RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CLIC4Q9Y696 253 aa29.16■■■□□ 2.26
NME3-208ENST00000565379 STK24Q9Y6E0 443 aa29.16■■■□□ 2.26
NME3-208ENST00000565379 PRUNE2Q8WUY3 3088 aa29.16■■■□□ 2.26
NME3-208ENST00000565379 YEATS4O95619 227 aa29.15■■■□□ 2.26
NME3-208ENST00000565379 FOSL2P15408 326 aa29.15■■■□□ 2.26
NME3-208ENST00000565379 DNAJB2P25686 324 aa29.15■■■□□ 2.26
NME3-208ENST00000565379 FXR2P51116 673 aaKnown RBP eCLIP29.15■■■□□ 2.26
NME3-208ENST00000565379 HERVK_113Q902F9 699 aa29.15■■■□□ 2.26
NME3-208ENST00000565379 UNC45AQ9H3U1 944 aa29.15■■■□□ 2.26
NME3-208ENST00000565379 GSTTP1A0A1W2PQM5 241 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 CCNE2O96020 404 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 PSAPP07602 524 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 SUPT20HL2P0C7V6 817 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 PSEN2P49810 448 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 KRT85P78386 507 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 SP4Q02446 784 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 PDIA5Q14554 519 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 SLC39A14Q15043 492 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 PTPAQ15257 358 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 MIER3Q7Z3K6 550 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 DEFB128Q7Z7B8 93 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 DHX38Q92620 1227 aaKnown RBP29.14■■■□□ 2.26
NME3-208ENST00000565379 GJA10Q969M2 543 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 UIMC1Q96RL1 719 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 DISC1Q9NRI5 854 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 SAMM50Q9Y512 469 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 DOCK5Q9H7D0 1870 aa29.14■■■□□ 2.26
NME3-208ENST00000565379 FGBP02675 491 aa29.13■■■□□ 2.25
NME3-208ENST00000565379 TCF7P36402 384 aaPredicted RBP29.13■■■□□ 2.25
NME3-208ENST00000565379 HIC1Q14526 733 aa29.13■■■□□ 2.25
NME3-208ENST00000565379 ABHD15Q6UXT9 468 aa29.13■■■□□ 2.25
NME3-208ENST00000565379 KATNAL1Q9BW62 490 aa29.13■■■□□ 2.25
NME3-208ENST00000565379 PBX4Q9BYU1 374 aa29.13■■■□□ 2.25
NME3-208ENST00000565379 AZI2Q9H6S1 392 aa29.13■■■□□ 2.25
NME3-208ENST00000565379 HDAC6Q9UBN7 1215 aa29.13■■■□□ 2.25
NME3-208ENST00000565379 CHD7Q9P2D1 2997 aa29.13■■■□□ 2.25
NME3-208ENST00000565379 TET1Q8NFU7 2136 aa29.12■■■□□ 2.25
NME3-208ENST00000565379 DNM1Q05193 864 aaKnown RBP29.12■■■□□ 2.25
NME3-208ENST00000565379 PTPN11Q06124 597 aaPredicted RBP29.12■■■□□ 2.25
NME3-208ENST00000565379 SPIRE1Q08AE8 756 aa29.12■■■□□ 2.25
NME3-208ENST00000565379 MFSD10Q14728 455 aa29.12■■■□□ 2.25
NME3-208ENST00000565379 STK38Q15208 465 aa29.12■■■□□ 2.25
NME3-208ENST00000565379 PTGISQ16647 500 aa29.12■■■□□ 2.25
NME3-208ENST00000565379 FAM160B1Q5W0V3 765 aa29.12■■■□□ 2.25
NME3-208ENST00000565379 LINC00301Q8NCQ3 95 aa29.12■■■□□ 2.25
NME3-208ENST00000565379 SMARCAD1Q9H4L7 1026 aa29.12■■■□□ 2.25
NME3-208ENST00000565379 EMSYQ7Z589 1322 aa29.12■■■□□ 2.25
NME3-208ENST00000565379 TRIP12Q14669 1992 aaPredicted RBP29.12■■■□□ 2.25
NME3-208ENST00000565379 IGKV6D-21A0A0A0MT36 114 aa29.11■■■□□ 2.25
NME3-208ENST00000565379 LGR5O75473 907 aa29.11■■■□□ 2.25
NME3-208ENST00000565379 F2P00734 622 aa29.11■■■□□ 2.25
NME3-208ENST00000565379 TECP42680 631 aa29.11■■■□□ 2.25
NME3-208ENST00000565379 SLC26A2P50443 739 aa29.11■■■□□ 2.25
NME3-208ENST00000565379 ZNF200P98182 395 aaPredicted RBP29.11■■■□□ 2.25
NME3-208ENST00000565379 CEBPZQ03701 1054 aaKnown RBP29.11■■■□□ 2.25
NME3-208ENST00000565379 GRIN2CQ14957 1233 aa29.11■■■□□ 2.25
NME3-208ENST00000565379 EPHA7Q15375 998 aa29.11■■■□□ 2.25
NME3-208ENST00000565379 PLPPR4Q7Z2D5 763 aa29.11■■■□□ 2.25
NME3-208ENST00000565379 NEK9Q8TD19 979 aa29.11■■■□□ 2.25
NME3-208ENST00000565379 KCNG4Q8TDN1 519 aa29.11■■■□□ 2.25
NME3-208ENST00000565379 TFIP11Q9UBB9 837 aaKnown RBP29.11■■■□□ 2.25
NME3-208ENST00000565379 ZNF215Q9UL58 517 aaPredicted RBP29.11■■■□□ 2.25
NME3-208ENST00000565379 TANC1Q9C0D5 1861 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 HAS3O00219 553 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 CHMP2AO43633 222 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 DKC1O60832 514 aaKnown RBP eCLIP29.1■■■□□ 2.25
NME3-208ENST00000565379 PPP6R2O75170 966 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 LGALS2P05162 132 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 KIAA0753Q2KHM9 967 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 FOXD4L6Q3SYB3 417 aaPredicted RBP29.1■■■□□ 2.25
NME3-208ENST00000565379 FOXD4L3Q6VB84 417 aaPredicted RBP29.1■■■□□ 2.25
NME3-208ENST00000565379 SESTD1Q86VW0 696 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 ERMNQ8TAM6 284 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 AFAP1L1Q8TED9 768 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 WNT8BQ93098 351 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 AK8Q96MA6 479 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 FTOQ9C0B1 505 aaKnown RBP eCLIP29.1■■■□□ 2.25
NME3-208ENST00000565379 SCAND2PQ9GZW5 306 aaPredicted RBP29.1■■■□□ 2.25
NME3-208ENST00000565379 ZNF576Q9H609 170 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 NOD1Q9Y239 953 aa29.1■■■□□ 2.25
NME3-208ENST00000565379 MYO9BQ13459 2157 aa29.09■■■□□ 2.25
NME3-208ENST00000565379 GBF1Q92538 1859 aa29.09■■■□□ 2.25
NME3-208ENST00000565379 BACH1O14867 736 aa29.09■■■□□ 2.25
NME3-208ENST00000565379 SPTLC2O15270 562 aa29.09■■■□□ 2.25
NME3-208ENST00000565379 STAT5BP51692 787 aa29.09■■■□□ 2.25
NME3-208ENST00000565379 NCAPH2Q6IBW4 605 aa29.09■■■□□ 2.25
NME3-208ENST00000565379 IGSF22Q8N9C0 903 aa29.09■■■□□ 2.25
NME3-208ENST00000565379 TNPO1Q92973 898 aaKnown RBP29.09■■■□□ 2.25
NME3-208ENST00000565379 TIFAQ96CG3 184 aa29.09■■■□□ 2.25
NME3-208ENST00000565379 GTF2IRD1Q9UHL9 959 aa29.09■■■□□ 2.25
NME3-208ENST00000565379 SRPRBQ9Y5M8 271 aaKnown RBP29.09■■■□□ 2.25
NME3-208ENST00000565379 MYH15Q9Y2K3 1946 aa29.08■■■□□ 2.25
NME3-208ENST00000565379 IQCF3P0C7M6 154 aa29.08■■■□□ 2.25
NME3-208ENST00000565379 LONP1P36776 959 aaKnown RBP29.08■■■□□ 2.25
NME3-208ENST00000565379 RABGGTBP53611 331 aa29.08■■■□□ 2.25
NME3-208ENST00000565379 UTP14CQ5TAP6 766 aaKnown RBP29.08■■■□□ 2.25
NME3-208ENST00000565379 HAUS3Q68CZ6 603 aa29.08■■■□□ 2.25
NME3-208ENST00000565379 GLG1Q92896 1179 aa29.08■■■□□ 2.25
NME3-208ENST00000565379 ATP6V0A1Q93050 837 aa29.08■■■□□ 2.25
NME3-208ENST00000565379 C16orf70Q9BSU1 422 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms