RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PCYT2Q99447 389 aa18.93■□□□□ 0.62
USB1-211ENST00000565662 RWDD3Q9Y3V2 267 aa18.93■□□□□ 0.62
USB1-211ENST00000565662 SAMM50Q9Y512 469 aa18.93■□□□□ 0.62
USB1-211ENST00000565662 TRPV2Q9Y5S1 764 aa18.93■□□□□ 0.62
USB1-211ENST00000565662 CDH23Q9H251 3354 aa18.93■□□□□ 0.62
USB1-211ENST00000565662 MAGEB2O15479 319 aa18.92■□□□□ 0.62
USB1-211ENST00000565662 DHX15O43143 795 aaKnown RBP18.92■□□□□ 0.62
USB1-211ENST00000565662 DKC1O60832 514 aaKnown RBP eCLIP18.92■□□□□ 0.621e-5■■■■□ 25.7
USB1-211ENST00000565662 TAP1Q03518 808 aa18.92■□□□□ 0.62
USB1-211ENST00000565662 MGAT3Q09327 533 aa18.92■□□□□ 0.62
USB1-211ENST00000565662 MKRN4PQ13434 485 aaPredicted RBP18.92■□□□□ 0.62
USB1-211ENST00000565662 CKAP2LQ8IYA6 745 aa18.92■□□□□ 0.62
USB1-211ENST00000565662 MYOCDQ8IZQ8 938 aa18.92■□□□□ 0.62
USB1-211ENST00000565662 TGS1Q96RS0 853 aaKnown RBP18.92■□□□□ 0.62
USB1-211ENST00000565662 MAFBQ9Y5Q3 323 aaPredicted RBP18.92■□□□□ 0.62
USB1-211ENST00000565662 IGSF9BQ9UPX0 1349 aa18.92■□□□□ 0.62
USB1-211ENST00000565662 MYO9BQ13459 2157 aa18.92■□□□□ 0.62
USB1-211ENST00000565662 SIP14410 1827 aa18.91■□□□□ 0.62
USB1-211ENST00000565662 DDX39AO00148 427 aaKnown RBP18.91■□□□□ 0.62
USB1-211ENST00000565662 CCNE2O96020 404 aa18.91■□□□□ 0.62
USB1-211ENST00000565662 TMOD1P28289 359 aa18.91■□□□□ 0.62
USB1-211ENST00000565662 IGBP1P78318 339 aa18.91■□□□□ 0.62
USB1-211ENST00000565662 DEFB103AP81534 67 aa18.91■□□□□ 0.62
USB1-211ENST00000565662 MARCH8Q5T0T0 291 aa18.91■□□□□ 0.62
USB1-211ENST00000565662 LRCH2Q5VUJ6 765 aa18.91■□□□□ 0.62
USB1-211ENST00000565662 CCDC60Q8IWA6 550 aaPredicted RBP18.91■□□□□ 0.62
USB1-211ENST00000565662 DNAJB3Q8WWF6 145 aa18.91■□□□□ 0.62
USB1-211ENST00000565662 TOP1MTQ969P6 601 aa18.91■□□□□ 0.62
USB1-211ENST00000565662 LENG9Q96B70 501 aa18.91■□□□□ 0.62
USB1-211ENST00000565662 PHF20Q9BVI0 1012 aa18.91■□□□□ 0.62
USB1-211ENST00000565662 CDY2AQ9Y6F7 541 aa18.91■□□□□ 0.62
USB1-211ENST00000565662 M0R2N6 131 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 IGFBP4P22692 258 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 AK2P54819 239 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 HTRA4P83105 476 aaPredicted RBP18.9■□□□□ 0.62
USB1-211ENST00000565662 CDC42EP1Q00587 391 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 TRIM29Q14134 588 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 AAK1Q2M2I8 961 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 FBXO47Q5MNV8 452 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 PPP4R3AQ6IN85 833 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 SWSAP1Q6NVH7 229 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 MTHFD1LQ6UB35 978 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 RASGRP4Q8TDF6 673 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 SLC5A5Q92911 643 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 GTF3C6Q969F1 213 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 YME1L1Q96TA2 773 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 DISC1Q9NRI5 854 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 NRBP2Q9NSY0 501 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 TPCN1Q9ULQ1 816 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 RALGAPA2Q2PPJ7 1873 aa18.9■□□□□ 0.62
USB1-211ENST00000565662 TBX3O15119 743 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 CHRNA1P02708 482 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 GHRP10912 638 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 ERVK-21P61565 698 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 RUFY4Q6ZNE9 571 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 NEK8Q86SG6 692 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 EXOC8Q8IYI6 725 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 SP7Q8TDD2 431 aaPredicted RBP18.89■□□□□ 0.61
USB1-211ENST00000565662 ATXN2LQ8WWM7 1075 aaKnown RBP18.89■□□□□ 0.61
USB1-211ENST00000565662 FAM20AQ96MK3 541 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 MBOAT7Q96N66 472 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 MAP7D2Q96T17 732 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 THEGQ9P2T0 379 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 ORC3Q9UBD5 711 aaPredicted RBP18.89■□□□□ 0.61
USB1-211ENST00000565662 TELO2Q9Y4R8 837 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 PPME1Q9Y570 386 aa18.89■□□□□ 0.61
USB1-211ENST00000565662 WDR81Q562E7 1941 aa18.88■□□□□ 0.61
USB1-211ENST00000565662 MSH4O15457 936 aa18.88■□□□□ 0.61
USB1-211ENST00000565662 STAG3L1P0CL83 205 aa18.88■□□□□ 0.61
USB1-211ENST00000565662 MYOGP15173 224 aa18.88■□□□□ 0.61
USB1-211ENST00000565662 NEK4P51957 841 aa18.88■□□□□ 0.61
USB1-211ENST00000565662 PAK2Q13177 524 aa18.88■□□□□ 0.61
USB1-211ENST00000565662 LPIN1Q14693 890 aa18.88■□□□□ 0.61
USB1-211ENST00000565662 JPH2Q9BR39 696 aaPredicted RBP18.88■□□□□ 0.61
USB1-211ENST00000565662 CELF4Q9BZC1 486 aaKnown RBP18.88■□□□□ 0.61
USB1-211ENST00000565662 FAM49AQ9H0Q0 323 aaPredicted RBP18.88■□□□□ 0.61
USB1-211ENST00000565662 DDX25Q9UHL0 483 aaKnown RBP18.88■□□□□ 0.61
USB1-211ENST00000565662 OATP04181 439 aa18.87■□□□□ 0.61
USB1-211ENST00000565662 KLRC1P26715 233 aa18.87■□□□□ 0.61
USB1-211ENST00000565662 KRT2P35908 639 aa18.87■□□□□ 0.61
USB1-211ENST00000565662 PTPROQ16827 1216 aa18.87■□□□□ 0.61
USB1-211ENST00000565662 ARNTL2Q8WYA1 636 aa18.87■□□□□ 0.61
USB1-211ENST00000565662 UPF2Q9HAU5 1272 aaKnown RBP18.87■□□□□ 0.61
USB1-211ENST00000565662 GABBR1Q9UBS5 961 aa18.87■□□□□ 0.61
USB1-211ENST00000565662 COL4A4P53420 1690 aaPredicted RBP18.86■□□□□ 0.61
USB1-211ENST00000565662 LINC01553A4QN01 128 aa18.86■□□□□ 0.61
USB1-211ENST00000565662 GPR182O15218 404 aa18.86■□□□□ 0.61
USB1-211ENST00000565662 PSMD10O75832 226 aa18.86■□□□□ 0.61
USB1-211ENST00000565662 MIER3Q7Z3K6 550 aa18.86■□□□□ 0.61
USB1-211ENST00000565662 SLFN12Q8IYM2 578 aa18.86■□□□□ 0.61
USB1-211ENST00000565662 COG5Q9UP83 839 aa18.86■□□□□ 0.61
USB1-211ENST00000565662 PPFIA3O75145 1194 aa18.85■□□□□ 0.61
USB1-211ENST00000565662 BAG4O95429 457 aaKnown RBP18.85■□□□□ 0.61
USB1-211ENST00000565662 PRKCEQ02156 737 aa18.85■□□□□ 0.61
USB1-211ENST00000565662 ADGRE1Q14246 886 aa18.85■□□□□ 0.61
USB1-211ENST00000565662 SAFBQ15424 915 aaKnown RBP eCLIP18.85■□□□□ 0.61
USB1-211ENST00000565662 NPY5RQ15761 445 aa18.85■□□□□ 0.61
USB1-211ENST00000565662 LETM2Q2VYF4 491 aa18.85■□□□□ 0.61
USB1-211ENST00000565662 XKR3Q5GH77 459 aa18.85■□□□□ 0.61
USB1-211ENST00000565662 TJAP1Q5JTD0 557 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms