RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 UCKL1Q9NWZ5 548 aa7.17□□□□□ -1.26
UBR1-205ENST00000564540 B3GALT1Q9Y5Z6 326 aa7.17□□□□□ -1.26
UBR1-205ENST00000564540 MRPL42Q9Y6G3 142 aaKnown RBP7.17□□□□□ -1.26
UBR1-205ENST00000564540 H0Y858 1186 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 KRT37O76014 449 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 MPIG6BO95866 241 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 ASLP04424 464 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 ZBTB48P10074 688 aaPredicted RBP7.16□□□□□ -1.26
UBR1-205ENST00000564540 TMEM132BQ14DG7 1078 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 TKFCQ3LXA3 575 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 ERICH6BQ5W0A0 696 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 LRSAM1Q6UWE0 723 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 GPR155Q7Z3F1 870 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 GGNQ86UU5 652 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 DLG3Q92796 817 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 FANCLQ9NW38 375 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 ADAM29Q9UKF5 820 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 CD2APQ9Y5K6 639 aa7.16□□□□□ -1.26
UBR1-205ENST00000564540 B4E1Z4 1266 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 FOXP2O15409 715 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 B4GALT4O60513 344 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 PLATP00750 562 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 IL13RA1P78552 427 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 OTOP1Q7RTM1 612 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 JAZF1Q86VZ6 243 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 HOMER1Q86YM7 354 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 GBP4Q96PP9 640 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 RBM15Q96T37 977 aaKnown RBP eCLIP7.15□□□□□ -1.26
UBR1-205ENST00000564540 AMNQ9BXJ7 453 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 GALNT8Q9NY28 637 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 PTPN22Q9Y2R2 807 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 ZNF536O15090 1300 aa7.15□□□□□ -1.26
UBR1-205ENST00000564540 TRAF5O00463 557 aa7.14□□□□□ -1.27
UBR1-205ENST00000564540 HIP1RO75146 1068 aa7.14□□□□□ -1.27
UBR1-205ENST00000564540 ITGB3P05106 788 aa7.14□□□□□ -1.27
UBR1-205ENST00000564540 JMJD7P0C870 316 aa7.14□□□□□ -1.27
UBR1-205ENST00000564540 ADCY8P40145 1251 aa7.14□□□□□ -1.27
UBR1-205ENST00000564540 NFKB2Q00653 900 aa7.14□□□□□ -1.27
UBR1-205ENST00000564540 CATSPEREQ5SY80 951 aa7.14□□□□□ -1.27
UBR1-205ENST00000564540 PIK3R6Q5UE93 754 aa7.14□□□□□ -1.27
UBR1-205ENST00000564540 CHST14Q8NCH0 376 aa7.14□□□□□ -1.27
UBR1-205ENST00000564540 BOCQ9BWV1 1114 aa7.14□□□□□ -1.27
UBR1-205ENST00000564540 USP35Q9P2H5 1018 aa7.14□□□□□ -1.27
UBR1-205ENST00000564540 PRAMEF22A3QJZ6 481 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 K7ESM1 405 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 LAMTOR5O43504 91 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 RFPL3O75679 317 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 ZNF888P0CJ79 500 aaPredicted RBP7.13□□□□□ -1.27
UBR1-205ENST00000564540 CSF2RBP32927 897 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 TCEA2Q15560 299 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 WDR72Q3MJ13 1102 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 DPP8Q6V1X1 898 aaPredicted RBP7.13□□□□□ -1.27
UBR1-205ENST00000564540 LIMS2Q7Z4I7 341 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 RALYLQ86SE5 291 aaKnown RBP7.13□□□□□ -1.27
UBR1-205ENST00000564540 HIPK4Q8NE63 616 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 APPBP2Q92624 585 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 ERCC4Q92889 916 aaPredicted RBP7.13□□□□□ -1.27
UBR1-205ENST00000564540 AJUBAQ96IF1 538 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 PTPN18Q99952 460 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 KATNBL1Q9H079 304 aa7.13□□□□□ -1.27
UBR1-205ENST00000564540 PTPDC1A2A3K4 754 aa7.12□□□□□ -1.27
UBR1-205ENST00000564540 DVL2O14641 736 aa7.12□□□□□ -1.27
UBR1-205ENST00000564540 POLD1P28340 1107 aa7.12□□□□□ -1.27
UBR1-205ENST00000564540 SDHAP31040 664 aa7.12□□□□□ -1.27
UBR1-205ENST00000564540 ECE1P42892 770 aa7.12□□□□□ -1.27
UBR1-205ENST00000564540 CDCA2Q69YH5 1023 aaPredicted RBP7.12□□□□□ -1.27
UBR1-205ENST00000564540 C16orf86Q6ZW13 317 aa7.12□□□□□ -1.27
UBR1-205ENST00000564540 PRRT2Q7Z6L0 340 aaPredicted RBP7.12□□□□□ -1.27
UBR1-205ENST00000564540 PLEKHH3Q7Z736 793 aa7.12□□□□□ -1.27
UBR1-205ENST00000564540 SYNPOQ8N3V7 929 aa7.12□□□□□ -1.27
UBR1-205ENST00000564540 BORCS6Q96GS4 357 aa7.12□□□□□ -1.27
UBR1-205ENST00000564540 PPP4R1LQ9P1A2 415 aa7.12□□□□□ -1.27
UBR1-205ENST00000564540 KIF11P52732 1056 aa7.11□□□□□ -1.27
UBR1-205ENST00000564540 PPP2CBP62714 309 aa7.11□□□□□ -1.27
UBR1-205ENST00000564540 PPP2CAP67775 309 aa7.11□□□□□ -1.27
UBR1-205ENST00000564540 TOP3AQ13472 1001 aaPredicted RBP7.11□□□□□ -1.27
UBR1-205ENST00000564540 STILQ15468 1287 aa7.11□□□□□ -1.27
UBR1-205ENST00000564540 ARHGAP44Q17R89 818 aa7.11□□□□□ -1.27
UBR1-205ENST00000564540 CFAP100Q494V2 611 aa7.11□□□□□ -1.27
UBR1-205ENST00000564540 ARHGEF18Q6ZSZ5 1173 aa7.11□□□□□ -1.27
UBR1-205ENST00000564540 WNK4Q96J92 1243 aa7.11□□□□□ -1.27
UBR1-205ENST00000564540 SSBP3Q9BWW4 388 aaPredicted RBP7.11□□□□□ -1.27
UBR1-205ENST00000564540 BTBD2Q9BX70 525 aa7.11□□□□□ -1.27
UBR1-205ENST00000564540 CABP5Q9NP86 173 aa7.11□□□□□ -1.27
UBR1-205ENST00000564540 MAGEC2Q9UBF1 373 aaPredicted RBP7.11□□□□□ -1.27
UBR1-205ENST00000564540 GOLGA6L22H0YM25 854 aa7.1□□□□□ -1.27
UBR1-205ENST00000564540 CBX4O00257 560 aa7.1□□□□□ -1.27
UBR1-205ENST00000564540 CDC45O75419 566 aa7.1□□□□□ -1.27
UBR1-205ENST00000564540 FLT3P36888 993 aa7.1□□□□□ -1.27
UBR1-205ENST00000564540 CD83Q01151 205 aa7.1□□□□□ -1.27
UBR1-205ENST00000564540 EFEMP1Q12805 493 aa7.1□□□□□ -1.27
UBR1-205ENST00000564540 USP10Q14694 798 aaKnown RBP7.1□□□□□ -1.27
UBR1-205ENST00000564540 SURF1Q15526 300 aa7.1□□□□□ -1.27
UBR1-205ENST00000564540 KANK2Q63ZY3 851 aa7.1□□□□□ -1.27
UBR1-205ENST00000564540 CC2D1AQ6P1N0 951 aaPredicted RBP7.1□□□□□ -1.27
UBR1-205ENST00000564540 UBE2R2Q712K3 238 aaPredicted RBP7.1□□□□□ -1.27
UBR1-205ENST00000564540 REXO1L1PQ8IX06 675 aa7.1□□□□□ -1.27
UBR1-205ENST00000564540 FOXRED1Q96CU9 486 aaPredicted RBP7.1□□□□□ -1.27
UBR1-205ENST00000564540 OR10A5Q9H207 317 aa7.1□□□□□ -1.27
UBR1-205ENST00000564540 JADE2Q9NQC1 790 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms