RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 MMRN2Q9H8L6 949 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 TLR9Q9NR96 1032 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 PARPBPQ9NWS1 579 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 PLA2G3Q9NZ20 509 aa3.9□□□□□ -1.79
SMG1-212ENST00000566328 PRODHO43272 600 aa3.89□□□□□ -1.79
SMG1-212ENST00000566328 PABPC1P11940 636 aaKnown RBP3.89□□□□□ -1.79
SMG1-212ENST00000566328 PTPN1P18031 435 aaKnown RBP3.89□□□□□ -1.79
SMG1-212ENST00000566328 MSX2P35548 267 aaPredicted RBP3.89□□□□□ -1.79
SMG1-212ENST00000566328 ETFBP38117 255 aa3.89□□□□□ -1.79
SMG1-212ENST00000566328 MEOX1P50221 254 aa3.89□□□□□ -1.79
SMG1-212ENST00000566328 DUSP8Q13202 625 aa3.89□□□□□ -1.79
SMG1-212ENST00000566328 GRM7Q14831 915 aa3.89□□□□□ -1.79
SMG1-212ENST00000566328 NOLC1Q14978 699 aaKnown RBP eCLIP3.89□□□□□ -1.79
SMG1-212ENST00000566328 KCNT2Q6UVM3 1135 aa3.89□□□□□ -1.79
SMG1-212ENST00000566328 NSMFQ6X4W1 530 aa3.89□□□□□ -1.79
SMG1-212ENST00000566328 SGMS1Q86VZ5 419 aa3.89□□□□□ -1.79
SMG1-212ENST00000566328 ZNF808Q8N4W9 903 aaPredicted RBP3.89□□□□□ -1.79
SMG1-212ENST00000566328 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.89□□□□□ -1.798e-9■■■□□ 16.8
SMG1-212ENST00000566328 RIC8BQ9NVN3 520 aa3.89□□□□□ -1.79
SMG1-212ENST00000566328 GIT1Q9Y2X7 761 aa3.89□□□□□ -1.79
SMG1-212ENST00000566328 MATN2O00339 956 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 RAMP2O60895 175 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 PEX11BO96011 259 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 PTGS1P23219 599 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 KCNQ1P51787 676 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 IFRD2Q12894 506 aaPredicted RBP3.88□□□□□ -1.79
SMG1-212ENST00000566328 FOXL1Q12952 345 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 PAK1Q13153 545 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 EIF4HQ15056 248 aaKnown RBP3.88□□□□□ -1.79
SMG1-212ENST00000566328 OTOP2Q7RTS6 562 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 LDLRAD3Q86YD5 345 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 CD244Q9BZW8 370 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 OR10A2Q9H208 303 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 IPPKQ9H8X2 491 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 INCENPQ9NQS7 918 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 GALNT8Q9NY28 637 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 SRPK3Q9UPE1 567 aa3.88□□□□□ -1.79
SMG1-212ENST00000566328 REXO2Q9Y3B8 237 aaKnown RBP3.88□□□□□ -1.79
SMG1-212ENST00000566328 PMS2P1A4D2B8 440 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 GSTA4O15217 222 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 GPR19Q15760 415 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 KRTAP15-1Q3LI76 137 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 ARHGAP36Q6ZRI8 547 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 RTKN2Q8IZC4 609 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 LRRC47Q8N1G4 583 aaKnown RBP3.87□□□□□ -1.79
SMG1-212ENST00000566328 D2HGDHQ8N465 521 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 CFHR4Q92496 578 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 LARP4BQ92615 738 aaKnown RBP3.87□□□□□ -1.79
SMG1-212ENST00000566328 WNK4Q96J92 1243 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 MPHOSPH9Q99550 1183 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 BTBD2Q9BX70 525 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 WDR26Q9H7D7 661 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 ZNF408Q9H9D4 720 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 ATP23Q9Y6H3 246 aa3.87□□□□□ -1.79
SMG1-212ENST00000566328 TRAV20A0A0B4J274 112 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.86□□□□□ -1.79
SMG1-212ENST00000566328 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 TMEM191CA6NGB0 347 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 FAM90A27PA6NNH2 459 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 CAPN14A8MX76 684 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 AQP7O14520 342 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 NAT1P18440 290 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 ADCY8P40145 1251 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 HERVK_113P62684 666 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 IL13RA1P78552 427 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 STILQ15468 1287 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 NTRK3Q16288 839 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 TBR1Q16650 682 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 FIGNQ5HY92 759 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 FNDC7Q5VTL7 733 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 TRIM68Q6AZZ1 485 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 DPY19L2P1Q6NXN4 242 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 ZNF662Q6ZS27 426 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 TMPRSS6Q8IU80 811 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 ULK2Q8IYT8 1036 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 ST13P5Q8NFI4 369 aaPredicted RBP3.86□□□□□ -1.79
SMG1-212ENST00000566328 SH3RF2Q8TEC5 729 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 OSBP2Q969R2 916 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 CLIP3Q96DZ5 547 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 KIAA1683Q9H0B3 1180 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 ARHGEF4Q9NR80 690 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 CATSPERZQ9NTU4 200 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 DMRT1Q9Y5R6 373 aa3.86□□□□□ -1.79
SMG1-212ENST00000566328 A0A0G2JNJ9 132 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 WNT9AO14904 365 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 SLC26A4O43511 780 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 PDE6AP16499 860 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 AOAHP28039 575 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 MRE11P49959 708 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 ST5P78524 1137 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 CRHR2Q13324 411 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 PCOLCEQ15113 449 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 DDR2Q16832 855 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 LARP4Q71RC2 724 aaKnown RBP eCLIP3.85□□□□□ -1.79
SMG1-212ENST00000566328 FILIP1Q7Z7B0 1213 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 ANKRD35Q8N283 1001 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 SHCBP1Q8NEM2 672 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 FBXW5Q969U6 566 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 ST7Q9NRC1 585 aa3.85□□□□□ -1.79
SMG1-212ENST00000566328 CEP72Q9P209 647 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms