RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 MIER3Q7Z3K6 550 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 CCDC60Q8IWA6 550 aaPredicted RBP11.22□□□□□ -0.61
CDH1-206ENST00000564676 FBXO18Q8NFZ0 1043 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 ATP8B4Q8TF62 1192 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 HERVK_113Q902F9 699 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 TSPYL2Q9H2G4 693 aaPredicted RBP11.22□□□□□ -0.61
CDH1-206ENST00000564676 UNC45AQ9H3U1 944 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 GABBR1Q9UBS5 961 aa11.22□□□□□ -0.61
CDH1-206ENST00000564676 ZBBXA8MT70 800 aa11.21□□□□□ -0.61
CDH1-206ENST00000564676 RSPH10B2B2RC85 870 aa11.21□□□□□ -0.61
CDH1-206ENST00000564676 PSMD10O75832 226 aa11.21□□□□□ -0.61
CDH1-206ENST00000564676 BAG4O95429 457 aaKnown RBP11.21□□□□□ -0.61
CDH1-206ENST00000564676 CTSHP09668 335 aa11.21□□□□□ -0.61
CDH1-206ENST00000564676 RSPH10BP0C881 870 aa11.21□□□□□ -0.61
CDH1-206ENST00000564676 JAK3P52333 1124 aa11.21□□□□□ -0.61
CDH1-206ENST00000564676 RSPH3Q86UC2 560 aa11.21□□□□□ -0.61
CDH1-206ENST00000564676 RDM1Q8NG50 284 aa11.21□□□□□ -0.61
CDH1-206ENST00000564676 ETNPPLQ8TBG4 499 aa11.21□□□□□ -0.61
CDH1-206ENST00000564676 FAM20AQ96MK3 541 aa11.21□□□□□ -0.61
CDH1-206ENST00000564676 TUBE1Q9UJT0 475 aa11.21□□□□□ -0.61
CDH1-206ENST00000564676 SMC3Q9UQE7 1217 aa11.21□□□□□ -0.61
CDH1-206ENST00000564676 TET1Q8NFU7 2136 aa11.21□□□□□ -0.62
CDH1-206ENST00000564676 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.2□□□□□ -0.62
CDH1-206ENST00000564676 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.2□□□□□ -0.62
CDH1-206ENST00000564676 MBLAC1A4D2B0 266 aaPredicted RBP11.2□□□□□ -0.62
CDH1-206ENST00000564676 TBX3O15119 743 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 CAND2O75155 1236 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 ATP4AP20648 1035 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 ZNF484Q5JVG2 852 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 RUFY4Q6ZNE9 571 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 SLFN12Q8IYM2 578 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 TRAPPC12Q8WVT3 735 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 DNAJB3Q8WWF6 145 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
CDH1-206ENST00000564676 VWCEQ96DN2 955 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 FAM167AQ96KS9 214 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 FAM49AQ9H0Q0 323 aaPredicted RBP11.2□□□□□ -0.62
CDH1-206ENST00000564676 FOXP1Q9H334 677 aaPredicted RBP11.2□□□□□ -0.62
CDH1-206ENST00000564676 KCNMB3Q9NPA1 279 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 NRBP2Q9NSY0 501 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 CXXC1Q9P0U4 656 aaPredicted RBP11.2□□□□□ -0.62
CDH1-206ENST00000564676 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.2□□□□□ -0.62
CDH1-206ENST00000564676 MAFBQ9Y5Q3 323 aaPredicted RBP11.2□□□□□ -0.62
CDH1-206ENST00000564676 SLC4A7Q9Y6M7 1214 aa11.2□□□□□ -0.62
CDH1-206ENST00000564676 H3BQV1 296 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 NBNO60934 754 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 KLRC1P26715 233 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 GJB2P29033 226 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 SMAD3P84022 425 aaKnown RBP11.19□□□□□ -0.62
CDH1-206ENST00000564676 GPNMBQ14956 572 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 CALCRLQ16602 461 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 MARCH8Q5T0T0 291 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 RASIP1Q5U651 963 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 TRAF7Q6Q0C0 670 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 MTHFD1LQ6UB35 978 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 HAS1Q92839 578 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 ZBTB10Q96DT7 871 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 NOL7Q9UMY1 257 aaKnown RBP11.19□□□□□ -0.62
CDH1-206ENST00000564676 CEP131Q9UPN4 1083 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 PCDHA2Q9Y5H9 948 aa11.19□□□□□ -0.62
CDH1-206ENST00000564676 RANBP2P49792 3224 aaKnown RBP11.18□□□□□ -0.62
CDH1-206ENST00000564676 COL1A2P08123 1366 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 IGSF9BQ9UPX0 1349 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 WDR81Q562E7 1941 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 GRXCR1A8MXD5 290 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 M0QZ92 97 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 EML1O00423 815 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 NEMFO60524 1076 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 CXCL10P02778 98 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 OATP04181 439 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 RPLP2P05387 115 aaKnown RBP11.18□□□□□ -0.62
CDH1-206ENST00000564676 MCM7P33993 719 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 PRKCEQ02156 737 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 PPP2R5CQ13362 524 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 MBTPS1Q14703 1052 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 ZNF174Q15697 407 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 UGCGQ16739 394 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 MCTP1Q6DN14 999 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 NCAPH2Q6IBW4 605 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 CNKSR3Q6P9H4 555 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 B3GNT9Q6UX72 402 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 RPAINQ86UA6 219 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 MS4A3Q96HJ5 214 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 VAV3Q9UKW4 847 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 TANC1Q9C0D5 1861 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 EVPLQ92817 2033 aa11.18□□□□□ -0.62
CDH1-206ENST00000564676 SMIM35A0A1B0GVV1 85 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 ABHD14A-ACY1A0A1B0GW23 586 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 WNT7AO00755 349 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 ZNF862O60290 1169 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 DKC1O60832 514 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDH1-206ENST00000564676 BAIAP3O94812 1187 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 CHRNA1P02708 482 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 ATP2A2P16615 1042 aaKnown RBP11.17□□□□□ -0.62
CDH1-206ENST00000564676 TXKP42681 527 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 KCNJ6P48051 423 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 PSMC5P62195 406 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 MRPS6P82932 125 aaKnown RBP11.17□□□□□ -0.62
CDH1-206ENST00000564676 TMEM62Q0P6H9 643 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms