RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 TUBE1Q9UJT0 475 aa19.5■□□□□ 0.71
USB1-209ENST00000564387 SAMM50Q9Y512 469 aa19.5■□□□□ 0.71
USB1-209ENST00000564387 CHMP2AO43633 222 aa19.49■□□□□ 0.71
USB1-209ENST00000564387 PFKMP08237 780 aa19.49■□□□□ 0.71
USB1-209ENST00000564387 CALCRLQ16602 461 aa19.49■□□□□ 0.71
USB1-209ENST00000564387 UGCGQ16739 394 aa19.49■□□□□ 0.71
USB1-209ENST00000564387 ZNF484Q5JVG2 852 aa19.49■□□□□ 0.71
USB1-209ENST00000564387 FAM26DQ5JW98 314 aa19.49■□□□□ 0.71
USB1-209ENST00000564387 ZNF618Q5T7W0 954 aa19.49■□□□□ 0.71
USB1-209ENST00000564387 LRRC8DQ7L1W4 858 aa19.49■□□□□ 0.71
USB1-209ENST00000564387 RPUSD2Q8IZ73 545 aaKnown RBP19.49■□□□□ 0.71
USB1-209ENST00000564387 C4orf32Q8N8J7 132 aa19.49■□□□□ 0.71
USB1-209ENST00000564387 FAM167AQ96KS9 214 aa19.49■□□□□ 0.71
USB1-209ENST00000564387 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.49■□□□□ 0.71
USB1-209ENST00000564387 TMEM60Q9H2L4 133 aa19.49■□□□□ 0.71
USB1-209ENST00000564387 TRPC6Q9Y210 931 aa19.49■□□□□ 0.71
USB1-209ENST00000564387 CXCL10P02778 98 aa19.48■□□□□ 0.71
USB1-209ENST00000564387 RPLP2P05387 115 aaKnown RBP19.48■□□□□ 0.71
USB1-209ENST00000564387 GNL2Q13823 731 aaKnown RBP19.48■□□□□ 0.71
USB1-209ENST00000564387 MBTPS1Q14703 1052 aa19.48■□□□□ 0.71
USB1-209ENST00000564387 EPHA7Q15375 998 aa19.48■□□□□ 0.71
USB1-209ENST00000564387 TTC38Q5R3I4 469 aa19.48■□□□□ 0.71
USB1-209ENST00000564387 RUFY4Q6ZNE9 571 aa19.48■□□□□ 0.71
USB1-209ENST00000564387 NOL7Q9UMY1 257 aaKnown RBP19.48■□□□□ 0.71
USB1-209ENST00000564387 PCDHA12Q9UN75 941 aa19.48■□□□□ 0.71
USB1-209ENST00000564387 PCDHA2Q9Y5H9 948 aa19.48■□□□□ 0.71
USB1-209ENST00000564387 H3BQV1 296 aa19.47■□□□□ 0.71
USB1-209ENST00000564387 OATP04181 439 aa19.47■□□□□ 0.71
USB1-209ENST00000564387 PDCP20941 246 aa19.47■□□□□ 0.71
USB1-209ENST00000564387 MCM7P33993 719 aa19.47■□□□□ 0.71
USB1-209ENST00000564387 TARBP2Q15633 366 aaKnown RBP19.47■□□□□ 0.71
USB1-209ENST00000564387 PSRC1Q6PGN9 363 aaPredicted RBP19.47■□□□□ 0.71
USB1-209ENST00000564387 MTHFD1LQ6UB35 978 aa19.47■□□□□ 0.71
USB1-209ENST00000564387 ZNF365Q70YC5 407 aa19.47■□□□□ 0.71
USB1-209ENST00000564387 HERVK_113Q902F9 699 aa19.47■□□□□ 0.71
USB1-209ENST00000564387 NIFKQ9BYG3 293 aaKnown RBP19.47■□□□□ 0.71
USB1-209ENST00000564387 TTC12Q9H892 705 aaPredicted RBP19.47■□□□□ 0.71
USB1-209ENST00000564387 SCN5AQ14524 2016 aa19.47■□□□□ 0.71
USB1-209ENST00000564387 SMIM35A0A1B0GVV1 85 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 NBNO60934 754 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 P4HBP07237 508 aaKnown RBP19.46■□□□□ 0.71
USB1-209ENST00000564387 ACRP10323 421 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 THPOP40225 353 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 PSMC5P62195 406 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 PRKCEQ02156 737 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 ZNF174Q15697 407 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 RILPL1Q5EBL4 403 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 TRAPPC12Q8WVT3 735 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 CEP89Q96ST8 783 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 HSD17B14Q9BPX1 270 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 NRBP2Q9NSY0 501 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 CEP131Q9UPN4 1083 aa19.46■□□□□ 0.71
USB1-209ENST00000564387 RSPH10B2B2RC85 870 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 MARCH6O60337 910 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 C22orf31O95567 290 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 FGBP02675 491 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 RSPH10BP0C881 870 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 ATP2B1P20020 1258 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 KLRC1P26715 233 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 TXKP42681 527 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 QARSP47897 775 aaKnown RBP19.45■□□□□ 0.7
USB1-209ENST00000564387 IGBP1P78318 339 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 MGAT3Q09327 533 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 XKR3Q5GH77 459 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 CKAP2LQ8IYA6 745 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.45■□□□□ 0.7
USB1-209ENST00000564387 PCDHB6Q9Y5E3 794 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 TET1Q8NFU7 2136 aa19.45■□□□□ 0.7
USB1-209ENST00000564387 CHRNA1P02708 482 aa19.44■□□□□ 0.7
USB1-209ENST00000564387 OR52Z1P0C646 297 aa19.44■□□□□ 0.7
USB1-209ENST00000564387 SYT1P21579 422 aa19.44■□□□□ 0.7
USB1-209ENST00000564387 FXR1P51114 621 aaKnown RBP eCLIP19.44■□□□□ 0.7
USB1-209ENST00000564387 NBR1Q14596 966 aa19.44■□□□□ 0.7
USB1-209ENST00000564387 MCTP1Q6DN14 999 aa19.44■□□□□ 0.7
USB1-209ENST00000564387 HSCBQ8IWL3 235 aa19.44■□□□□ 0.7
USB1-209ENST00000564387 C4orf19Q8IY42 314 aa19.44■□□□□ 0.7
USB1-209ENST00000564387 NME8Q8N427 588 aa19.44■□□□□ 0.7
USB1-209ENST00000564387 LINC01465Q8N7H1 131 aa19.44■□□□□ 0.7
USB1-209ENST00000564387 BANK1Q8NDB2 785 aa19.44■□□□□ 0.7
USB1-209ENST00000564387 ZBTB10Q96DT7 871 aa19.44■□□□□ 0.7
USB1-209ENST00000564387 WRAP73Q9P2S5 460 aaPredicted RBP19.44■□□□□ 0.7
USB1-209ENST00000564387 LAD1O00515 517 aa19.43■□□□□ 0.7
USB1-209ENST00000564387 MAGEB2O15479 319 aa19.43■□□□□ 0.7
USB1-209ENST00000564387 DKC1O60832 514 aaKnown RBP eCLIP19.43■□□□□ 0.71e-5■■■■□ 25.7
USB1-209ENST00000564387 SLITRK3O94933 977 aa19.43■□□□□ 0.7
USB1-209ENST00000564387 LYPLA2O95372 231 aa19.43■□□□□ 0.7
USB1-209ENST00000564387 ANO5Q75V66 913 aa19.43■□□□□ 0.7
USB1-209ENST00000564387 BRAPQ7Z569 592 aa19.43■□□□□ 0.7
USB1-209ENST00000564387 RSPH3Q86UC2 560 aa19.43■□□□□ 0.7
USB1-209ENST00000564387 KIAA0319LQ8IZA0 1049 aa19.43■□□□□ 0.7
USB1-209ENST00000564387 NEK9Q8TD19 979 aa19.43■□□□□ 0.7
USB1-209ENST00000564387 DNAJB3Q8WWF6 145 aa19.43■□□□□ 0.7
USB1-209ENST00000564387 PRPHP41219 470 aa19.42■□□□□ 0.7
USB1-209ENST00000564387 FXR2P51116 673 aaKnown RBP eCLIP19.42■□□□□ 0.7
USB1-209ENST00000564387 PTGDRQ13258 359 aa19.42■□□□□ 0.7
USB1-209ENST00000564387 MKRN4PQ13434 485 aaPredicted RBP19.42■□□□□ 0.7
USB1-209ENST00000564387 PLEKHG4Q58EX7 1191 aa19.42■□□□□ 0.7
USB1-209ENST00000564387 NCAPH2Q6IBW4 605 aa19.42■□□□□ 0.7
USB1-209ENST00000564387 DEFB128Q7Z7B8 93 aa19.42■□□□□ 0.7
USB1-209ENST00000564387 RNPC3Q96LT9 517 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms