RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 ZCWPW2Q504Y3 356 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 CREBRFQ8IUR6 639 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 FGFBP2Q9BYJ0 223 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 PARVGQ9HBI0 331 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 LOC102724159A0A0B4J2E5 919 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 PSAPP07602 524 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 PBX1P40424 430 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 RARRES1P49788 294 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 ZNF131P52739 623 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 FSTL1Q12841 308 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 ARID5BQ14865 1188 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 PWP2Q15269 919 aaKnown RBP21.66■■□□□ 1.06
CLN6-205ENST00000564846 PADI6Q6TGC4 694 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 EPM2AIP1Q7L775 607 aaPredicted RBP21.66■■□□□ 1.06
CLN6-205ENST00000564846 ATP6V0A1Q93050 837 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 R3HDMLQ9H3Y0 253 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 ANKEF1Q9NU02 776 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 TAB2Q9NYJ8 693 aa21.66■■□□□ 1.06
CLN6-205ENST00000564846 TEX33O43247 280 aa21.65■■□□□ 1.06
CLN6-205ENST00000564846 CLCN1P35523 988 aa21.65■■□□□ 1.06
CLN6-205ENST00000564846 TBX2Q13207 712 aaPredicted RBP21.65■■□□□ 1.06
CLN6-205ENST00000564846 UGCGQ16739 394 aa21.65■■□□□ 1.06
CLN6-205ENST00000564846 PPP4R3CPQ6ZMV5 832 aa21.65■■□□□ 1.06
CLN6-205ENST00000564846 CNOT6LQ96LI5 555 aaKnown RBP21.65■■□□□ 1.06
CLN6-205ENST00000564846 VPS16Q9H269 839 aa21.65■■□□□ 1.06
CLN6-205ENST00000564846 MRPL44Q9H9J2 332 aaKnown RBP21.65■■□□□ 1.06
CLN6-205ENST00000564846 TPM2P07951 284 aa21.64■■□□□ 1.06
CLN6-205ENST00000564846 TGFB3P10600 412 aa21.64■■□□□ 1.06
CLN6-205ENST00000564846 ACTR2P61160 394 aa21.64■■□□□ 1.06
CLN6-205ENST00000564846 FKBP3Q00688 224 aaKnown RBP21.64■■□□□ 1.06
CLN6-205ENST00000564846 BMT2Q1RMZ1 405 aa21.64■■□□□ 1.06
CLN6-205ENST00000564846 WDR78Q5VTH9 848 aa21.64■■□□□ 1.06
CLN6-205ENST00000564846 ARMCX5Q6P1M9 558 aa21.64■■□□□ 1.06
CLN6-205ENST00000564846 SEPT14Q6ZU15 432 aa21.64■■□□□ 1.06
CLN6-205ENST00000564846 MYCT1Q8N699 235 aa21.64■■□□□ 1.06
CLN6-205ENST00000564846 KIAA1524Q8TCG1 905 aa21.64■■□□□ 1.06
CLN6-205ENST00000564846 ZNF526Q8TF50 670 aaPredicted RBP21.64■■□□□ 1.06
CLN6-205ENST00000564846 CCDC43Q96MW1 224 aaKnown RBP21.64■■□□□ 1.06
CLN6-205ENST00000564846 TIPINQ9BVW5 301 aa21.64■■□□□ 1.06
CLN6-205ENST00000564846 KCTD10Q9H3F6 313 aa21.64■■□□□ 1.06
CLN6-205ENST00000564846 MORF4L1Q9UBU8 362 aa21.64■■□□□ 1.06
CLN6-205ENST00000564846 SOCS7O14512 581 aa21.64■■□□□ 1.05
CLN6-205ENST00000564846 NRDCO43847 1150 aa21.64■■□□□ 1.05
CLN6-205ENST00000564846 PGK2P07205 417 aa21.64■■□□□ 1.05
CLN6-205ENST00000564846 HUNKP57058 714 aa21.64■■□□□ 1.05
CLN6-205ENST00000564846 MIS18BP1Q6P0N0 1132 aa21.64■■□□□ 1.05
CLN6-205ENST00000564846 PARK7Q99497 189 aaKnown RBP21.64■■□□□ 1.05
CLN6-205ENST00000564846 TUBGCP2Q9BSJ2 902 aa21.64■■□□□ 1.05
CLN6-205ENST00000564846 PYCARDQ9ULZ3 195 aa21.64■■□□□ 1.05
CLN6-205ENST00000564846 ITIH6Q6UXX5 1313 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 LGALS16A8MUM7 142 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 EIF3DO15371 548 aaKnown RBP eCLIP21.63■■□□□ 1.05
CLN6-205ENST00000564846 CASP5P51878 434 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 SP2Q02086 613 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 KNOP1Q1ED39 458 aaKnown RBP21.63■■□□□ 1.05
CLN6-205ENST00000564846 EDRF1Q3B7T1 1238 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 ABHD15Q6UXT9 468 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 LRRC55Q6ZSA7 311 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 OTUD6AQ7L8S5 288 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 NELFCDQ8IXH7 590 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 ANKRD13CQ8N6S4 541 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 ZNF507Q8TCN5 953 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 FGD4Q96M96 766 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 PORCNQ9H237 461 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 EFCC1Q9HA90 598 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 GABBR1Q9UBS5 961 aa21.63■■□□□ 1.05
CLN6-205ENST00000564846 KIAA1217Q5T5P2 1943 aa21.62■■□□□ 1.05
CLN6-205ENST00000564846 GCNT3O95395 438 aa21.62■■□□□ 1.05
CLN6-205ENST00000564846 NEDD9Q14511 834 aa21.62■■□□□ 1.05
CLN6-205ENST00000564846 PTPN21Q16825 1174 aa21.62■■□□□ 1.05
CLN6-205ENST00000564846 KCNV1Q6PIU1 500 aa21.62■■□□□ 1.05
CLN6-205ENST00000564846 STXBP4Q6ZWJ1 553 aa21.62■■□□□ 1.05
CLN6-205ENST00000564846 EEF2KMTQ96G04 330 aa21.62■■□□□ 1.05
CLN6-205ENST00000564846 CEP63Q96MT8 703 aa21.62■■□□□ 1.05
CLN6-205ENST00000564846 BCAS3Q9H6U6 928 aa21.62■■□□□ 1.05
CLN6-205ENST00000564846 SFI1A8K8P3 1242 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 HIP1RO75146 1068 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 SUPT20HL2P0C7V6 817 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 MYBP10242 640 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 SKILP12757 684 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 PRKCSHP14314 528 aaPredicted RBP21.61■■□□□ 1.05
CLN6-205ENST00000564846 MTIF2P46199 727 aaKnown RBP21.61■■□□□ 1.05
CLN6-205ENST00000564846 CCZ1BP86790 482 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 CCZ1P86791 482 aaPredicted RBP21.61■■□□□ 1.05
CLN6-205ENST00000564846 SWSAP1Q6NVH7 229 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 CYFIP1Q7L576 1253 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 MORC4Q8TE76 937 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 TRAF3IP3Q9Y228 551 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 UBE4BO95155 1302 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 ATG7O95352 703 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 GNA14O95837 355 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 UBA1P22314 1058 aaKnown RBP21.61■■□□□ 1.05
CLN6-205ENST00000564846 DNM2P50570 870 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 UBXN1Q04323 297 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 FAM178BQ8IXR5 827 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 ABRAQ8N0Z2 381 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 CCDC112Q8NEF3 446 aa21.61■■□□□ 1.05
CLN6-205ENST00000564846 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.61■■□□□ 1.05
CLN6-205ENST00000564846 A0A1W2PQC6 194 aa21.6■■□□□ 1.05
CLN6-205ENST00000564846 PDXKO00764 312 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms