RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 CCDC43Q96MW1 224 aaKnown RBP20.87■□□□□ 0.93
COMMD4-213ENST00000565834 GPR20Q99678 358 aa20.87■□□□□ 0.93
COMMD4-213ENST00000565834 ZNF302Q9NR11 478 aa20.87■□□□□ 0.93
COMMD4-213ENST00000565834 SAGE1Q9NXZ1 904 aa20.87■□□□□ 0.93
COMMD4-213ENST00000565834 GABRQQ9UN88 632 aa20.87■□□□□ 0.93
COMMD4-213ENST00000565834 ARID2Q68CP9 1835 aa20.87■□□□□ 0.93
COMMD4-213ENST00000565834 IGKV6D-21A0A0A0MT36 114 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 RHOBTB3O94955 611 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 IDEP14735 1019 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 TCF7P36402 384 aaPredicted RBP20.86■□□□□ 0.93
COMMD4-213ENST00000565834 FLT3LGP49771 235 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 PRKCZQ05513 592 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 ARHGAP1Q07960 439 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 LAMC2Q13753 1193 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 CCDC144BQ3MJ40 725 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 ARSHQ5FYA8 562 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 MLKLQ8NB16 471 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 DACH1Q9UI36 760 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 CEP350Q5VT06 3117 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.86■□□□□ 0.93
COMMD4-213ENST00000565834 GPR25O00155 361 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 ZNF862O60290 1169 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 IGHA2P01877 340 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 PRKCEQ02156 737 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 HSDL1Q3SXM5 330 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 DUSP28Q4G0W2 176 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 PRAMEF19Q5SWL8 479 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 GJC2Q5T442 439 aaPredicted RBP20.86■□□□□ 0.93
COMMD4-213ENST00000565834 ZNF658Q5TYW1 1059 aaPredicted RBP20.86■□□□□ 0.93
COMMD4-213ENST00000565834 FAM160B1Q5W0V3 765 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 RINT1Q6NUQ1 792 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 RUSC1Q9BVN2 902 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 GRPEL1Q9HAV7 217 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 ANKEF1Q9NU02 776 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 KCND2Q9NZV8 630 aa20.86■□□□□ 0.93
COMMD4-213ENST00000565834 MAFBQ9Y5Q3 323 aaPredicted RBP20.86■□□□□ 0.93
COMMD4-213ENST00000565834 NPHP3-ACAD11A0A0J9YXS1 232 aa20.85■□□□□ 0.93
COMMD4-213ENST00000565834 NKRFO15226 690 aaKnown RBP eCLIP20.85■□□□□ 0.93
COMMD4-213ENST00000565834 HSPA6P17066 643 aa20.85■□□□□ 0.93
COMMD4-213ENST00000565834 SMPD1P17405 629 aa20.85■□□□□ 0.93
COMMD4-213ENST00000565834 RARRES1P49788 294 aa20.85■□□□□ 0.93
COMMD4-213ENST00000565834 OTUD6AQ7L8S5 288 aa20.85■□□□□ 0.93
COMMD4-213ENST00000565834 CD99L2Q8TCZ2 262 aa20.85■□□□□ 0.93
COMMD4-213ENST00000565834 EMID1Q96A84 441 aaPredicted RBP20.85■□□□□ 0.93
COMMD4-213ENST00000565834 GTPBP4Q9BZE4 634 aaKnown RBP20.85■□□□□ 0.93
COMMD4-213ENST00000565834 AZI2Q9H6S1 392 aa20.85■□□□□ 0.93
COMMD4-213ENST00000565834 CBX8Q9HC52 389 aa20.85■□□□□ 0.93
COMMD4-213ENST00000565834 MYH11P35749 1972 aa20.85■□□□□ 0.93
COMMD4-213ENST00000565834 ZNF865P0CJ78 1059 aaPredicted RBP20.84■□□□□ 0.93
COMMD4-213ENST00000565834 HOXD10P28358 340 aa20.84■□□□□ 0.93
COMMD4-213ENST00000565834 CAP1Q01518 475 aa20.84■□□□□ 0.93
COMMD4-213ENST00000565834 RAD51AP2Q09MP3 1159 aa20.84■□□□□ 0.93
COMMD4-213ENST00000565834 UTP14CQ5TAP6 766 aaKnown RBP20.84■□□□□ 0.93
COMMD4-213ENST00000565834 C1orf186Q6ZWK4 172 aa20.84■□□□□ 0.93
COMMD4-213ENST00000565834 TRMT1LQ7Z2T5 733 aaKnown RBP20.84■□□□□ 0.93
COMMD4-213ENST00000565834 CCDC65Q8IXS2 484 aa20.84■□□□□ 0.93
COMMD4-213ENST00000565834 AFAP1L1Q8TED9 768 aa20.84■□□□□ 0.93
COMMD4-213ENST00000565834 PCYT2Q99447 389 aa20.84■□□□□ 0.93
COMMD4-213ENST00000565834 REEP2Q9BRK0 252 aa20.84■□□□□ 0.93
COMMD4-213ENST00000565834 PANK4Q9NVE7 773 aa20.84■□□□□ 0.93
COMMD4-213ENST00000565834 PTGS1P23219 599 aa20.83■□□□□ 0.93
COMMD4-213ENST00000565834 MRE11P49959 708 aa20.83■□□□□ 0.93
COMMD4-213ENST00000565834 STAT5BP51692 787 aa20.83■□□□□ 0.93
COMMD4-213ENST00000565834 CACNB1Q02641 598 aaPredicted RBP20.83■□□□□ 0.93
COMMD4-213ENST00000565834 TNFAIP2Q03169 654 aa20.83■□□□□ 0.93
COMMD4-213ENST00000565834 GIT2Q14161 759 aa20.83■□□□□ 0.93
COMMD4-213ENST00000565834 XKR9Q5GH70 373 aa20.83■□□□□ 0.93
COMMD4-213ENST00000565834 XKR3Q5GH77 459 aa20.83■□□□□ 0.93
COMMD4-213ENST00000565834 MFSD14CQ5VZR4 134 aa20.83■□□□□ 0.93
COMMD4-213ENST00000565834 PADI6Q6TGC4 694 aa20.83■□□□□ 0.93
COMMD4-213ENST00000565834 ANO5Q75V66 913 aa20.83■□□□□ 0.93
COMMD4-213ENST00000565834 SMYD4Q8IYR2 804 aaPredicted RBP20.83■□□□□ 0.93
COMMD4-213ENST00000565834 BPIFA3Q9BQP9 254 aa20.83■□□□□ 0.93
COMMD4-213ENST00000565834 TMEM150BA6NC51 233 aa20.83■□□□□ 0.92
COMMD4-213ENST00000565834 LGR5O75473 907 aa20.83■□□□□ 0.92
COMMD4-213ENST00000565834 STBD1O95210 358 aa20.83■□□□□ 0.92
COMMD4-213ENST00000565834 COASYQ13057 564 aa20.83■□□□□ 0.92
COMMD4-213ENST00000565834 PLA2G4FQ68DD2 849 aa20.83■□□□□ 0.92
COMMD4-213ENST00000565834 TRMT44Q8IYL2 757 aaKnown RBP20.83■□□□□ 0.92
COMMD4-213ENST00000565834 PPTC7Q8NI37 304 aa20.83■□□□□ 0.92
COMMD4-213ENST00000565834 TRIB2Q92519 343 aa20.83■□□□□ 0.92
COMMD4-213ENST00000565834 ERO1AQ96HE7 468 aa20.83■□□□□ 0.92
COMMD4-213ENST00000565834 SRRDQ9UH36 339 aa20.83■□□□□ 0.92
COMMD4-213ENST00000565834 SEPT9Q9UHD8 586 aaPredicted RBP20.83■□□□□ 0.92
COMMD4-213ENST00000565834 GDAQ9Y2T3 454 aa20.83■□□□□ 0.92
COMMD4-213ENST00000565834 EMSYQ7Z589 1322 aa20.82■□□□□ 0.92
COMMD4-213ENST00000565834 FKTNO75072 461 aa20.82■□□□□ 0.92
COMMD4-213ENST00000565834 TBCAO75347 108 aaKnown RBP20.82■□□□□ 0.92
COMMD4-213ENST00000565834 OATP04181 439 aa20.82■□□□□ 0.92
COMMD4-213ENST00000565834 LUZP1Q86V48 1076 aa20.82■□□□□ 0.92
COMMD4-213ENST00000565834 OR6J1Q8NGC5 347 aa20.82■□□□□ 0.92
COMMD4-213ENST00000565834 GLG1Q92896 1179 aa20.82■□□□□ 0.92
COMMD4-213ENST00000565834 NRBP1Q9UHY1 535 aa20.82■□□□□ 0.92
COMMD4-213ENST00000565834 PCNTO95613 3336 aa20.81■□□□□ 0.92
COMMD4-213ENST00000565834 FRMD3A2A2Y4 597 aa20.81■□□□□ 0.92
COMMD4-213ENST00000565834 GNRH1P01148 92 aa20.81■□□□□ 0.92
COMMD4-213ENST00000565834 ATP4AP20648 1035 aa20.81■□□□□ 0.92
COMMD4-213ENST00000565834 GUCY2CP25092 1073 aa20.81■□□□□ 0.92
COMMD4-213ENST00000565834 NPEPPSP55786 919 aa20.81■□□□□ 0.92
COMMD4-213ENST00000565834 MAP2K1Q02750 393 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms