RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SMIM35A0A1B0GVV1 85 aa21.35■■□□□ 1.01
NME3-204ENST00000563498 hCG_1642624A0A1W2PR95 340 aa21.35■■□□□ 1.01
NME3-204ENST00000563498 LINC01565O15544 149 aa21.35■■□□□ 1.01
NME3-204ENST00000563498 EYA4O95677 639 aa21.35■■□□□ 1.01
NME3-204ENST00000563498 ITGB1P05556 798 aa21.35■■□□□ 1.01
NME3-204ENST00000563498 ACTR2P61160 394 aa21.35■■□□□ 1.01
NME3-204ENST00000563498 PAK2Q13177 524 aa21.35■■□□□ 1.01
NME3-204ENST00000563498 PLCB4Q15147 1175 aa21.35■■□□□ 1.01
NME3-204ENST00000563498 HEATR3Q7Z4Q2 680 aa21.35■■□□□ 1.01
NME3-204ENST00000563498 ALYREFQ86V81 257 aaKnown RBP21.35■■□□□ 1.01
NME3-204ENST00000563498 SGMS1Q86VZ5 419 aa21.35■■□□□ 1.01
NME3-204ENST00000563498 SPPL3Q8TCT6 385 aa21.35■■□□□ 1.01
NME3-204ENST00000563498 CELF4Q9BZC1 486 aaKnown RBP21.35■■□□□ 1.01
NME3-204ENST00000563498 KIAA1671Q9BY89 1806 aa21.34■■□□□ 1.01
NME3-204ENST00000563498 STXBP3O00186 592 aa21.34■■□□□ 1.01
NME3-204ENST00000563498 SCG2P13521 617 aa21.34■■□□□ 1.01
NME3-204ENST00000563498 DNAJB1P25685 340 aa21.34■■□□□ 1.01
NME3-204ENST00000563498 NDUFV1P49821 464 aa21.34■■□□□ 1.01
NME3-204ENST00000563498 SLC26A2P50443 739 aa21.34■■□□□ 1.01
NME3-204ENST00000563498 STAT5BP51692 787 aa21.34■■□□□ 1.01
NME3-204ENST00000563498 RNF135Q8IUD6 432 aa21.34■■□□□ 1.01
NME3-204ENST00000563498 EFHBQ8N7U6 833 aa21.34■■□□□ 1.01
NME3-204ENST00000563498 KLHL23Q8NBE8 558 aa21.34■■□□□ 1.01
NME3-204ENST00000563498 LSG1Q9H089 658 aaKnown RBP21.34■■□□□ 1.01
NME3-204ENST00000563498 SLC27A2O14975 620 aa21.33■■□□□ 1.01
NME3-204ENST00000563498 TMEM62Q0P6H9 643 aa21.33■■□□□ 1.01
NME3-204ENST00000563498 COL9A3Q14050 684 aaPredicted RBP21.33■■□□□ 1.01
NME3-204ENST00000563498 HFE2Q6ZVN8 426 aa21.33■■□□□ 1.01
NME3-204ENST00000563498 CCDC82Q8N4S0 544 aa21.33■■□□□ 1.01
NME3-204ENST00000563498 CYP2W1Q8TAV3 490 aa21.33■■□□□ 1.01
NME3-204ENST00000563498 MFSD14AQ96MC6 490 aa21.33■■□□□ 1.01
NME3-204ENST00000563498 YTHDC1Q96MU7 727 aaKnown RBP21.33■■□□□ 1.01
NME3-204ENST00000563498 MUTYHQ9UIF7 546 aa21.33■■□□□ 1.01
NME3-204ENST00000563498 ATG7O95352 703 aa21.32■■□□□ 1
NME3-204ENST00000563498 FOSP01100 380 aaPredicted RBP21.32■■□□□ 1
NME3-204ENST00000563498 KRT76Q01546 638 aa21.32■■□□□ 1
NME3-204ENST00000563498 NHLH1Q02575 133 aa21.32■■□□□ 1
NME3-204ENST00000563498 COASYQ13057 564 aa21.32■■□□□ 1
NME3-204ENST00000563498 CEP55Q53EZ4 464 aa21.32■■□□□ 1
NME3-204ENST00000563498 PPP1R18Q6NYC8 613 aa21.32■■□□□ 1
NME3-204ENST00000563498 MTHFD1LQ6UB35 978 aa21.32■■□□□ 1
NME3-204ENST00000563498 SMRP1Q8NCR6 262 aa21.32■■□□□ 1
NME3-204ENST00000563498 TRAPPC12Q8WVT3 735 aa21.32■■□□□ 1
NME3-204ENST00000563498 POF1BQ8WVV4 589 aa21.32■■□□□ 1
NME3-204ENST00000563498 FBXL18Q96ME1 805 aa21.32■■□□□ 1
NME3-204ENST00000563498 TMX1Q9H3N1 280 aa21.32■■□□□ 1
NME3-204ENST00000563498 RIC8AQ9NPQ8 531 aa21.32■■□□□ 1
NME3-204ENST00000563498 RNF216Q9NWF9 866 aaPredicted RBP21.32■■□□□ 1
NME3-204ENST00000563498 CLEC1BQ9P126 229 aa21.32■■□□□ 1
NME3-204ENST00000563498 LRFN2Q9ULH4 789 aa21.32■■□□□ 1
NME3-204ENST00000563498 C5orf42Q9H799 3197 aa21.32■■□□□ 1
NME3-204ENST00000563498 IGKV6D-21A0A0A0MT36 114 aa21.31■■□□□ 1
NME3-204ENST00000563498 CSPG5O95196 566 aa21.31■■□□□ 1
NME3-204ENST00000563498 ITGB3BPQ13352 177 aaPredicted RBP21.31■■□□□ 1
NME3-204ENST00000563498 NECTIN1Q15223 517 aa21.31■■□□□ 1
NME3-204ENST00000563498 PAN2Q504Q3 1202 aaKnown RBP21.31■■□□□ 1
NME3-204ENST00000563498 WWC2Q6AWC2 1192 aa21.31■■□□□ 1
NME3-204ENST00000563498 ADGRD2Q7Z7M1 963 aa21.31■■□□□ 1
NME3-204ENST00000563498 MICU3Q86XE3 530 aa21.31■■□□□ 1
NME3-204ENST00000563498 RAB11FIP4Q86YS3 637 aa21.31■■□□□ 1
NME3-204ENST00000563498 EDAQ92838 391 aa21.31■■□□□ 1
NME3-204ENST00000563498 AGO4Q9HCK5 861 aaKnown RBP21.31■■□□□ 1
NME3-204ENST00000563498 MEIS1O00470 390 aa21.3■■□□□ 1
NME3-204ENST00000563498 ARP10275 920 aa21.3■■□□□ 1
NME3-204ENST00000563498 SARSP49591 514 aaKnown RBP21.3■■□□□ 1
NME3-204ENST00000563498 MRE11P49959 708 aa21.3■■□□□ 1
NME3-204ENST00000563498 UBE3AQ05086 875 aa21.3■■□□□ 1
NME3-204ENST00000563498 CREB3L3Q68CJ9 461 aa21.3■■□□□ 1
NME3-204ENST00000563498 SYNE3Q6ZMZ3 975 aa21.3■■□□□ 1
NME3-204ENST00000563498 RBM28Q9NW13 759 aaKnown RBP21.3■■□□□ 1
NME3-204ENST00000563498 ZNF318Q5VUA4 2279 aa21.3■■□□□ 1
NME3-204ENST00000563498 CNTNAP5Q8WYK1 1306 aa21.29■■□□□ 1
NME3-204ENST00000563498 LOXHD1Q8IVV2 1947 aa21.29■■□□□ 1
NME3-204ENST00000563498 COL1A2P08123 1366 aa21.29■■□□□ 1
NME3-204ENST00000563498 hCG_1984214I3L0E3 225 aa21.29■■□□□ 1
NME3-204ENST00000563498 NRIP1P48552 1158 aa21.29■■□□□ 1
NME3-204ENST00000563498 NAPAP54920 295 aa21.29■■□□□ 1
NME3-204ENST00000563498 ODR4Q5SWX8 454 aa21.29■■□□□ 1
NME3-204ENST00000563498 TYW1BQ6NUM6 668 aa21.29■■□□□ 1
NME3-204ENST00000563498 NIPA1Q7RTP0 329 aa21.29■■□□□ 1
NME3-204ENST00000563498 BMP8AQ7Z5Y6 402 aa21.29■■□□□ 1
NME3-204ENST00000563498 ZNF713Q8N859 430 aaPredicted RBP21.29■■□□□ 1
NME3-204ENST00000563498 LRRC2Q9BYS8 371 aa21.29■■□□□ 1
NME3-204ENST00000563498 ANO3Q9BYT9 981 aa21.29■■□□□ 1
NME3-204ENST00000563498 GLT8D2Q9H1C3 349 aa21.29■■□□□ 1
NME3-204ENST00000563498 ERVK-5Q9HDB9 667 aa21.29■■□□□ 1
NME3-204ENST00000563498 AAASQ9NRG9 546 aa21.29■■□□□ 1
NME3-204ENST00000563498 C1orf112Q9NSG2 853 aa21.29■■□□□ 1
NME3-204ENST00000563498 PCDHB7Q9Y5E2 793 aa21.29■■□□□ 1
NME3-204ENST00000563498 FSD2A1L4K1 749 aa21.28■■□□□ 1
NME3-204ENST00000563498 LOC730098B7Z3J9 87 aa21.28■■□□□ 1
NME3-204ENST00000563498 HBP1O60381 514 aa21.28■■□□□ 1
NME3-204ENST00000563498 KLRC1P26715 233 aa21.28■■□□□ 1
NME3-204ENST00000563498 SREBF1P36956 1147 aa21.28■■□□□ 1
NME3-204ENST00000563498 GATMP50440 423 aa21.28■■□□□ 1
NME3-204ENST00000563498 ADCY7P51828 1080 aa21.28■■□□□ 1
NME3-204ENST00000563498 NFX1Q12986 1120 aaKnown RBP21.28■■□□□ 1
NME3-204ENST00000563498 AP3B2Q13367 1082 aa21.28■■□□□ 1
NME3-204ENST00000563498 TMEM266Q2M3C6 531 aa21.28■■□□□ 1
NME3-204ENST00000563498 FAM160B1Q5W0V3 765 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms