RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 AASSQ9UDR5 926 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 ARHGAP26Q9UNA1 814 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 CORO2BQ9UQ03 480 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 SNX13Q9Y5W8 968 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 DDX49Q9Y6V7 483 aaKnown RBP3.42□□□□□ -1.86
CHD9-216ENST00000565803 TNKSO95271 1327 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 LRRC37AA6NMS7 1700 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 GOLGA6L10A0A0M3HER8 536 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 FSBPO95073 299 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 IL2P60568 153 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 BECN1Q14457 450 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 VWA3BQ502W6 1294 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 PLA2G2CQ5R387 149 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 GPR139Q6DWJ6 353 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 TRAF7Q6Q0C0 670 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 TMCO5AQ8N6Q1 288 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 ANKRD49Q8WVL7 239 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 RSRC1Q96IZ7 334 aaKnown RBP3.42□□□□□ -1.86
CHD9-216ENST00000565803 RMDN2Q96LZ7 410 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 DISC1Q9NRI5 854 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 NDOR1Q9UHB4 597 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 PCDHGB5Q9Y5G0 923 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 N6AMT1Q9Y5N5 214 aa3.42□□□□□ -1.86
CHD9-216ENST00000565803 RIC1Q4ADV7 1423 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 ZBTB7BO15156 539 aaPredicted RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 PLOD3O60568 738 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 KLHL41O60662 606 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 KRT38O76015 456 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 DDHD2O94830 711 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 RPL17P18621 184 aaKnown RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 ID4P47928 161 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 DGKGP49619 791 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 TMEM266Q2M3C6 531 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 MAJINQ3KP22 176 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 C4orf48Q5BLP8 95 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 KIAA1614Q5VZ46 1190 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 RETSATQ6NUM9 610 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 CRTC1Q6UUV9 634 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 C1orf122Q6ZSJ8 110 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 TOGARAM2Q6ZUX3 1019 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 MILR1Q7Z6M3 343 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 CTU1Q7Z7A3 348 aaKnown RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 ANKRD18AQ8IVF6 992 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 GRAMD1CQ8IYS0 662 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 FAM9CQ8IZT9 166 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 LRRC43Q8N309 656 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 CCDC33Q8N5R6 958 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 SLC17A8Q8NDX2 589 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 UBXN10Q96LJ8 280 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 SPSB2Q99619 263 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 ALG1Q9BT22 464 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 TCHPQ9BT92 498 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 SLC7A5P2Q9GIP4 190 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 PIH1D1Q9NWS0 290 aaKnown RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 GIMAP2Q9UG22 337 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 C2CD2Q9Y426 696 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 PCDHB11Q9Y5F2 797 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 BTBD11A6QL63 1104 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 KPNA5O15131 536 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 MYO1BO43795 1136 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 DGKIO75912 1065 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 MT-ND3P03897 115 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 CCDC172P0C7W6 258 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 CCNYL3P0C7X3 344 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 POU3F3P20264 500 aaPredicted RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 CAPN3P20807 821 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 STIP1P31948 543 aaKnown RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 SKOR2Q2VWA4 1001 aaPredicted RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 DEFB115Q30KQ5 88 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 CCDC152Q4G0S7 254 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 ODF2Q5BJF6 829 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 AKAP4Q5JQC9 854 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 CEP135Q66GS9 1140 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 PKN3Q6P5Z2 889 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 LRP10Q7Z4F1 713 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 SPATS2Q86XZ4 545 aaKnown RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 LIX1LQ8IVB5 337 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 SLC41A1Q8IVJ1 513 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 CCDC65Q8IXS2 484 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 CCDC191Q8NCU4 936 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 TDRD7Q8NHU6 1098 aaKnown RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 NOC3LQ8WTT2 800 aaKnown RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 STON2Q8WXE9 905 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 ALKBH8Q96BT7 664 aaKnown RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 PPM1MQ96MI6 270 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 SLF1Q9BQI6 1058 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 EDEM3Q9BZQ6 932 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 KRT82Q9NSB4 513 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 ADD3Q9UEY8 706 aaKnown RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 PCSK1NQ9UHG2 260 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 GPR34Q9UPC5 381 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 SUPT16HQ9Y5B9 1047 aaKnown RBP3.41□□□□□ -1.86
CHD9-216ENST00000565803 AP1M2Q9Y6Q5 423 aa3.41□□□□□ -1.86
CHD9-216ENST00000565803 TONSLQ96HA7 1378 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 KRT87PA6NCN2 255 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 BRINP1O60477 761 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 CPNE3O75131 537 aaKnown RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 COQ9O75208 318 aa3.4□□□□□ -1.86
CHD9-216ENST00000565803 TBCAO75347 108 aaKnown RBP3.4□□□□□ -1.86
CHD9-216ENST00000565803 TBX18O95935 607 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms