RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 DKC1O60832 514 aaKnown RBP eCLIP21.28■■□□□ 1
CSPG4P13-201ENST00000565545 LYPLA2O95372 231 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 EYA4O95677 639 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 RPN1P04843 607 aaKnown RBP21.28■■□□□ 1
CSPG4P13-201ENST00000565545 PLA2G4BP0C869 781 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 CACNB2Q08289 660 aaPredicted RBP21.28■■□□□ 1
CSPG4P13-201ENST00000565545 MCM6Q14566 821 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 UVSSAQ2YD98 709 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 POTEGQ6S5H5 508 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 ARMCX2Q7L311 632 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 KCNK18Q7Z418 384 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 TPH2Q8IWU9 490 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 DEFB123Q8N688 67 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 MLKLQ8NB16 471 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 BLZF1Q9H2G9 400 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 ZSWIM4Q9H7M6 989 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 VTA1Q9NP79 307 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 RGL1Q9NZL6 768 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 SAMM50Q9Y512 469 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 PCDHA10Q9Y5I2 948 aa21.28■■□□□ 1
CSPG4P13-201ENST00000565545 MCM3APO60318 1980 aa21.27■■□□□ 1
CSPG4P13-201ENST00000565545 PVALEFA0A1B0GWK0 134 aa21.27■■□□□ 1
CSPG4P13-201ENST00000565545 E9PMD0 336 aa21.27■■□□□ 1
CSPG4P13-201ENST00000565545 BIN1O00499 593 aa21.27■■□□□ 1
CSPG4P13-201ENST00000565545 XRCC6P12956 609 aaKnown RBP eCLIP21.27■■□□□ 1
CSPG4P13-201ENST00000565545 QARSP47897 775 aaKnown RBP21.27■■□□□ 1
CSPG4P13-201ENST00000565545 ZNF165P49910 485 aa21.27■■□□□ 1
CSPG4P13-201ENST00000565545 CYP4A11Q02928 519 aa21.27■■□□□ 1
CSPG4P13-201ENST00000565545 SYT2Q8N9I0 419 aaPredicted RBP21.27■■□□□ 1
CSPG4P13-201ENST00000565545 BPIFA3Q9BQP9 254 aa21.27■■□□□ 1
CSPG4P13-201ENST00000565545 DNAJC25Q9H1X3 360 aa21.27■■□□□ 1
CSPG4P13-201ENST00000565545 WDR81Q562E7 1941 aa21.27■■□□□ 1
CSPG4P13-201ENST00000565545 SYNGAP1Q96PV0 1343 aa21.27■□□□□ 0.99
CSPG4P13-201ENST00000565545 CCNE2O96020 404 aa21.26■□□□□ 0.99
CSPG4P13-201ENST00000565545 PSAPP07602 524 aa21.26■□□□□ 0.99
CSPG4P13-201ENST00000565545 HOXC6P09630 235 aa21.26■□□□□ 0.99
CSPG4P13-201ENST00000565545 CCND3P30281 292 aaPredicted RBP21.26■□□□□ 0.99
CSPG4P13-201ENST00000565545 MAP2K5Q13163 448 aa21.26■□□□□ 0.99
CSPG4P13-201ENST00000565545 CTTNQ14247 550 aaKnown RBP21.26■□□□□ 0.99
CSPG4P13-201ENST00000565545 CCL14Q16627 93 aa21.26■□□□□ 0.99
CSPG4P13-201ENST00000565545 GPR153Q6NV75 609 aa21.26■□□□□ 0.99
CSPG4P13-201ENST00000565545 TDHQ8IZJ6 230 aa21.26■□□□□ 0.99
CSPG4P13-201ENST00000565545 MAML3Q96JK9 1138 aa21.26■□□□□ 0.99
CSPG4P13-201ENST00000565545 LXNQ9BS40 222 aa21.26■□□□□ 0.99
CSPG4P13-201ENST00000565545 DDX41Q9UJV9 622 aaKnown RBP21.26■□□□□ 0.99
CSPG4P13-201ENST00000565545 MYMKA6NI61 221 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 UBA1P22314 1058 aaKnown RBP21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 CASP1P29466 404 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 SLC12A3P55017 1021 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 PSMC5P62195 406 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 ASIC1P78348 528 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 SP2Q02086 613 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 DHX8Q14562 1220 aaKnown RBP21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 TTLL4Q14679 1199 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 DPCR1Q3MIW9 517 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 LRIT3Q3SXY7 679 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 MIS18BP1Q6P0N0 1132 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 C4orf19Q8IY42 314 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 SCFD2Q8WU76 684 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 USP6NLQ92738 828 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 APBA2Q99767 749 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 DOCK5Q9H7D0 1870 aa21.25■□□□□ 0.99
CSPG4P13-201ENST00000565545 RBM47A0AV96 593 aaKnown RBP21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 KLRC4O43908 158 aa21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 RHOBTB3O94955 611 aa21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 ATG7O95352 703 aa21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 ACTR2P61160 394 aa21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 ZNF658Q5TYW1 1059 aaPredicted RBP21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 METTL7BQ6UX53 244 aa21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 C11orf57Q6ZUT1 292 aaPredicted RBP21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 UNC13DQ70J99 1090 aa21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 Q7L0L9 218 aa21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 BANK1Q8NDB2 785 aa21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 ATP6V0A1Q93050 837 aa21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 TINF2Q9BSI4 451 aa21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 KCND2Q9NZV8 630 aa21.24■□□□□ 0.99
CSPG4P13-201ENST00000565545 SSBP05455 408 aaKnown RBP eCLIP21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 PSMC6P62333 389 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 KMT5BQ4FZB7 885 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 MFSD14CQ5VZR4 134 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 LHX8Q68G74 356 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 ISM2Q6H9L7 571 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 CCDC62Q6P9F0 684 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 ABHD15Q6UXT9 468 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 CYFIP1Q7L576 1253 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 EEPD1Q7L9B9 569 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 GPBP1Q86WP2 473 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 RNF214Q8ND24 703 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 DDX12PQ92771 950 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 ABHD16BQ9H3Z7 469 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 CBX8Q9HC52 389 aa21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 DBR1Q9UK59 544 aaKnown RBP21.23■□□□□ 0.99
CSPG4P13-201ENST00000565545 SUPT20HL2P0C7V6 817 aa21.22■□□□□ 0.99
CSPG4P13-201ENST00000565545 COL6A1P12109 1028 aa21.22■□□□□ 0.99
CSPG4P13-201ENST00000565545 CYP11B2P19099 503 aa21.22■□□□□ 0.99
CSPG4P13-201ENST00000565545 BMP6P22004 513 aa21.22■□□□□ 0.99
CSPG4P13-201ENST00000565545 PPP1R2P41236 205 aa21.22■□□□□ 0.99
CSPG4P13-201ENST00000565545 PSMD2Q13200 908 aa21.22■□□□□ 0.99
CSPG4P13-201ENST00000565545 FBXO16Q8IX29 292 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms