RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 E7EWF7 191 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 O00370 1275 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 CLTAP09496 248 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 NFKBIAP25963 317 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 MARCKSP29966 332 aaPredicted RBP3.15□□□□□ -1.9
CHD9-218ENST00000566029 SERPINB4P48594 390 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 CTDSPL2Q05D32 466 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 KBTBD12Q3ZCT8 623 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 C8orf74Q6P047 294 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 RUFY4Q6ZNE9 571 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 FRMD6Q96NE9 622 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 ELAC2Q9BQ52 826 aaKnown RBP3.15□□□□□ -1.9
CHD9-218ENST00000566029 SMYD3Q9H7B4 428 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 PALMDQ9NP74 551 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 INIPQ9NRY2 104 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 GALNT8Q9NY28 637 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 STK32BQ9NY57 414 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 ZNF711Q9Y462 761 aa3.15□□□□□ -1.9
CHD9-218ENST00000566029 TET3O43151 1660 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 PEX5P50542 639 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 POU5F1Q01860 360 aaKnown RBP3.15□□□□□ -1.91
CHD9-218ENST00000566029 GRM1Q13255 1194 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 MPP3Q13368 585 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 ITGA9Q13797 1035 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 POSTNQ15063 836 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 NTRK3Q16288 839 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 RFX8Q6ZV50 586 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 SUPT20HQ8NEM7 779 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 DNAJC9Q8WXX5 260 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 MRRFQ96E11 262 aaKnown RBP3.15□□□□□ -1.91
CHD9-218ENST00000566029 ISCUQ9H1K1 167 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 BHMT2Q9H2M3 363 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 SPATA7Q9P0W8 599 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 NR2E3Q9Y5X4 410 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 SMAPO00193 183 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 WNT7AO00755 349 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 SPATA31D3P0C874 917 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 VAV1P15498 845 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 STAT6P42226 847 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 NLRP5P59047 1200 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 MYBPC2Q14324 1141 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 CCDC14Q49A88 953 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 LIN52Q52LA3 116 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 TNFAIP8L3Q5GJ75 292 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 RRAGBQ5VZM2 374 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 TMEM154Q6P9G4 183 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 SPATA31D4Q6ZUB0 917 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 MDM1Q8TC05 714 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 DBNDD2Q9BQY9 259 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 VCX3BQ9H321 246 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 RNPEPL1Q9HAU8 725 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 VCX3AQ9NNX9 186 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 SART1O43290 800 aaKnown RBP3.15□□□□□ -1.91
CHD9-218ENST00000566029 LCA5LO95447 670 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 MSH2P43246 934 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 CEBPAP49715 358 aaPredicted RBP3.15□□□□□ -1.91
CHD9-218ENST00000566029 CPLX4Q7Z7G2 160 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 BHMTQ93088 406 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 IFT74Q96LB3 600 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 DUSP9Q99956 384 aaKnown RBP3.15□□□□□ -1.91
CHD9-218ENST00000566029 SPATA16Q9BXB7 569 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 MTFR1LQ9H019 292 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 ATP8A1Q9Y2Q0 1164 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 M0R2C6 588 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 THAP12O43422 761 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 RAD51CO43502 376 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 CCNB1P14635 433 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 RFC5P40937 340 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 SPDYCQ5MJ68 293 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 CCDC80Q76M96 950 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 COL23A1Q86Y22 540 aaPredicted RBP3.15□□□□□ -1.91
CHD9-218ENST00000566029 C7orf57Q8NEG2 295 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 DACT3Q96B18 629 aaPredicted RBP3.15□□□□□ -1.91
CHD9-218ENST00000566029 VPS16Q9H269 839 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 ZC4H2Q9NQZ6 224 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 LRWD1Q9UFC0 647 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 IGSF1Q8N6C5 1336 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 A0A1W2PQJ5 194 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 GFPT2O94808 682 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 KRT15P19012 456 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 TOB1P50616 345 aaPredicted RBP3.15□□□□□ -1.91
CHD9-218ENST00000566029 RAD23BP54727 409 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 TNNC1P63316 161 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 MCL1Q07820 350 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 RAPGEF1Q13905 1077 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 ASTE1Q2TB18 679 aaPredicted RBP3.15□□□□□ -1.91
CHD9-218ENST00000566029 CNPY1Q3B7I2 92 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 ZNF394Q53GI3 561 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.15□□□□□ -1.91
CHD9-218ENST00000566029 TNIP3Q96KP6 325 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 NID2Q14112 1375 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 ZSCAN5CA6NGD5 496 aaPredicted RBP3.15□□□□□ -1.91
CHD9-218ENST00000566029 NUDT17P0C025 328 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 ALAS1P13196 640 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 CUL1Q13616 776 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 CCDC6Q16204 474 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 TBC1D9BQ66K14 1250 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 IL31Q6EBC2 164 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 C4orf50Q6ZRC1 276 aa3.15□□□□□ -1.91
CHD9-218ENST00000566029 IL17REQ8NFR9 667 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms