RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 RBM46Q8TBY0 533 aaKnown RBP22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 NOD2Q9HC29 1040 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 MYH7BA7E2Y1 1941 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 LOC102724428A0A0B4J2F2 783 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 GFPT2O94808 682 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 SLURP2P0DP57 97 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 PPP1R2P41236 205 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 SIK1P57059 783 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 LRRC34Q8IZ02 419 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 KIF2BQ8N4N8 673 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 EYA3Q99504 573 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 PRMT1Q99873 361 aaKnown RBP22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 ACTR5Q9H9F9 607 aaPredicted RBP22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 SRP68Q9UHB9 627 aaKnown RBP22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 TMEM59LQ9UK28 342 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 ATXN2Q99700 1313 aaKnown RBP22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 MYH1P12882 1939 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 MYH4Q9Y623 1939 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 F8VZ95 297 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 KRT13P13646 458 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 CUL1Q13616 776 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 GPBP1Q86WP2 473 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 CCT6BQ92526 530 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 DNAJC19Q96DA6 116 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 IQCDQ96DY2 449 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 CEP95Q96GE4 821 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 AZI2Q9H6S1 392 aa22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 UTP11Q9Y3A2 253 aaKnown RBP22.34■■□□□ 1.17
MAP1LC3B-206ENST00000564844 TMEM110-MUSTN1A8MSY1 372 aa22.33■■□□□ 1.17
MAP1LC3B-206ENST00000564844 TRIM37O94972 964 aa22.33■■□□□ 1.17
MAP1LC3B-206ENST00000564844 RASA1P20936 1047 aa22.33■■□□□ 1.17
MAP1LC3B-206ENST00000564844 SLC16A2P36021 539 aa22.33■■□□□ 1.17
MAP1LC3B-206ENST00000564844 ELF3P78545 371 aaPredicted RBP22.33■■□□□ 1.17
MAP1LC3B-206ENST00000564844 CCDC25Q86WR0 208 aa22.33■■□□□ 1.17
MAP1LC3B-206ENST00000564844 TPCN2Q8NHX9 752 aa22.33■■□□□ 1.17
MAP1LC3B-206ENST00000564844 PRCCQ92733 491 aaPredicted RBP22.33■■□□□ 1.17
MAP1LC3B-206ENST00000564844 CHMP6Q96FZ7 201 aa22.33■■□□□ 1.17
MAP1LC3B-206ENST00000564844 XPO6Q96QU8 1125 aaKnown RBP22.33■■□□□ 1.17
MAP1LC3B-206ENST00000564844 TMOD4Q9NZQ9 345 aa22.33■■□□□ 1.17
MAP1LC3B-206ENST00000564844 EDIL3O43854 480 aa22.33■■□□□ 1.16
MAP1LC3B-206ENST00000564844 IRF2BP2Q7Z5L9 587 aa22.33■■□□□ 1.16
MAP1LC3B-206ENST00000564844 DAGLBQ8NCG7 672 aa22.33■■□□□ 1.16
MAP1LC3B-206ENST00000564844 MTMR9Q96QG7 549 aa22.33■■□□□ 1.16
MAP1LC3B-206ENST00000564844 PAGR1Q9BTK6 254 aa22.33■■□□□ 1.16
MAP1LC3B-206ENST00000564844 A1CFQ9NQ94 594 aaKnown RBP22.33■■□□□ 1.16
MAP1LC3B-206ENST00000564844 EMILIN3Q9NT22 766 aa22.33■■□□□ 1.16
MAP1LC3B-206ENST00000564844 HDAC9Q9UKV0 1011 aa22.33■■□□□ 1.16
MAP1LC3B-206ENST00000564844 STK38LQ9Y2H1 464 aa22.33■■□□□ 1.16
MAP1LC3B-206ENST00000564844 SFI1A8K8P3 1242 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 MYBP10242 640 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 UCHL3P15374 230 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 PEX19P40855 299 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 SCFD1Q8WVM8 642 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 FMO2Q99518 471 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 ERVK-5Q9HDB9 667 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 DBR1Q9UK59 544 aaKnown RBP22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 PCDHB13Q9Y5F0 798 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 MMP14P50281 582 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 LRIG3Q6UXM1 1119 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 TRIM59Q8IWR1 403 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 CCDC197Q8NCU1 140 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 BMP2KQ9NSY1 1161 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 RTCBQ9Y3I0 505 aaKnown RBP22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 CACNA1SQ13698 1873 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 BIRC3Q13489 604 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 FBXO33Q7Z6M2 555 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 CCDC63Q8NA47 563 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 RIC8AQ9NPQ8 531 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 ABCF3Q9NUQ8 709 aa22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 BSDC1Q9NW68 430 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3B-206ENST00000564844 ATP6V1G2O95670 118 aa22.31■■□□□ 1.16
MAP1LC3B-206ENST00000564844 CASP4P49662 377 aa22.31■■□□□ 1.16
MAP1LC3B-206ENST00000564844 EMC10Q5UCC4 262 aa22.31■■□□□ 1.16
MAP1LC3B-206ENST00000564844 NSMCE1Q8WV22 266 aa22.31■■□□□ 1.16
MAP1LC3B-206ENST00000564844 GANQ9H2C0 597 aa22.31■■□□□ 1.16
MAP1LC3B-206ENST00000564844 STK17AQ9UEE5 414 aa22.31■■□□□ 1.16
MAP1LC3B-206ENST00000564844 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.31■■□□□ 1.16
MAP1LC3B-206ENST00000564844 A8MUI8 341 aa22.31■■□□□ 1.16
MAP1LC3B-206ENST00000564844 ZCWPW2Q504Y3 356 aa22.31■■□□□ 1.16
MAP1LC3B-206ENST00000564844 WLSQ5T9L3 541 aa22.31■■□□□ 1.16
MAP1LC3B-206ENST00000564844 PPP1R9AQ9ULJ8 1098 aa22.31■■□□□ 1.16
MAP1LC3B-206ENST00000564844 ZNF142P52746 1687 aaPredicted RBP22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 CCT8L1PA6NM43 557 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 FGFR4P22455 802 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 KCNA1Q09470 495 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 PICALMQ13492 652 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 SLC29A2Q14542 456 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 PARP10Q53GL7 1025 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 GALNT17Q6IS24 598 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 SLC30A10Q6XR72 485 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 GLYCTKQ8IVS8 523 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 LRRC57Q8N9N7 239 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 PCDHA12Q9UN75 941 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 POTEFA5A3E0 1075 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 POTEIP0CG38 1075 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 KCNJ2P63252 427 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 EXOC3L4Q17RC7 722 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 SBK1Q52WX2 424 aa22.3■■□□□ 1.16
MAP1LC3B-206ENST00000564844 NAIF1Q69YI7 327 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms