RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 ATP8B4Q8TF62 1192 aa22.63■■□□□ 1.21
SHCBP1-203ENST00000564272 PPM1EQ8WY54 764 aa22.63■■□□□ 1.21
SHCBP1-203ENST00000564272 ARNTL2Q8WYA1 636 aa22.63■■□□□ 1.21
SHCBP1-203ENST00000564272 GJB4Q9NTQ9 266 aa22.63■■□□□ 1.21
SHCBP1-203ENST00000564272 TCEAL9Q9UHQ7 104 aa22.63■■□□□ 1.21
SHCBP1-203ENST00000564272 TDP2O95551 362 aa22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 ATP4AP20648 1035 aa22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 MRPS6P82932 125 aaKnown RBP22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 LPIN1Q14693 890 aa22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 MTHFD1LQ6UB35 978 aa22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 FAM177A1Q8N128 213 aaPredicted RBP22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 TNPO1Q92973 898 aaKnown RBP22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 GJA10Q969M2 543 aa22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 RAD9AQ99638 391 aa22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 PHF20Q9BVI0 1012 aa22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 C22orf23Q9BZE7 217 aa22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 PCDHA2Q9Y5H9 948 aa22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 COL4A4P53420 1690 aaPredicted RBP22.62■■□□□ 1.21
SHCBP1-203ENST00000564272 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.61■■□□□ 1.21
SHCBP1-203ENST00000564272 HBP1O60381 514 aa22.61■■□□□ 1.21
SHCBP1-203ENST00000564272 EIF5BO60841 1220 aaKnown RBP22.61■■□□□ 1.21
SHCBP1-203ENST00000564272 NEK4P51957 841 aa22.61■■□□□ 1.21
SHCBP1-203ENST00000564272 TMEM62Q0P6H9 643 aa22.61■■□□□ 1.21
SHCBP1-203ENST00000564272 ME3Q16798 604 aa22.61■■□□□ 1.21
SHCBP1-203ENST00000564272 GALNT17Q6IS24 598 aa22.61■■□□□ 1.21
SHCBP1-203ENST00000564272 SMAP1Q8IYB5 467 aaPredicted RBP22.61■■□□□ 1.21
SHCBP1-203ENST00000564272 APBB2Q92870 758 aa22.61■■□□□ 1.21
SHCBP1-203ENST00000564272 ORC3Q9UBD5 711 aaPredicted RBP22.61■■□□□ 1.21
SHCBP1-203ENST00000564272 PCDHA10Q9Y5I2 948 aa22.61■■□□□ 1.21
SHCBP1-203ENST00000564272 MYH9P35579 1960 aaKnown RBP22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 CHMP2AO43633 222 aa22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 PSAPP07602 524 aa22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 NONOQ15233 471 aaKnown RBP eCLIP22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 CCDC85BQ15834 202 aaPredicted RBP22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 INF2Q27J81 1249 aa22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 FBXO47Q5MNV8 452 aa22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 CKAP2LQ8IYA6 745 aa22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 SLC5A5Q92911 643 aa22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 GTF3C6Q969F1 213 aa22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 GABBR1Q9UBS5 961 aa22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 SAMM50Q9Y512 469 aa22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 MAFBQ9Y5Q3 323 aaPredicted RBP22.6■■□□□ 1.21
SHCBP1-203ENST00000564272 IGSF9BQ9UPX0 1349 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 WDR81Q562E7 1941 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 WDR64B1ANS9 1081 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 ZBTB42B2RXF5 422 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 GAS7O60861 476 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 KLRC1P26715 233 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 Q4G0T1 1027 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 LRCH2Q5VUJ6 765 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 TRMT1LQ7Z2T5 733 aaKnown RBP22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 KRT25Q7Z3Z0 450 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 MICALL1Q8N3F8 863 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 RIT2Q99578 217 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 PRDM6Q9NQX0 595 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 TRPV2Q9Y5S1 764 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 PRUNE2Q8WUY3 3088 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 COL1A2P08123 1366 aa22.59■■□□□ 1.21
SHCBP1-203ENST00000564272 UNC80Q8N2C7 3258 aa22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 SMIM35A0A1B0GVV1 85 aa22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 LINC01553A4QN01 128 aa22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 RPLP2P05387 115 aaKnown RBP22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 XBP1P17861 261 aa22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 IER5Q5VY09 327 aa22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 TSHZ1Q6ZSZ6 1077 aa22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 OXER1Q8TDS5 423 aa22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 TEKT3Q9BXF9 490 aa22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 UNC45AQ9H3U1 944 aa22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 AGO3Q9H9G7 860 aaKnown RBP22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 DISC1Q9NRI5 854 aa22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 MTUS1Q9ULD2 1270 aa22.58■■□□□ 1.21
SHCBP1-203ENST00000564272 CYP3A7-CYP3A51PA0A087WV96 503 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 CCDC194A0A1B0GVG4 234 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 M0QZ92 97 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 UPP2O95045 317 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 FDPSP14324 419 aaKnown RBP22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 CYP3A7P24462 503 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 CD52P31358 61 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 HTRA4P83105 476 aaPredicted RBP22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 UGCGQ16739 394 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 ZNF484Q5JVG2 852 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 KRT40Q6A162 431 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 NSUN7Q8NE18 718 aaKnown RBP22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 BBXQ8WY36 941 aaPredicted RBP22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 TOP1MTQ969P6 601 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 MBOAT7Q96N66 472 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 INSL6Q9Y581 213 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 LOXHD1Q8IVV2 1947 aa22.57■■□□□ 1.2
SHCBP1-203ENST00000564272 DLL1O00548 723 aa22.56■■□□□ 1.2
SHCBP1-203ENST00000564272 SLC37A4O43826 429 aa22.56■■□□□ 1.2
SHCBP1-203ENST00000564272 PSMD10O75832 226 aa22.56■■□□□ 1.2
SHCBP1-203ENST00000564272 C22orf31O95567 290 aa22.56■■□□□ 1.2
SHCBP1-203ENST00000564272 ST3GAL1Q11201 340 aa22.56■■□□□ 1.2
SHCBP1-203ENST00000564272 LETM2Q2VYF4 491 aa22.56■■□□□ 1.2
SHCBP1-203ENST00000564272 C8orf34Q49A92 452 aa22.56■■□□□ 1.2
SHCBP1-203ENST00000564272 MOXD1Q6UVY6 613 aa22.56■■□□□ 1.2
SHCBP1-203ENST00000564272 ETNPPLQ8TBG4 499 aa22.56■■□□□ 1.2
SHCBP1-203ENST00000564272 GDPD5Q8WTR4 605 aa22.56■■□□□ 1.2
SHCBP1-203ENST00000564272 WASF1Q92558 559 aa22.56■■□□□ 1.2
SHCBP1-203ENST00000564272 CELF4Q9BZC1 486 aaKnown RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms