RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 POF1BQ8WVV4 589 aa15.35■□□□□ 0.05
COMMD4-214ENST00000566230 CDHR1Q96JP9 859 aa15.35■□□□□ 0.05
COMMD4-214ENST00000566230 MAP3K14Q99558 947 aa15.35■□□□□ 0.05
COMMD4-214ENST00000566230 PADI3Q9ULW8 664 aa15.35■□□□□ 0.05
COMMD4-214ENST00000566230 RRN3P2A6NIE6 340 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 PLEKHA8P1O95397 391 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 ZXDAP98168 799 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 IER5Q5VY09 327 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 RBM23Q86U06 439 aaKnown RBP15.34■□□□□ 0.05
COMMD4-214ENST00000566230 ZNF654Q8IZM8 581 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 SRBD1Q8N5C6 995 aaKnown RBP15.34■□□□□ 0.05
COMMD4-214ENST00000566230 TRAPPC12Q8WVT3 735 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 PPP2R3CQ969Q6 453 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 PBXIP1Q96AQ6 731 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 ESYT1Q9BSJ8 1104 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 FTHL17Q9BXU8 183 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 TMX1Q9H3N1 280 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 PSTPIP2Q9H939 334 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 LY9Q9HBG7 655 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 BARX2Q9UMQ3 279 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-214ENST00000566230 USP15Q9Y4E8 981 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-214ENST00000566230 TRPV2Q9Y5S1 764 aa15.34■□□□□ 0.05
COMMD4-214ENST00000566230 SPTBN4Q9H254 2564 aa15.33■□□□□ 0.05
COMMD4-214ENST00000566230 STAG3L1P0CL83 205 aa15.33■□□□□ 0.04
COMMD4-214ENST00000566230 SCG2P13521 617 aa15.33■□□□□ 0.04
COMMD4-214ENST00000566230 RBM10P98175 930 aaKnown RBP15.33■□□□□ 0.04
COMMD4-214ENST00000566230 MTMR1Q13613 665 aa15.33■□□□□ 0.04
COMMD4-214ENST00000566230 PLCB4Q15147 1175 aa15.33■□□□□ 0.04
COMMD4-214ENST00000566230 UBE2SQ16763 222 aa15.33■□□□□ 0.04
COMMD4-214ENST00000566230 CMTR1Q8N1G2 835 aaKnown RBP15.33■□□□□ 0.04
COMMD4-214ENST00000566230 CTCFLQ8NI51 663 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-214ENST00000566230 CELF4Q9BZC1 486 aaKnown RBP15.33■□□□□ 0.04
COMMD4-214ENST00000566230 JADE2Q9NQC1 790 aa15.33■□□□□ 0.04
COMMD4-214ENST00000566230 SEC63Q9UGP8 760 aaKnown RBP15.33■□□□□ 0.04
COMMD4-214ENST00000566230 PCDHA2Q9Y5H9 948 aa15.33■□□□□ 0.04
COMMD4-214ENST00000566230 IGSF9BQ9UPX0 1349 aa15.33■□□□□ 0.04
COMMD4-214ENST00000566230 MYO10Q9HD67 2058 aa15.32■□□□□ 0.04
COMMD4-214ENST00000566230 PPFIA3O75145 1194 aa15.32■□□□□ 0.04
COMMD4-214ENST00000566230 CDC45O75419 566 aa15.32■□□□□ 0.04
COMMD4-214ENST00000566230 DDAH1O94760 285 aa15.32■□□□□ 0.04
COMMD4-214ENST00000566230 RPLP2P05387 115 aaKnown RBP15.32■□□□□ 0.04
COMMD4-214ENST00000566230 KIF5BP33176 963 aa15.32■□□□□ 0.04
COMMD4-214ENST00000566230 TCF15Q12870 199 aa15.32■□□□□ 0.04
COMMD4-214ENST00000566230 COL9A3Q14050 684 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-214ENST00000566230 VN1R2Q8NFZ6 395 aa15.32■□□□□ 0.04
COMMD4-214ENST00000566230 LZTS2Q9BRK4 669 aa15.32■□□□□ 0.04
COMMD4-214ENST00000566230 TLE6Q9H808 572 aa15.32■□□□□ 0.04
COMMD4-214ENST00000566230 PCDHA6Q9UN73 950 aa15.32■□□□□ 0.04
COMMD4-214ENST00000566230 PCDHA8Q9Y5H6 950 aa15.32■□□□□ 0.04
COMMD4-214ENST00000566230 CFAP54Q96N23 3096 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 hCG_1642624A0A1W2PR95 340 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 PER2O15055 1255 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 MAFGO15525 162 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 MGEA5O60502 916 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 PTPN5P54829 565 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 PAK2Q13177 524 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 TMEM266Q2M3C6 531 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 FBXL6Q8N531 539 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 CYP2W1Q8TAV3 490 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 ATP8B4Q8TF62 1192 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 PHF7Q9BWX1 381 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-214ENST00000566230 CDHR5Q9HBB8 845 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 JPH1Q9HDC5 661 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-214ENST00000566230 SLC9A2Q9UBY0 812 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 TRPC6Q9Y210 931 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 KDM3AQ9Y4C1 1321 aa15.31■□□□□ 0.04
COMMD4-214ENST00000566230 SMIM35A0A1B0GVV1 85 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 M0QZ92 97 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 RXRAP19793 462 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 SARSP49591 514 aaKnown RBP15.3■□□□□ 0.04
COMMD4-214ENST00000566230 GNAQP50148 359 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 ACTR2P61160 394 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 KRT76Q01546 638 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 MTHFD1LQ6UB35 978 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 PLPPR4Q7Z2D5 763 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 SUSD6Q92537 303 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 RPGRIP1Q96KN7 1286 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 LSG1Q9H089 658 aaKnown RBP15.3■□□□□ 0.04
COMMD4-214ENST00000566230 AZI2Q9H6S1 392 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 KCNH7Q9NS40 1196 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 HCSTQ9UBK5 93 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 LRFN2Q9ULH4 789 aa15.3■□□□□ 0.04
COMMD4-214ENST00000566230 PTPRZ1P23471 2315 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-214ENST00000566230 SPDYE3A6NKU9 549 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 ARP10275 920 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 IBSPP21815 317 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-214ENST00000566230 STAT5BP51692 787 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 ERVFC1P60507 584 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 UBE3AQ05086 875 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 PKN1Q16512 942 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 DUSP6Q16828 381 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 FAM102BQ5T8I3 360 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 SUGP1Q8IWZ8 645 aaKnown RBP15.29■□□□□ 0.04
COMMD4-214ENST00000566230 NME8Q8N427 588 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 MICAL1Q8TDZ2 1067 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 ASIC4Q96FT7 647 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 MXRA8Q9BRK3 442 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 ERVK-5Q9HDB9 667 aa15.29■□□□□ 0.04
COMMD4-214ENST00000566230 NOC2LQ9Y3T9 749 aaKnown RBP15.29■□□□□ 0.04
COMMD4-214ENST00000566230 PCDHB12Q9Y5F1 795 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms