RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 MYH9P35579 1960 aaKnown RBP27.03■■□□□ 1.92
RAB40C-209ENST00000565511 TOB2Q14106 344 aaPredicted RBP27.03■■□□□ 1.92
RAB40C-209ENST00000565511 TSHZ1Q6ZSZ6 1077 aa27.03■■□□□ 1.92
RAB40C-209ENST00000565511 RSPH3Q86UC2 560 aa27.03■■□□□ 1.92
RAB40C-209ENST00000565511 IL27Q8NEV9 243 aa27.03■■□□□ 1.92
RAB40C-209ENST00000565511 HLA-CQ95604 372 aa27.03■■□□□ 1.92
RAB40C-209ENST00000565511 PCDHA2Q9Y5H9 948 aa27.03■■□□□ 1.92
RAB40C-209ENST00000565511 CCDC196A0A1B0GTZ2 297 aa27.02■■□□□ 1.92
RAB40C-209ENST00000565511 POTEB3A0JP26 581 aa27.02■■□□□ 1.92
RAB40C-209ENST00000565511 ENPP3O14638 875 aa27.02■■□□□ 1.92
RAB40C-209ENST00000565511 ATP4AP20648 1035 aa27.02■■□□□ 1.92
RAB40C-209ENST00000565511 PDIA3P30101 505 aaKnown RBP27.02■■□□□ 1.92
RAB40C-209ENST00000565511 CCT2P78371 535 aaKnown RBP27.02■■□□□ 1.92
RAB40C-209ENST00000565511 POTEBQ6S5H4 581 aa27.02■■□□□ 1.92
RAB40C-209ENST00000565511 RTN4RL1Q86UN2 441 aaPredicted RBP27.02■■□□□ 1.92
RAB40C-209ENST00000565511 REXO1Q8N1G1 1221 aaKnown RBP27.02■■□□□ 1.92
RAB40C-209ENST00000565511 TRPV2Q9Y5S1 764 aa27.02■■□□□ 1.92
RAB40C-209ENST00000565511 ZBTB42B2RXF5 422 aa27.01■■□□□ 1.91
RAB40C-209ENST00000565511 MTHFD1LQ6UB35 978 aa27.01■■□□□ 1.91
RAB40C-209ENST00000565511 TMEM192Q8IY95 271 aa27.01■■□□□ 1.91
RAB40C-209ENST00000565511 LENG9Q96B70 501 aa27.01■■□□□ 1.91
RAB40C-209ENST00000565511 LARP6Q9BRS8 491 aaKnown RBP27.01■■□□□ 1.91
RAB40C-209ENST00000565511 SLC26A6Q9BXS9 759 aa27.01■■□□□ 1.91
RAB40C-209ENST00000565511 VPS54Q9P1Q0 977 aa27.01■■□□□ 1.91
RAB40C-209ENST00000565511 IPO5O00410 1097 aaKnown RBP27■■□□□ 1.91
RAB40C-209ENST00000565511 EVCP57679 992 aa27■■□□□ 1.91
RAB40C-209ENST00000565511 AAK1Q2M2I8 961 aa27■■□□□ 1.91
RAB40C-209ENST00000565511 C6orf50Q9HD87 102 aa27■■□□□ 1.91
RAB40C-209ENST00000565511 H3BNC9 293 aa26.99■■□□□ 1.91
RAB40C-209ENST00000565511 BACH1O14867 736 aa26.99■■□□□ 1.91
RAB40C-209ENST00000565511 REC8O95072 547 aa26.99■■□□□ 1.91
RAB40C-209ENST00000565511 IFNAR1P17181 557 aa26.99■■□□□ 1.91
RAB40C-209ENST00000565511 GPM6BQ13491 265 aa26.99■■□□□ 1.91
RAB40C-209ENST00000565511 ATP8B4Q8TF62 1192 aa26.99■■□□□ 1.91
RAB40C-209ENST00000565511 MRPL38Q96DV4 380 aaKnown RBP26.99■■□□□ 1.91
RAB40C-209ENST00000565511 IL17RAQ96F46 866 aa26.99■■□□□ 1.91
RAB40C-209ENST00000565511 RNF26Q9BY78 433 aaPredicted RBP26.99■■□□□ 1.91
RAB40C-209ENST00000565511 ADGRA3Q8IWK6 1321 aa26.98■■□□□ 1.91
RAB40C-209ENST00000565511 IGSF9BQ9UPX0 1349 aa26.98■■□□□ 1.91
RAB40C-209ENST00000565511 CRIPAKQ8N1N5 446 aa26.98■■□□□ 1.91
RAB40C-209ENST00000565511 ZNF689Q96CS4 500 aaPredicted RBP26.98■■□□□ 1.91
RAB40C-209ENST00000565511 SAMD11Q96NU1 681 aa26.98■■□□□ 1.91
RAB40C-209ENST00000565511 ZNF577Q9BSK1 485 aa26.98■■□□□ 1.91
RAB40C-209ENST00000565511 CELF4Q9BZC1 486 aaKnown RBP26.98■■□□□ 1.91
RAB40C-209ENST00000565511 TMX1Q9H3N1 280 aa26.98■■□□□ 1.91
RAB40C-209ENST00000565511 UBE2ZQ9H832 354 aaPredicted RBP26.98■■□□□ 1.91
RAB40C-209ENST00000565511 CDHR5Q9HBB8 845 aa26.98■■□□□ 1.91
RAB40C-209ENST00000565511 ZSWIM6Q9HCJ5 1215 aa26.98■■□□□ 1.91
RAB40C-209ENST00000565511 ZNF302Q9NR11 478 aa26.98■■□□□ 1.91
RAB40C-209ENST00000565511 SMIM35A0A1B0GVV1 85 aa26.97■■□□□ 1.91
RAB40C-209ENST00000565511 KLRC1P26715 233 aa26.97■■□□□ 1.91
RAB40C-209ENST00000565511 PSMA5P28066 241 aa26.97■■□□□ 1.91
RAB40C-209ENST00000565511 TMEM266Q2M3C6 531 aa26.97■■□□□ 1.91
RAB40C-209ENST00000565511 PRR16Q569H4 304 aa26.97■■□□□ 1.91
RAB40C-209ENST00000565511 SWSAP1Q6NVH7 229 aa26.97■■□□□ 1.91
RAB40C-209ENST00000565511 PDXDC2PQ6P474 469 aa26.97■■□□□ 1.91
RAB40C-209ENST00000565511 RUFY3Q7L099 469 aa26.97■■□□□ 1.91
RAB40C-209ENST00000565511 PADI3Q9ULW8 664 aa26.97■■□□□ 1.91
RAB40C-209ENST00000565511 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.96■■□□□ 1.91
RAB40C-209ENST00000565511 HBP1O60381 514 aa26.96■■□□□ 1.91
RAB40C-209ENST00000565511 CIITAP33076 1130 aa26.96■■□□□ 1.91
RAB40C-209ENST00000565511 CTNNB1P35222 781 aa26.96■■□□□ 1.91
RAB40C-209ENST00000565511 IER5Q5VY09 327 aa26.96■■□□□ 1.91
RAB40C-209ENST00000565511 FAM160B1Q5W0V3 765 aa26.96■■□□□ 1.91
RAB40C-209ENST00000565511 KIAA0319LQ8IZA0 1049 aa26.96■■□□□ 1.91
RAB40C-209ENST00000565511 FIBCD1Q8N539 461 aa26.96■■□□□ 1.91
RAB40C-209ENST00000565511 CCDC12Q8WUD4 166 aaPredicted RBP26.96■■□□□ 1.91
RAB40C-209ENST00000565511 TMEM40Q8WWA1 233 aa26.96■■□□□ 1.91
RAB40C-209ENST00000565511 UPF3BQ9BZI7 483 aaKnown RBP26.96■■□□□ 1.91
RAB40C-209ENST00000565511 KDM3AQ9Y4C1 1321 aa26.95■■□□□ 1.91
RAB40C-209ENST00000565511 DGKIO75912 1065 aa26.95■■□□□ 1.9
RAB40C-209ENST00000565511 GATMP50440 423 aa26.95■■□□□ 1.9
RAB40C-209ENST00000565511 SLC26A2P50443 739 aa26.95■■□□□ 1.9
RAB40C-209ENST00000565511 SETQ01105 290 aaPredicted RBP26.95■■□□□ 1.9
RAB40C-209ENST00000565511 MIS18BP1Q6P0N0 1132 aa26.95■■□□□ 1.9
RAB40C-209ENST00000565511 GJA10Q969M2 543 aa26.95■■□□□ 1.9
RAB40C-209ENST00000565511 PPP1R16BQ96T49 567 aa26.95■■□□□ 1.9
RAB40C-209ENST00000565511 MGEA5O60502 916 aa26.94■■□□□ 1.9
RAB40C-209ENST00000565511 C22orf31O95567 290 aa26.94■■□□□ 1.9
RAB40C-209ENST00000565511 GNA11P29992 359 aa26.94■■□□□ 1.9
RAB40C-209ENST00000565511 KRT76Q01546 638 aa26.94■■□□□ 1.9
RAB40C-209ENST00000565511 AKAP17AQ02040 695 aaKnown RBP26.94■■□□□ 1.9
RAB40C-209ENST00000565511 TCEAL5Q5H9L2 206 aa26.94■■□□□ 1.9
RAB40C-209ENST00000565511 ZNF746Q6NUN9 644 aaPredicted RBP26.94■■□□□ 1.9
RAB40C-209ENST00000565511 TRMT1LQ7Z2T5 733 aaKnown RBP26.94■■□□□ 1.9
RAB40C-209ENST00000565511 AIFM3Q96NN9 605 aa26.94■■□□□ 1.9
RAB40C-209ENST00000565511 MAFBQ9Y5Q3 323 aaPredicted RBP26.94■■□□□ 1.9
RAB40C-209ENST00000565511 SQORQ9Y6N5 450 aa26.94■■□□□ 1.9
RAB40C-209ENST00000565511 COL1A2P08123 1366 aa26.94■■□□□ 1.9
RAB40C-209ENST00000565511 GRM6O15303 877 aa26.93■■□□□ 1.9
RAB40C-209ENST00000565511 DTNBO60941 627 aa26.93■■□□□ 1.9
RAB40C-209ENST00000565511 KCNA5P22460 613 aa26.93■■□□□ 1.9
RAB40C-209ENST00000565511 PAK2Q13177 524 aa26.93■■□□□ 1.9
RAB40C-209ENST00000565511 CCDC148Q8NFR7 591 aa26.93■■□□□ 1.9
RAB40C-209ENST00000565511 KHSRPQ92945 711 aaKnown RBP eCLIP26.93■■□□□ 1.9
RAB40C-209ENST00000565511 CLP1Q92989 425 aaKnown RBP26.93■■□□□ 1.9
RAB40C-209ENST00000565511 ERVK-5Q9HDB9 667 aa26.93■■□□□ 1.9
RAB40C-209ENST00000565511 NOC2LQ9Y3T9 749 aaKnown RBP26.93■■□□□ 1.9
RAB40C-209ENST00000565511 MRPL42Q9Y6G3 142 aaKnown RBP26.93■■□□□ 1.9
RAB40C-209ENST00000565511 FNDC1Q4ZHG4 1894 aaPredicted RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms