RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 SCDO00767 359 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 TNFRSF1AP19438 455 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 POLD1P28340 1107 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 IL13RA1P78552 427 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 USP10Q14694 798 aaKnown RBP5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 WDR72Q3MJ13 1102 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 SOGA3Q5TF21 947 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 ZNF585AQ6P3V2 769 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 DPP8Q6V1X1 898 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 BRAPQ7Z569 592 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 FGD2Q7Z6J4 655 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 IFNL2Q8IZJ0 200 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 LILRB2Q8N423 598 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 ZSWIM2Q8NEG5 633 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 THAP3Q8WTV1 239 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 MAGEB10Q96LZ2 347 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 GNRHR2Q96P88 292 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 LRRC37BQ96QE4 947 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 DNAJC2Q99543 621 aaKnown RBP5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 CELF4Q9BZC1 486 aaKnown RBP5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 KLC2Q9H0B6 622 aa5.12□□□□□ -1.59
HMGB1P33-201ENST00000563485 CUTAO60888 179 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 MPIG6BO95866 241 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 MMEP08473 750 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 KCNA6P17658 529 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 ADCY8P40145 1251 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 RRADP55042 308 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 HERVK_113P62684 666 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 C2orf27AQ580R0 203 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 ABHD17CQ6PCB6 329 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 OVCH1Q7RTY7 1134 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 WWC2-AS2Q96NR7 200 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 LMF1Q96S06 567 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 AMNQ9BXJ7 453 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 CARD11Q9BXL7 1154 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 MRPL4Q9BYD3 311 aaKnown RBP5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 SEC61A2Q9H9S3 476 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 TSC22D4Q9Y3Q8 395 aa5.11□□□□□ -1.59
HMGB1P33-201ENST00000563485 TCRBV16S1A1N1A0A5B0 115 aa5.1□□□□□ -1.59
HMGB1P33-201ENST00000563485 ZNF623O75123 536 aa5.1□□□□□ -1.59
HMGB1P33-201ENST00000563485 LRSAM1Q6UWE0 723 aa5.1□□□□□ -1.59
HMGB1P33-201ENST00000563485 SPRED1Q7Z699 444 aa5.1□□□□□ -1.59
HMGB1P33-201ENST00000563485 PALM2Q8IXS6 379 aa5.1□□□□□ -1.59
HMGB1P33-201ENST00000563485 SH3RF3Q8TEJ3 882 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P33-201ENST00000563485 OSBPL2Q9H1P3 480 aa5.1□□□□□ -1.59
HMGB1P33-201ENST00000563485 DEF6Q9H4E7 631 aa5.1□□□□□ -1.59
HMGB1P33-201ENST00000563485 NCOA5Q9HCD5 579 aaKnown RBP5.1□□□□□ -1.59
HMGB1P33-201ENST00000563485 TRIM39Q9HCM9 518 aa5.1□□□□□ -1.59
HMGB1P33-201ENST00000563485 UCKL1Q9NWZ5 548 aa5.1□□□□□ -1.59
HMGB1P33-201ENST00000563485 GALNT8Q9NY28 637 aa5.1□□□□□ -1.59
HMGB1P33-201ENST00000563485 RASSF10A6NK89 507 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 KCNQ2O43526 872 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 FOXS1O43638 330 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 APPP05067 770 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 ETV4P43268 484 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 KCNQ1P51787 676 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 NOLC1Q14978 699 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 STILQ15468 1287 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 RNF151Q2KHN1 245 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 ZNF568Q3ZCX4 644 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 TCTN3Q6NUS6 607 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 IGSF22Q8N9C0 903 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 Q8TCH9 128 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 ASB15Q8WXK1 588 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 NEIL1Q96FI4 390 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 WNK4Q96J92 1243 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 ZDHHC5Q9C0B5 715 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 TMPRSS5Q9H3S3 457 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 KCNH7Q9NS40 1196 aa5.09□□□□□ -1.59
HMGB1P33-201ENST00000563485 CCDC163A0A0D9SF12 145 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 SLC12A8A0AV02 714 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 FOXP2O15409 715 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 RAPGEF3O95398 923 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 HMGCRP04035 888 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 ECE1P42892 770 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 SELENOPP49908 381 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 ZXDAP98168 799 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 CD83Q01151 205 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 BMS1Q14692 1282 aaKnown RBP5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 R3HDM1Q15032 1099 aaKnown RBP5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 TMEM177Q53S58 311 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 KANK2Q63ZY3 851 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 LARP4Q71RC2 724 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 CXXC5Q7LFL8 322 aaKnown RBP5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 TAX1BP1Q86VP1 789 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 GIMAP8Q8ND71 665 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 SREK1Q8WXA9 508 aaKnown RBP5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 DLG3Q92796 817 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 GBP4Q96PP9 640 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 BTBD2Q9BX70 525 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 KIAA1683Q9H0B3 1180 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 CDC42EP3Q9UKI2 254 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 CDK11AQ9UQ88 783 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 TCAF1Q9Y4C2 921 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 B3GALT1Q9Y5Z6 326 aa5.08□□□□□ -1.6
HMGB1P33-201ENST00000563485 PRAMEF22A3QJZ6 481 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 RAC3P60763 192 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 IRF9Q00978 393 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 TMEM132BQ14DG7 1078 aa5.07□□□□□ -1.6
HMGB1P33-201ENST00000563485 TBR1Q16650 682 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms