RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CIITAP33076 1130 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 IGBP1P78318 339 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 TFF2Q03403 129 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 PKN1Q16512 942 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 ZNF484Q5JVG2 852 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 ODR4Q5SWX8 454 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 JAKMIP3Q5VZ66 844 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 ZNF746Q6NUN9 644 aaPredicted RBP13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 MTHFD1LQ6UB35 978 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 FAM177A1Q8N128 213 aaPredicted RBP13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 REXO1Q8N1G1 1221 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 ZNF710Q8N1W2 664 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 FIBCD1Q8N539 461 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 CCDC148Q8NFR7 591 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 PGBD1Q96JS3 809 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 CELF4Q9BZC1 486 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 OSBPL7Q9BZF2 842 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 TMEM260Q9NX78 707 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 TRPV2Q9Y5S1 764 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 BDP1A6H8Y1 2624 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 COL4A6Q14031 1691 aa13.85□□□□□ -0.19
GTF3C1-204ENST00000564664 COL1A2P08123 1366 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 IGLV3-22A0A075B6J6 115 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 FAM86B1E9PN63 330 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 C5orf67F2Z3F1 127 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 BACH1O14867 736 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 DHX15O43143 795 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 FAM86B2P0C5J1 330 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 USP11P51784 963 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 GPM6BQ13491 265 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 NTRK3Q16288 839 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 PUS10Q3MIT2 529 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 TIGD5Q53EQ6 642 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 RUFY3Q7L099 469 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 SMAP1Q8IYB5 467 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 ATP8B4Q8TF62 1192 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 ZNF577Q9BSK1 485 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 C22orf23Q9BZE7 217 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 LMAN2LQ9H0V9 348 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 ZNF302Q9NR11 478 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 TCEAL9Q9UHQ7 104 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 MUC3AQ02505 3323 aa13.84□□□□□ -0.19
GTF3C1-204ENST00000564664 TTC3P53804 2025 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 SIP14410 1827 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 CCNE2O96020 404 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 STAG3L1P0CL83 205 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 CPA1P15085 419 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 KLRC1P26715 233 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 PDIA3P30101 505 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 BMPR1AP36894 532 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 KCNQ1P51787 676 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 KRT76Q01546 638 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 NAALADL2Q58DX5 795 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 PDXDC2PQ6P474 469 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 TRIM22Q8IYM9 498 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 BBXQ8WY36 941 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 CLP1Q92989 425 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 ZNF689Q96CS4 500 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 ZNF274Q96GC6 653 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 C11orf84Q9BUA3 381 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 PLVAPQ9BX97 442 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 TM6SF1Q9BZW5 370 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 FAM49AQ9H0Q0 323 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 ZSWIM6Q9HCJ5 1215 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 CEP131Q9UPN4 1083 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 PCDHA10Q9Y5I2 948 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 MAFBQ9Y5Q3 323 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 IGSF9BQ9UPX0 1349 aa13.83□□□□□ -0.2
GTF3C1-204ENST00000564664 DGKIO75912 1065 aa13.82□□□□□ -0.2
GTF3C1-204ENST00000564664 PSAPP07602 524 aa13.82□□□□□ -0.2
GTF3C1-204ENST00000564664 LEXMQ3ZCV2 418 aa13.82□□□□□ -0.2
GTF3C1-204ENST00000564664 SWSAP1Q6NVH7 229 aa13.82□□□□□ -0.2
GTF3C1-204ENST00000564664 NPAS4Q8IUM7 802 aa13.82□□□□□ -0.2
GTF3C1-204ENST00000564664 UBE2ZQ9H832 354 aaPredicted RBP13.82□□□□□ -0.2
GTF3C1-204ENST00000564664 AGO3Q9H9G7 860 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-204ENST00000564664 PADI3Q9ULW8 664 aa13.82□□□□□ -0.2
GTF3C1-204ENST00000564664 CYP46A1Q9Y6A2 500 aa13.82□□□□□ -0.2
GTF3C1-204ENST00000564664 XIRP2A4UGR9 3374 aa13.82□□□□□ -0.2
GTF3C1-204ENST00000564664 REV3LO60673 3130 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 BRWD1Q9NSI6 2320 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 MAGEB2O15479 319 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 CD52P31358 61 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 PAK2Q13177 524 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 BTG3Q14201 252 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 GALNT17Q6IS24 598 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 CPLX2Q6PUV4 134 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 RTN4RL1Q86UN2 441 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 CMTR2Q8IYT2 770 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 KIAA0319LQ8IZA0 1049 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 CRIPAKQ8N1N5 446 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 BANK1Q8NDB2 785 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 PHKBQ93100 1093 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 FAM167AQ96KS9 214 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 C1QTNF1Q9BXJ1 281 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 SLC26A6Q9BXS9 759 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 NSUN3Q9H649 340 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 RC3H2Q9HBD1 1191 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 ADGRA3Q8IWK6 1321 aa13.81□□□□□ -0.2
GTF3C1-204ENST00000564664 TCF20Q9UGU0 1960 aaKnown RBP13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 WDR64B1ANS9 1081 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms