RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	CNNM2	Q9H8M5	875 aa		7.53	□□□□□ -1.2
TCF4-233	ENST00000566376	VTA1	Q9NP79	307 aa		7.53	□□□□□ -1.2
TCF4-233	ENST00000566376	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.53	□□□□□ -1.2
TCF4-233	ENST00000566376	FAM184B	Q9ULE4	1060 aa		7.53	□□□□□ -1.2
TCF4-233	ENST00000566376	CNPY2	Q9Y2B0	182 aa		7.53	□□□□□ -1.2
TCF4-233	ENST00000566376	NCOR1	O75376	2440 aa		7.53	□□□□□ -1.2
TCF4-233	ENST00000566376	ABCB11	O95342	1321 aa		7.52	□□□□□ -1.2
TCF4-233	ENST00000566376	MYO7A	Q13402	2215 aa		7.52	□□□□□ -1.2
TCF4-233	ENST00000566376	NID2	Q14112	1375 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	PTPDC1	A2A3K4	754 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	PQBP1	O60828	265 aa	Known RBP	7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	CLTB	P09497	229 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	PARP1	P09874	1014 aa	Known RBP	7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	NT5C2	P49902	561 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	PURA	Q00577	322 aa	Known RBP	7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	TNFAIP2	Q03169	654 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	ARHGAP1	Q07960	439 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	GAS6	Q14393	721 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	TLR1	Q15399	786 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	DUSP28	Q4G0W2	176 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	IFIT1B	Q5T764	474 aa	Known RBP	7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	RASIP1	Q5U651	963 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	TMEM214	Q6NUQ4	689 aa	Known RBP	7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	RNF207	Q6ZRF8	634 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	RNF180	Q86T96	592 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	ZNF654	Q8IZM8	581 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	CMTR1	Q8N1G2	835 aa	Known RBP	7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	GUCD1	Q96NT3	240 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	KAT14	Q9H8E8	782 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	ETNK1	Q9HBU6	452 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	STARD7	Q9NQZ5	370 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	MYH15	Q9Y2K3	1946 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	TTC28	Q96AY4	2481 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	ELP1	O95163	1332 aa		7.52	□□□□□ -1.21
TCF4-233	ENST00000566376	TRIO	O75962	3097 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	LOC102724159	A0A0B4J2E5	919 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	ASB14	A6NK59	587 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	KLRF2	D3W0D1	207 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	ZBTB5	O15062	677 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	B4GALT4	O60513	344 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	CPA1	P15085	419 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	SMTN	P53814	917 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	MRPS9	P82933	396 aa	Known RBP	7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	EXOSC10	Q01780	885 aa	Known RBP	7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	GPNMB	Q14956	572 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	PWP2	Q15269	919 aa	Known RBP	7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	FSCN1	Q16658	493 aa	Known RBP	7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	TCTN1	Q2MV58	587 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	SRBD1	Q8N5C6	995 aa	Known RBP	7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	RGS22	Q8NE09	1264 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	NCOA7	Q8NI08	942 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	KAT2B	Q92831	832 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	KCNB2	Q92953	911 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	WNT8B	Q93098	351 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	TOX2	Q96NM4	488 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	PDCD2L	Q9BRP1	358 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	UBAC1	Q9BSL1	405 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	UBE2O	Q9C0C9	1292 aa	Known RBP	7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	TTYH1	Q9H313	450 aa	Predicted RBP	7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	GOLGA2P5	Q9HBQ8	144 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	PRDM5	Q9NQX1	630 aa	Predicted RBP	7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	PXMP2	Q9NR77	195 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	RAB6B	Q9NRW1	208 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	ZNF358	Q9NW07	568 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	SERTAD1	Q9UHV2	236 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	CTNNA3	Q9UI47	895 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	BRPF3	Q9ULD4	1205 aa		7.51	□□□□□ -1.21
TCF4-233	ENST00000566376	hCG_1642624	A0A1W2PR95	340 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376		A6NJY4	79 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	SFI1	A8K8P3	1242 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	TMEM229A	B2RXF0	380 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	ARVCF	O00192	962 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	MEIS2	O14770	477 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	IFIT3	O14879	490 aa	Known RBP	7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	DYNC1LI2	O43237	492 aa	Predicted RBP	7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	PRC1	O43663	620 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	MMP3	P08254	477 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	HOXD8	P13378	290 aa	Predicted RBP	7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	EIF2AK2	P19525	551 aa	Known RBP	7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	HOXA13	P31271	388 aa	Predicted RBP	7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	RNF144A	P50876	292 aa	Predicted RBP	7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	SP2	Q02086	613 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	CENPC	Q03188	943 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	WTAP	Q15007	396 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	KIAA1211	Q6ZU35	1233 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	SGMS1	Q86VZ5	419 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	FBXO11	Q86XK2	927 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	HOMER1	Q86YM7	354 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	KRTAP19-1	Q8IUB9	90 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	RETREG2	Q8NC44	543 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	DNER	Q8NFT8	737 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	DHX38	Q92620	1227 aa	Known RBP	7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	VTI1A	Q96AJ9	217 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	NOC4L	Q9BVI4	516 aa	Known RBP	7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	SPZ1	Q9BXG8	430 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	WDR11	Q9BZH6	1224 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	TRPV6	Q9H1D0	765 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms