RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 CTDNEP1O95476 244 aa28.65■■■□□ 2.18
AC009041.3-201ENST00000564390 AMHP03971 560 aa28.65■■■□□ 2.18
AC009041.3-201ENST00000564390 SLC26A2P50443 739 aa28.65■■■□□ 2.18
AC009041.3-201ENST00000564390 TMEM62Q0P6H9 643 aa28.65■■■□□ 2.18
AC009041.3-201ENST00000564390 ZNF746Q6NUN9 644 aaPredicted RBP28.65■■■□□ 2.18
AC009041.3-201ENST00000564390 ATP8B4Q8TF62 1192 aa28.65■■■□□ 2.18
AC009041.3-201ENST00000564390 GJA10Q969M2 543 aa28.65■■■□□ 2.18
AC009041.3-201ENST00000564390 TDP2O95551 362 aa28.64■■■□□ 2.18
AC009041.3-201ENST00000564390 USP11P51784 963 aa28.64■■■□□ 2.18
AC009041.3-201ENST00000564390 MRPS6P82932 125 aaKnown RBP28.64■■■□□ 2.18
AC009041.3-201ENST00000564390 KRT76Q01546 638 aa28.64■■■□□ 2.18
AC009041.3-201ENST00000564390 LPIN1Q14693 890 aa28.64■■■□□ 2.18
AC009041.3-201ENST00000564390 CCDC85BQ15834 202 aaPredicted RBP28.64■■■□□ 2.18
AC009041.3-201ENST00000564390 TRMT1LQ7Z2T5 733 aaKnown RBP28.64■■■□□ 2.18
AC009041.3-201ENST00000564390 TNPO1Q92973 898 aaKnown RBP28.64■■■□□ 2.18
AC009041.3-201ENST00000564390 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.63■■■□□ 2.17
AC009041.3-201ENST00000564390 ATP4AP20648 1035 aa28.63■■■□□ 2.17
AC009041.3-201ENST00000564390 ME3Q16798 604 aa28.63■■■□□ 2.17
AC009041.3-201ENST00000564390 CKAP2LQ8IYA6 745 aa28.63■■■□□ 2.17
AC009041.3-201ENST00000564390 SMAP1Q8IYB5 467 aaPredicted RBP28.63■■■□□ 2.17
AC009041.3-201ENST00000564390 MICALL1Q8N3F8 863 aa28.63■■■□□ 2.17
AC009041.3-201ENST00000564390 RAD9AQ99638 391 aa28.63■■■□□ 2.17
AC009041.3-201ENST00000564390 PHF20Q9BVI0 1012 aa28.63■■■□□ 2.17
AC009041.3-201ENST00000564390 C22orf23Q9BZE7 217 aa28.63■■■□□ 2.17
AC009041.3-201ENST00000564390 SAMM50Q9Y512 469 aa28.63■■■□□ 2.17
AC009041.3-201ENST00000564390 PCDHA2Q9Y5H9 948 aa28.63■■■□□ 2.17
AC009041.3-201ENST00000564390 CHMP2AO43633 222 aa28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 HBP1O60381 514 aa28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 PSAPP07602 524 aa28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 NEK4P51957 841 aa28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 FBXO47Q5MNV8 452 aa28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 GALNT17Q6IS24 598 aa28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 MTHFD1LQ6UB35 978 aa28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 APBB2Q92870 758 aa28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 PRDM6Q9NQX0 595 aa28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 ORC3Q9UBD5 711 aaPredicted RBP28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 GABBR1Q9UBS5 961 aa28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 MTUS1Q9ULD2 1270 aa28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 MYO9BQ13459 2157 aa28.62■■■□□ 2.17
AC009041.3-201ENST00000564390 GAS7O60861 476 aa28.61■■■□□ 2.17
AC009041.3-201ENST00000564390 UPP2O95045 317 aa28.61■■■□□ 2.17
AC009041.3-201ENST00000564390 NONOQ15233 471 aaKnown RBP eCLIP28.61■■■□□ 2.17
AC009041.3-201ENST00000564390 INF2Q27J81 1249 aa28.61■■■□□ 2.17
AC009041.3-201ENST00000564390 FAM177A1Q8N128 213 aaPredicted RBP28.61■■■□□ 2.17
AC009041.3-201ENST00000564390 SLC5A5Q92911 643 aa28.61■■■□□ 2.17
AC009041.3-201ENST00000564390 PCDHA10Q9Y5I2 948 aa28.61■■■□□ 2.17
AC009041.3-201ENST00000564390 WDR64B1ANS9 1081 aa28.6■■■□□ 2.17
AC009041.3-201ENST00000564390 ZBTB42B2RXF5 422 aa28.6■■■□□ 2.17
AC009041.3-201ENST00000564390 EIF5BO60841 1220 aaKnown RBP28.6■■■□□ 2.17
AC009041.3-201ENST00000564390 KLRC1P26715 233 aa28.6■■■□□ 2.17
AC009041.3-201ENST00000564390 LRCH2Q5VUJ6 765 aa28.6■■■□□ 2.17
AC009041.3-201ENST00000564390 KRT25Q7Z3Z0 450 aa28.6■■■□□ 2.17
AC009041.3-201ENST00000564390 GTF3C6Q969F1 213 aa28.6■■■□□ 2.17
AC009041.3-201ENST00000564390 UNC45AQ9H3U1 944 aa28.6■■■□□ 2.17
AC009041.3-201ENST00000564390 MAFBQ9Y5Q3 323 aaPredicted RBP28.6■■■□□ 2.17
AC009041.3-201ENST00000564390 TRPV2Q9Y5S1 764 aa28.6■■■□□ 2.17
AC009041.3-201ENST00000564390 IGSF9BQ9UPX0 1349 aa28.6■■■□□ 2.17
AC009041.3-201ENST00000564390 COL1A2P08123 1366 aa28.6■■■□□ 2.17
AC009041.3-201ENST00000564390 LINC01553A4QN01 128 aa28.59■■■□□ 2.17
AC009041.3-201ENST00000564390 Q4G0T1 1027 aa28.59■■■□□ 2.17
AC009041.3-201ENST00000564390 KRT40Q6A162 431 aa28.59■■■□□ 2.17
AC009041.3-201ENST00000564390 TSHZ1Q6ZSZ6 1077 aa28.59■■■□□ 2.17
AC009041.3-201ENST00000564390 OXER1Q8TDS5 423 aa28.59■■■□□ 2.17
AC009041.3-201ENST00000564390 TEKT3Q9BXF9 490 aa28.59■■■□□ 2.17
AC009041.3-201ENST00000564390 AGO3Q9H9G7 860 aaKnown RBP28.59■■■□□ 2.17
AC009041.3-201ENST00000564390 WDR81Q562E7 1941 aa28.59■■■□□ 2.17
AC009041.3-201ENST00000564390 MYH9P35579 1960 aaKnown RBP28.59■■■□□ 2.17
AC009041.3-201ENST00000564390 SMIM35A0A1B0GVV1 85 aa28.58■■■□□ 2.17
AC009041.3-201ENST00000564390 M0QZ92 97 aa28.58■■■□□ 2.17
AC009041.3-201ENST00000564390 DLL1O00548 723 aa28.58■■■□□ 2.17
AC009041.3-201ENST00000564390 CD52P31358 61 aa28.58■■■□□ 2.17
AC009041.3-201ENST00000564390 UGCGQ16739 394 aa28.58■■■□□ 2.17
AC009041.3-201ENST00000564390 IER5Q5VY09 327 aa28.58■■■□□ 2.17
AC009041.3-201ENST00000564390 GDPD5Q8WTR4 605 aa28.58■■■□□ 2.17
AC009041.3-201ENST00000564390 RIT2Q99578 217 aa28.58■■■□□ 2.17
AC009041.3-201ENST00000564390 DISC1Q9NRI5 854 aa28.58■■■□□ 2.17
AC009041.3-201ENST00000564390 INSL6Q9Y581 213 aa28.58■■■□□ 2.17
AC009041.3-201ENST00000564390 TRANK1O15050 2925 aa28.57■■■□□ 2.16
AC009041.3-201ENST00000564390 CYP3A7-CYP3A51PA0A087WV96 503 aa28.57■■■□□ 2.16
AC009041.3-201ENST00000564390 CCDC194A0A1B0GVG4 234 aa28.57■■■□□ 2.16
AC009041.3-201ENST00000564390 RPLP2P05387 115 aaKnown RBP28.57■■■□□ 2.16
AC009041.3-201ENST00000564390 FDPSP14324 419 aaKnown RBP28.57■■■□□ 2.16
AC009041.3-201ENST00000564390 XBP1P17861 261 aa28.57■■■□□ 2.16
AC009041.3-201ENST00000564390 CYP3A7P24462 503 aa28.57■■■□□ 2.16
AC009041.3-201ENST00000564390 LETM2Q2VYF4 491 aa28.57■■■□□ 2.16
AC009041.3-201ENST00000564390 ZNF484Q5JVG2 852 aa28.57■■■□□ 2.16
AC009041.3-201ENST00000564390 BBXQ8WY36 941 aaPredicted RBP28.57■■■□□ 2.16
AC009041.3-201ENST00000564390 TOP1MTQ969P6 601 aa28.57■■■□□ 2.16
AC009041.3-201ENST00000564390 LOXHD1Q8IVV2 1947 aa28.57■■■□□ 2.16
AC009041.3-201ENST00000564390 A0A0C4DFX4 3053 aa28.56■■■□□ 2.16
AC009041.3-201ENST00000564390 SLC37A4O43826 429 aa28.56■■■□□ 2.16
AC009041.3-201ENST00000564390 ZNF862O60290 1169 aa28.56■■■□□ 2.16
AC009041.3-201ENST00000564390 C22orf31O95567 290 aa28.56■■■□□ 2.16
AC009041.3-201ENST00000564390 FOSBP53539 338 aa28.56■■■□□ 2.16
AC009041.3-201ENST00000564390 HTRA4P83105 476 aaPredicted RBP28.56■■■□□ 2.16
AC009041.3-201ENST00000564390 GRB10Q13322 594 aa28.56■■■□□ 2.16
AC009041.3-201ENST00000564390 NSUN7Q8NE18 718 aaKnown RBP28.56■■■□□ 2.16
AC009041.3-201ENST00000564390 MBOAT7Q96N66 472 aa28.56■■■□□ 2.16
AC009041.3-201ENST00000564390 PPP1R16BQ96T49 567 aa28.56■■■□□ 2.16
AC009041.3-201ENST00000564390 YME1L1Q96TA2 773 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms