000566510 BCCIPQ9P287 314 aaKnown RBP eCLIP15.57■□□□□ 0.08
CDH1-209ENST00000566510 CALUO43852 315 aaPredicted RBP15.57■□□□□ 0.08
CDH1-209ENST00000566510 FLOT1O75955 427 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 CASP4P49662 377 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 ERVK-9P63128 1117 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 CDC42EP5Q6NZY7 148 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 FRMD5Q7Z6J6 570 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 ZFPM1Q8IX07 1006 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 OR2W6PQ8NHA6 318 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 ZC3H12CQ9C0D7 883 aaKnown RBP15.57■□□□□ 0.08
CDH1-209ENST00000566510 BHMT2Q9H2M3 363 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 EFCC1Q9HA90 598 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 GCNT4Q9P109 453 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 BZW2Q9Y6E2 419 aaKnown RBP15.57■□□□□ 0.08
CDH1-209ENST00000566510 PITPNM2Q9BZ72 1349 aa15.57■□□□□ 0.08
CDH1-209ENST00000566510 KRIT1O00522 736 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 EEF2P13639 858 aaKnown RBP15.56■□□□□ 0.08
CDH1-209ENST00000566510 TAL1P17542 331 aaPredicted RBP15.56■□□□□ 0.08
CDH1-209ENST00000566510 INPP5BP32019 993 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 LSP1P33241 339 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 KCNA1Q09470 495 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 VPS72Q15906 364 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 C10orf76Q5T2E6 689 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 SLFN13Q68D06 897 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 DAAM2Q86T65 1068 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 VPS36Q86VN1 386 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 ATP6V1G3Q96LB4 118 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 SPDYE3A6NKU9 549 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 A6NNZ2 444 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 SART1O43290 800 aaKnown RBP15.56■□□□□ 0.08
CDH1-209ENST00000566510 KIAA0754O94854 1291 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 HOXD13P35453 343 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 TUBB8Q3ZCM7 444 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 CERKQ8TCT0 537 aa15.56■□□□□ 0.08
CDH1-209ENST00000566510 U2AF1L4Q8WU68 220 aaKnown RBP15.56■□□□□ 0.08
CDH1-209ENST00000566510 MEIS2O14770 477 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 TBCAO75347 108 aaKnown RBP15.55■□□□□ 0.08
CDH1-209ENST00000566510 GFPT2O94808 682 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 NR3C1P04150 777 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 GYS1P13807 737 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 ZNF76P36508 570 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 SEC24CP53992 1094 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 KDM7AQ6ZMT4 941 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 METTL13Q8N6R0 699 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 UBLCP1Q8WVY7 318 aaPredicted RBP15.55■□□□□ 0.08
CDH1-209ENST00000566510 PBKQ96KB5 322 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 GLT8D2Q9H1C3 349 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 TRAF3IP3Q9Y228 551 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 NOC2LQ9Y3T9 749 aaKnown RBP15.55■□□□□ 0.08
CDH1-209ENST00000566510 FRMD3A2A2Y4 597 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 PGRMC1O00264 195 aaKnown RBP15.55■□□□□ 0.08
CDH1-209ENST00000566510 HOXA13P31271 388 aaPredicted RBP15.55■□□□□ 0.08
CDH1-209ENST00000566510 CTNNA1P35221 906 aaKnown RBP15.55■□□□□ 0.08
CDH1-209ENST00000566510 ODF2Q5BJF6 829 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 B4GALNT4Q76KP1 1039 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 MREGQ8N565 214 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 SYT2Q8N9I0 419 aaPredicted RBP15.55■□□□□ 0.08
CDH1-209ENST00000566510 P2RX7Q99572 595 aaKnown RBP15.55■□□□□ 0.08
CDH1-209ENST00000566510 ISCUQ9H1K1 167 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 IKZF4Q9H2S9 585 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 PLCB1Q9NQ66 1216 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 LRRC4BQ9NT99 713 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 AMACRQ9UHK6 382 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 AJAP1Q9UKB5 411 aaPredicted RBP15.55■□□□□ 0.08
CDH1-209ENST00000566510 FOCADQ5VW36 1801 aa15.55■□□□□ 0.08
CDH1-209ENST00000566510 GCOM1H8Y6P7 765 aaPredicted RBP15.54■□□□□ 0.08
CDH1-209ENST00000566510 TULP1O00294 542 aaPredicted RBP15.54■□□□□ 0.08
CDH1-209ENST00000566510 H2AFZP0C0S5 128 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 MYZAPP0CAP1 466 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 SPATA31C1P0DKV0 1188 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 RPL13P26373 211 aaKnown RBP15.54■□□□□ 0.08
CDH1-209ENST00000566510 RPA1P27694 616 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 HSD17B3P37058 310 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 RBM5P52756 815 aaKnown RBP eCLIP15.54■□□□□ 0.08
CDH1-209ENST00000566510 H2AFVQ71UI9 128 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 TPCN2Q8NHX9 752 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 ETNPPLQ8TBG4 499 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 PPANQ9NQ55 473 aaKnown RBP15.54■□□□□ 0.08
CDH1-209ENST00000566510 E7EVH7 732 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 FAM86B1E9PN63 330 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 PPEF1O14829 653 aaPredicted RBP15.54■□□□□ 0.08
CDH1-209ENST00000566510 FAM86B2P0C5J1 330 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 ITGA4P13612 1032 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 SPIRE1Q08AE8 756 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 SLC30A10Q6XR72 485 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 OTUD6BQ8N6M0 293 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 CYP2W1Q8TAV3 490 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 PIGOQ8TEQ8 1089 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 TEKT1Q969V4 418 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 COA1Q9GZY4 146 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 EPN3Q9H201 632 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 RGL1Q9NZL6 768 aa15.54■□□□□ 0.08
CDH1-209ENST00000566510 TMEM59LQ9UK28 342 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms