RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 IL17RAQ96F46 866 aa13.58□□□□□ -0.24
FANCA-218ENST00000565582 PPP1R16BQ96T49 567 aa13.58□□□□□ -0.24
FANCA-218ENST00000565582 SLC26A6Q9BXS9 759 aa13.58□□□□□ -0.24
FANCA-218ENST00000565582 RC3H2Q9HBD1 1191 aaKnown RBP13.58□□□□□ -0.24
FANCA-218ENST00000565582 CCDC196A0A1B0GTZ2 297 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 ESYT2A0FGR8 921 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 H3BNC9 293 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 IPO5O00410 1097 aaKnown RBP13.57□□□□□ -0.24
FANCA-218ENST00000565582 ENPP3O14638 875 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 DHX15O43143 795 aaKnown RBP13.57□□□□□ -0.24
FANCA-218ENST00000565582 ATG7O95352 703 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 CCT2P78371 535 aaKnown RBP13.57□□□□□ -0.24
FANCA-218ENST00000565582 IER5Q5VY09 327 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 MTHFD1LQ6UB35 978 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 ABHD15Q6UXT9 468 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 NIPA1Q7RTP0 329 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 FIBCD1Q8N539 461 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 SAMD11Q96NU1 681 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 ZNF577Q9BSK1 485 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 ZMYND12Q9H0C1 365 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 GLT8D2Q9H1C3 349 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 C6orf50Q9HD87 102 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 VPS54Q9P1Q0 977 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 GINS2Q9Y248 185 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 PCDHA2Q9Y5H9 948 aa13.57□□□□□ -0.24
FANCA-218ENST00000565582 KIAA1671Q9BY89 1806 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 IGKV6D-21A0A0A0MT36 114 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 H3BQ06 376 aaPredicted RBP13.56□□□□□ -0.24
FANCA-218ENST00000565582 M0QZ92 97 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 PRPF3O43395 683 aaKnown RBP13.56□□□□□ -0.24
FANCA-218ENST00000565582 GATMP50440 423 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 PAK2Q13177 524 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 BTG3Q14201 252 aaPredicted RBP13.56□□□□□ -0.24
FANCA-218ENST00000565582 NTRK3Q16288 839 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 PTPROQ16827 1216 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 PAN2Q504Q3 1202 aaKnown RBP13.56□□□□□ -0.24
FANCA-218ENST00000565582 TIGD5Q53EQ6 642 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 PRR16Q569H4 304 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 TCEAL5Q5H9L2 206 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 FAM160B1Q5W0V3 765 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 PDXDC2PQ6P474 469 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 RTN4RL1Q86UN2 441 aaPredicted RBP13.56□□□□□ -0.24
FANCA-218ENST00000565582 TEX2Q8IWB9 1127 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 BANK1Q8NDB2 785 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 ATP8B4Q8TF62 1192 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 KHSRPQ92945 711 aaKnown RBP eCLIP13.56□□□□□ -0.241e-8■■■■□ 22.6
FANCA-218ENST00000565582 LARP6Q9BRS8 491 aaKnown RBP13.56□□□□□ -0.24
FANCA-218ENST00000565582 CELF4Q9BZC1 486 aaKnown RBP13.56□□□□□ -0.24
FANCA-218ENST00000565582 ZNF302Q9NR11 478 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 PADI3Q9ULW8 664 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 IGSF9BQ9UPX0 1349 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 LOXHD1Q8IVV2 1947 aa13.56□□□□□ -0.24
FANCA-218ENST00000565582 SMIM35A0A1B0GVV1 85 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 ZBTB42B2RXF5 422 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 GRM6O15303 877 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 CYP3A4P08684 503 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 IL9P15248 144 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 ATP4AP20648 1035 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 COL9A1P20849 921 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 KLRC1P26715 233 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 KRT76Q01546 638 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 AKAP17AQ02040 695 aaKnown RBP13.55□□□□□ -0.24
FANCA-218ENST00000565582 TOB2Q14106 344 aaPredicted RBP13.55□□□□□ -0.24
FANCA-218ENST00000565582 MIS18BP1Q6P0N0 1132 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 EP400NLQ6ZTU2 488 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 CKAP2LQ8IYA6 745 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 CCDC12Q8WUD4 166 aaPredicted RBP13.55□□□□□ -0.24
FANCA-218ENST00000565582 TMEM40Q8WWA1 233 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 LENG9Q96B70 501 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 AGXT2Q9BYV1 514 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 TMX1Q9H3N1 280 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 CDHR5Q9HBB8 845 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 CD320Q9NPF0 282 aa13.55□□□□□ -0.24
FANCA-218ENST00000565582 MRPL42Q9Y6G3 142 aaKnown RBP13.55□□□□□ -0.24
FANCA-218ENST00000565582 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.54□□□□□ -0.24
FANCA-218ENST00000565582 HBP1O60381 514 aa13.54□□□□□ -0.24
FANCA-218ENST00000565582 MGEA5O60502 916 aa13.54□□□□□ -0.24
FANCA-218ENST00000565582 DGKIO75912 1065 aa13.54□□□□□ -0.24
FANCA-218ENST00000565582 REC8O95072 547 aa13.54□□□□□ -0.24
FANCA-218ENST00000565582 PDIA3P30101 505 aaKnown RBP13.54□□□□□ -0.24
FANCA-218ENST00000565582 SLC26A2P50443 739 aa13.54□□□□□ -0.24
FANCA-218ENST00000565582 SETQ01105 290 aaPredicted RBP13.54□□□□□ -0.24
FANCA-218ENST00000565582 NFX1Q12986 1120 aaKnown RBP13.54□□□□□ -0.24
FANCA-218ENST00000565582 KIAA0319LQ8IZA0 1049 aa13.54□□□□□ -0.24
FANCA-218ENST00000565582 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.54□□□□□ -0.24
FANCA-218ENST00000565582 TNPO1Q92973 898 aaKnown RBP13.54□□□□□ -0.24
FANCA-218ENST00000565582 GJA10Q969M2 543 aa13.54□□□□□ -0.24
FANCA-218ENST00000565582 ZNF689Q96CS4 500 aaPredicted RBP13.54□□□□□ -0.24
FANCA-218ENST00000565582 RNF26Q9BY78 433 aaPredicted RBP13.54□□□□□ -0.24
FANCA-218ENST00000565582 UPF3BQ9BZI7 483 aaKnown RBP13.54□□□□□ -0.24
FANCA-218ENST00000565582 NSUN3Q9H649 340 aaKnown RBP13.54□□□□□ -0.24
FANCA-218ENST00000565582 EPHX3Q9H6B9 360 aa13.54□□□□□ -0.24
FANCA-218ENST00000565582 TCEAL9Q9UHQ7 104 aa13.54□□□□□ -0.24
FANCA-218ENST00000565582 NOC2LQ9Y3T9 749 aaKnown RBP13.54□□□□□ -0.24
FANCA-218ENST00000565582 TTC3P53804 2025 aa13.54□□□□□ -0.24
FANCA-218ENST00000565582 CHMP2AO43633 222 aa13.53□□□□□ -0.24
FANCA-218ENST00000565582 EDIL3O43854 480 aa13.53□□□□□ -0.24
FANCA-218ENST00000565582 DTNBO60941 627 aa13.53□□□□□ -0.24
FANCA-218ENST00000565582 C22orf31O95567 290 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms