RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 PBKQ96KB5 322 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 ISCUQ9H1K1 167 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 TMBIM4Q9HC24 238 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 AMFRQ9UKV5 643 aa12.89□□□□□ -0.35
ABCA3-203ENST00000563623 SLURP2P0DP57 97 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 USH1GQ495M9 461 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 SCFD1Q8WVM8 642 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 KLC4Q9NSK0 619 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 GCNT4Q9P109 453 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 BCS1LQ9Y276 419 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 BCORQ6W2J9 1755 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 DOCK2Q92608 1830 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 PLCG2P16885 1265 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 SSR1P43307 286 aaKnown RBP12.88□□□□□ -0.35
ABCA3-203ENST00000563623 IFNAR2P48551 515 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 PLTPP55058 493 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 C16orf86Q6ZW13 317 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 CEP89Q96ST8 783 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 VIMP08670 466 aaKnown RBP12.88□□□□□ -0.35
ABCA3-203ENST00000563623 RFC4P35249 363 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 SLCO1A2P46721 670 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 USP11P51784 963 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 PPP2R2AP63151 447 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 GTF2IP78347 998 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 ITGB3BPQ13352 177 aaPredicted RBP12.88□□□□□ -0.35
ABCA3-203ENST00000563623 CUL1Q13616 776 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.88□□□□□ -0.357e-6■■□□□ 12.2
ABCA3-203ENST00000563623 NEUROG2Q9H2A3 272 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 HAUS2Q9NVX0 235 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 NAGPAQ9UK23 515 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 DNM3Q9UQ16 869 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 PCDHGC5Q9Y5F6 944 aa12.88□□□□□ -0.35
ABCA3-203ENST00000563623 KDM3AQ9Y4C1 1321 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 SPDYE3A6NKU9 549 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 CHMP2AO43633 222 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 CTNND1O60716 968 aaKnown RBP12.87□□□□□ -0.35
ABCA3-203ENST00000563623 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
ABCA3-203ENST00000563623 TNFRSF8P28908 595 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 HSPA9P38646 679 aaKnown RBP12.87□□□□□ -0.35
ABCA3-203ENST00000563623 CASP5P51878 434 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 FAM98CQ17RN3 349 aaKnown RBP12.87□□□□□ -0.35
ABCA3-203ENST00000563623 GKAP1Q5VSY0 366 aaPredicted RBP12.87□□□□□ -0.35
ABCA3-203ENST00000563623 CACNA1SQ13698 1873 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 ABCB11O95342 1321 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 PNMA6FA0A0J9YX94 578 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 ZNF844Q08AG5 666 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 MTMR3Q13615 1198 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 ASPRV1Q53RT3 343 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 GLYCTKQ8IVS8 523 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 DYDC1Q8WWB3 177 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 CTNNBL1Q8WYA6 563 aaPredicted RBP12.87□□□□□ -0.35
ABCA3-203ENST00000563623 JMJD4Q9H9V9 463 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 BAIAP2L1Q9UHR4 511 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 SNX24Q9Y343 169 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 PCDHA1Q9Y5I3 950 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 COL4A1P02462 1669 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 MYBP10242 640 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 CYP11B2P19099 503 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 NF2P35240 595 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 STAT1P42224 750 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 CASP4P49662 377 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 SCNN1DP51172 638 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 ERMNQ8TAM6 284 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 HAS1Q92839 578 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 RTFDC1Q9BY42 306 aaPredicted RBP12.87□□□□□ -0.35
ABCA3-203ENST00000563623 SLC40A1Q9NP59 571 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 PLCB1Q9NQ66 1216 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 MTMR4Q9NYA4 1195 aa12.87□□□□□ -0.35
ABCA3-203ENST00000563623 PAPPAQ13219 1627 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 GOLGA6L10A0A0M3HER8 536 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 DCDC2CA8MYV0 355 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 PPP1R12BO60237 982 aaPredicted RBP12.86□□□□□ -0.35
ABCA3-203ENST00000563623 CYP2J2P51589 502 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
ABCA3-203ENST00000563623 QPCTQ16769 361 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 TMEM119Q4V9L6 283 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 PNMA8AQ86V59 439 aaPredicted RBP12.86□□□□□ -0.35
ABCA3-203ENST00000563623 SYN2Q92777 582 aaPredicted RBP12.86□□□□□ -0.35
ABCA3-203ENST00000563623 CD209Q9NNX6 404 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 PNMA2Q9UL42 364 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 FRMD3A2A2Y4 597 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 CALUO43852 315 aaPredicted RBP12.86□□□□□ -0.35
ABCA3-203ENST00000563623 MED24O75448 989 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 PSMC6P62333 389 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 PPP4R3AQ6IN85 833 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 TPCN2Q8NHX9 752 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 MGARPQ8TDB4 240 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 RAPGEF5Q92565 580 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 TBC1D31Q96DN5 1066 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 SEC16BQ96JE7 1060 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
ABCA3-203ENST00000563623 RSPH10B2B2RC85 870 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 LRRN2O75325 713 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 CLSTN1O94985 981 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 RSPH10BP0C881 870 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 TNFAIP3P21580 790 aa12.86□□□□□ -0.35
ABCA3-203ENST00000563623 RPL13P26373 211 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms