RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 GUCD1Q96NT3 240 aa21.83■■□□□ 1.09
CCDC113-204ENST00000566498 NKX2-4Q9H2Z4 354 aa21.83■■□□□ 1.09
CCDC113-204ENST00000566498 STXBP5LQ9Y2K9 1186 aa21.83■■□□□ 1.09
CCDC113-204ENST00000566498 PCDHA11Q9Y5I1 949 aa21.83■■□□□ 1.09
CCDC113-204ENST00000566498 CCNT1O60563 726 aaKnown RBP21.82■■□□□ 1.08
CCDC113-204ENST00000566498 EFCAB14O75071 495 aa21.82■■□□□ 1.08
CCDC113-204ENST00000566498 CHRNA1P02708 482 aa21.82■■□□□ 1.08
CCDC113-204ENST00000566498 MYOGP15173 224 aa21.82■■□□□ 1.08
CCDC113-204ENST00000566498 KLRC1P26715 233 aa21.82■■□□□ 1.08
CCDC113-204ENST00000566498 NR5A1Q13285 461 aa21.82■■□□□ 1.08
CCDC113-204ENST00000566498 FAM26DQ5JW98 314 aa21.82■■□□□ 1.08
CCDC113-204ENST00000566498 MOXD1Q6UVY6 613 aa21.82■■□□□ 1.08
CCDC113-204ENST00000566498 SEPT8Q92599 483 aa21.82■■□□□ 1.08
CCDC113-204ENST00000566498 ZBED2Q9BTP6 218 aa21.82■■□□□ 1.08
CCDC113-204ENST00000566498 SH2B1Q9NRF2 756 aaPredicted RBP21.82■■□□□ 1.08
CCDC113-204ENST00000566498 YBX2Q9Y2T7 364 aaKnown RBP21.82■■□□□ 1.08
CCDC113-204ENST00000566498 PCDHA2Q9Y5H9 948 aa21.82■■□□□ 1.08
CCDC113-204ENST00000566498 MAFBQ9Y5Q3 323 aaPredicted RBP21.82■■□□□ 1.08
CCDC113-204ENST00000566498 PSMD10O75832 226 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 ATP4AP20648 1035 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 SFNP31947 248 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 WDR5P61964 334 aaKnown RBP21.81■■□□□ 1.08
CCDC113-204ENST00000566498 GRIN2CQ14957 1233 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 RABEP1Q15276 862 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 TCTN1Q2MV58 587 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 PLEKHG4Q58EX7 1191 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 ZNF484Q5JVG2 852 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 IER5Q5VY09 327 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 KRT40Q6A162 431 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 MTHFD1LQ6UB35 978 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 RPAINQ86UA6 219 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 HERC6Q8IVU3 1022 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 MBOAT7Q96N66 472 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 NAP1L4Q99733 375 aaKnown RBP21.81■■□□□ 1.08
CCDC113-204ENST00000566498 LLPHQ9BRT6 129 aaKnown RBP21.81■■□□□ 1.08
CCDC113-204ENST00000566498 UNC45AQ9H3U1 944 aa21.81■■□□□ 1.08
CCDC113-204ENST00000566498 MYH9P35579 1960 aaKnown RBP21.81■■□□□ 1.08
CCDC113-204ENST00000566498 BTBD18B2RXH4 712 aa21.8■■□□□ 1.08
CCDC113-204ENST00000566498 ST18O60284 1047 aa21.8■■□□□ 1.08
CCDC113-204ENST00000566498 MMP1P03956 469 aa21.8■■□□□ 1.08
CCDC113-204ENST00000566498 RPLP2P05387 115 aaKnown RBP21.8■■□□□ 1.08
CCDC113-204ENST00000566498 JAK3P52333 1124 aa21.8■■□□□ 1.08
CCDC113-204ENST00000566498 ST3GAL1Q11201 340 aa21.8■■□□□ 1.08
CCDC113-204ENST00000566498 PPP4R3AQ6IN85 833 aa21.8■■□□□ 1.08
CCDC113-204ENST00000566498 MIER3Q7Z3K6 550 aa21.8■■□□□ 1.08
CCDC113-204ENST00000566498 BBXQ8WY36 941 aaPredicted RBP21.8■■□□□ 1.08
CCDC113-204ENST00000566498 MYLIPQ8WY64 445 aa21.8■■□□□ 1.08
CCDC113-204ENST00000566498 OSBPL7Q9BZF2 842 aa21.8■■□□□ 1.08
CCDC113-204ENST00000566498 NRBP2Q9NSY0 501 aa21.8■■□□□ 1.08
CCDC113-204ENST00000566498 M0QZ92 97 aa21.79■■□□□ 1.08
CCDC113-204ENST00000566498 SLC37A4O43826 429 aa21.79■■□□□ 1.08
CCDC113-204ENST00000566498 GCFC2P16383 781 aaKnown RBP21.79■■□□□ 1.08
CCDC113-204ENST00000566498 GUCY1B3Q02153 619 aa21.79■■□□□ 1.08
CCDC113-204ENST00000566498 TMEM62Q0P6H9 643 aa21.79■■□□□ 1.08
CCDC113-204ENST00000566498 SAFBQ15424 915 aaKnown RBP eCLIP21.79■■□□□ 1.08
CCDC113-204ENST00000566498 EARS2Q5JPH6 523 aaKnown RBP21.79■■□□□ 1.08
CCDC113-204ENST00000566498 PPP2R2DQ66LE6 453 aa21.79■■□□□ 1.08
CCDC113-204ENST00000566498 TMCO2Q7Z6W1 182 aaPredicted RBP21.79■■□□□ 1.08
CCDC113-204ENST00000566498 DIS3L2Q8IYB7 885 aaKnown RBP21.79■■□□□ 1.08
CCDC113-204ENST00000566498 ETNPPLQ8TBG4 499 aa21.79■■□□□ 1.08
CCDC113-204ENST00000566498 CDY2AQ9Y6F7 541 aa21.79■■□□□ 1.08
CCDC113-204ENST00000566498 GBF1Q92538 1859 aa21.79■■□□□ 1.08
CCDC113-204ENST00000566498 TLL1O43897 1013 aa21.78■■□□□ 1.08
CCDC113-204ENST00000566498 GHRP10912 638 aa21.78■■□□□ 1.08
CCDC113-204ENST00000566498 DEFB103AP81534 67 aa21.78■■□□□ 1.08
CCDC113-204ENST00000566498 MRPS6P82932 125 aaKnown RBP21.78■■□□□ 1.08
CCDC113-204ENST00000566498 FAM117BQ6P1L5 589 aa21.78■■□□□ 1.08
CCDC113-204ENST00000566498 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.78■■□□□ 1.08
CCDC113-204ENST00000566498 NME8Q8N427 588 aa21.78■■□□□ 1.08
CCDC113-204ENST00000566498 FAM184AQ8NB25 1140 aa21.78■■□□□ 1.08
CCDC113-204ENST00000566498 C8orf76Q96K31 380 aa21.78■■□□□ 1.08
CCDC113-204ENST00000566498 FAM167AQ96KS9 214 aa21.78■■□□□ 1.08
CCDC113-204ENST00000566498 FAM20AQ96MK3 541 aa21.78■■□□□ 1.08
CCDC113-204ENST00000566498 IFIH1Q9BYX4 1025 aaKnown RBP21.78■■□□□ 1.08
CCDC113-204ENST00000566498 COL1A2P08123 1366 aa21.77■■□□□ 1.08
CCDC113-204ENST00000566498 SMIM35A0A1B0GVV1 85 aa21.77■■□□□ 1.08
CCDC113-204ENST00000566498 FAM205CA6NFA0 338 aa21.77■■□□□ 1.08
CCDC113-204ENST00000566498 BAG4O95429 457 aaKnown RBP21.77■■□□□ 1.08
CCDC113-204ENST00000566498 AMHP03971 560 aa21.77■■□□□ 1.08
CCDC113-204ENST00000566498 METTL13Q8N6R0 699 aa21.77■■□□□ 1.08
CCDC113-204ENST00000566498 RDM1Q8NG50 284 aa21.77■■□□□ 1.08
CCDC113-204ENST00000566498 APBB2Q92870 758 aa21.77■■□□□ 1.08
CCDC113-204ENST00000566498 CEP131Q9UPN4 1083 aa21.77■■□□□ 1.08
CCDC113-204ENST00000566498 CA3P07451 260 aa21.76■■□□□ 1.07
CCDC113-204ENST00000566498 FOSL2P15408 326 aa21.76■■□□□ 1.07
CCDC113-204ENST00000566498 HMGN5P82970 282 aaKnown RBP21.76■■□□□ 1.07
CCDC113-204ENST00000566498 MGAT3Q09327 533 aa21.76■■□□□ 1.07
CCDC113-204ENST00000566498 LPIN1Q14693 890 aa21.76■■□□□ 1.07
CCDC113-204ENST00000566498 MYOCDQ8IZQ8 938 aa21.76■■□□□ 1.07
CCDC113-204ENST00000566498 TNFRSF25Q93038 417 aa21.76■■□□□ 1.07
CCDC113-204ENST00000566498 PRDM12Q9H4Q4 367 aa21.76■■□□□ 1.07
CCDC113-204ENST00000566498 ZBTB42B2RXF5 422 aa21.75■■□□□ 1.07
CCDC113-204ENST00000566498 OATP04181 439 aa21.75■■□□□ 1.07
CCDC113-204ENST00000566498 PRKCEQ02156 737 aa21.75■■□□□ 1.07
CCDC113-204ENST00000566498 FBXO47Q5MNV8 452 aa21.75■■□□□ 1.07
CCDC113-204ENST00000566498 KIAA0319LQ8IZA0 1049 aa21.75■■□□□ 1.07
CCDC113-204ENST00000566498 CELF4Q9BZC1 486 aaKnown RBP21.75■■□□□ 1.07
CCDC113-204ENST00000566498 KCNMB3Q9NPA1 279 aa21.75■■□□□ 1.07
CCDC113-204ENST00000566498 GINS2Q9Y248 185 aa21.75■■□□□ 1.07
CCDC113-204ENST00000566498 TRPV2Q9Y5S1 764 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms