RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 C5AR1P21730 350 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 HERVK_113P62684 666 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 BNIP3Q12983 259 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 TUSC3Q13454 348 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 PLA2G4EQ3MJ16 856 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 PPP4R4Q6NUP7 873 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 SLC4A10Q6U841 1118 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 CEP128Q6ZU80 1094 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 RTN4RL1Q86UN2 441 aaPredicted RBP3.34□□□□□ -1.87
CHD9-209ENST00000564255 FAM43AQ8N2R8 423 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 PDZD8Q8NEN9 1154 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 PJA1Q8NG27 643 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 CLEC4DQ8WXI8 215 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 ZNF496Q96IT1 587 aaPredicted RBP3.34□□□□□ -1.87
CHD9-209ENST00000564255 SPOCK3Q9BQ16 436 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 PLCD4Q9BRC7 762 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 WNT8AQ9H1J5 351 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 SEMA4AQ9H3S1 761 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 C1orf112Q9NSG2 853 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 BSDC1Q9NW68 430 aaPredicted RBP3.34□□□□□ -1.87
CHD9-209ENST00000564255 DDX20Q9UHI6 824 aaKnown RBP3.34□□□□□ -1.87
CHD9-209ENST00000564255 MSRAQ9UJ68 235 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 TMEM59LQ9UK28 342 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 PTPN22Q9Y2R2 807 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 ACOT7O00154 380 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 ELL2O00472 640 aaPredicted RBP3.34□□□□□ -1.87
CHD9-209ENST00000564255 SGSM2O43147 1006 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 XPOTO43592 962 aaKnown RBP3.34□□□□□ -1.87
CHD9-209ENST00000564255 EFEMP2O95967 443 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 PTPN1P18031 435 aaKnown RBP3.34□□□□□ -1.87
CHD9-209ENST00000564255 FUT4P22083 530 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 DOC2BQ14184 412 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 GRM3Q14832 879 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 TMEM132BQ14DG7 1078 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 LONRF3Q496Y0 759 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 EP400NLQ6ZTU2 488 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 ESPNLQ6ZVH7 1005 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 CHST15Q7LFX5 561 aaPredicted RBP3.34□□□□□ -1.87
CHD9-209ENST00000564255 NLRX1Q86UT6 975 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 DCP2Q8IU60 420 aaKnown RBP3.34□□□□□ -1.87
CHD9-209ENST00000564255 PHYKPLQ8IUZ5 450 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 ALPK1Q96QP1 1244 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 NMRK2Q9NPI5 230 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 DNAJC28Q9NX36 388 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 SLAMF8Q9P0V8 285 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 ASB1Q9Y576 335 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 PCDHB4Q9Y5E5 795 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 TAF6LQ9Y6J9 622 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 TCRBV5S2A0A599 114 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 FITM1A5D6W6 292 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 SRGAP3O43295 1099 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 DYRK3O43781 588 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 CD8BP10966 210 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 OS9Q13438 667 aaPredicted RBP3.33□□□□□ -1.88
CHD9-209ENST00000564255 MORC3Q14149 939 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 UGT8Q16880 541 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 TOR2AQ5JU69 321 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 TTLL7Q6ZT98 887 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 KANSL1Q7Z3B3 1105 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 TRIM48Q8IWZ4 208 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 NUP43Q8NFH3 380 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 SLC35G2Q8TBE7 412 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 TIFAQ96CG3 184 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 CCDC120Q96HB5 630 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 RAX2Q96IS3 184 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 TAAR9Q96RI9 348 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 MYOTQ9UBF9 498 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 RCAN3Q9UKA8 241 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 TMPRSS11EQ9UL52 423 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 PPP2R3BQ9Y5P8 575 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 GOLGA6L22H0YM25 854 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 OFD1O75665 1012 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 HPXP02790 462 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 TMEM253P0C7T8 217 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 PNLIPP16233 465 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 PRKCAP17252 672 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 CD96P40200 585 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 HTR3AP46098 478 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 SRSF2Q01130 221 aaKnown RBP3.33□□□□□ -1.88
CHD9-209ENST00000564255 KIR3DS1Q14943 382 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 ACAP2Q15057 778 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 CT83Q5H943 113 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 ZBTB41Q5SVQ8 909 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 SLC41A1Q8IVJ1 513 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 RBM12BQ8IXT5 1001 aaKnown RBP3.33□□□□□ -1.88
CHD9-209ENST00000564255 TMEM151AQ8N4L1 468 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 ASB15Q8WXK1 588 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 HPS3Q969F9 1004 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 EAF2Q96CJ1 260 aaPredicted RBP3.33□□□□□ -1.88
CHD9-209ENST00000564255 SHISA4Q96DD7 197 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 MAML3Q96JK9 1138 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 CSRNP2Q9H175 543 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 HSPBP1Q9NZL4 362 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 USP25Q9UHP3 1055 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 KCNG1Q9UIX4 513 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 DNM3Q9UQ16 869 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 FRMPD2Q68DX3 1309 aaPredicted RBP3.33□□□□□ -1.88
CHD9-209ENST00000564255 PRSS38A1L453 326 aa3.33□□□□□ -1.88
CHD9-209ENST00000564255 TGFB1P01137 390 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms