RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 SMPD1P17405 629 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 ATP4AP20648 1035 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 TCF7P36402 384 aaPredicted RBP11.33□□□□□ -0.6
SMG1-208ENST00000563448 ASIC1P78348 528 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 IRF5Q13568 498 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 KCNB1Q14721 858 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 CCDC144BQ3MJ40 725 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 DUSP28Q4G0W2 176 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 IQSEC1Q6DN90 963 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 RINT1Q6NUQ1 792 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 SEPT1Q8WYJ6 367 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 RUSC1Q9BVN2 902 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 ZNF302Q9NR11 478 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 SAGE1Q9NXZ1 904 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 DBR1Q9UK59 544 aaKnown RBP11.33□□□□□ -0.6
SMG1-208ENST00000563448 MAFBQ9Y5Q3 323 aaPredicted RBP11.33□□□□□ -0.6
SMG1-208ENST00000563448 TMEM150BA6NC51 233 aa11.32□□□□□ -0.6
SMG1-208ENST00000563448 BACH1O14867 736 aa11.32□□□□□ -0.6
SMG1-208ENST00000563448 RHOBTB3O94955 611 aa11.32□□□□□ -0.6
SMG1-208ENST00000563448 GH1P01241 217 aa11.32□□□□□ -0.6
SMG1-208ENST00000563448 XRCC6P12956 609 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMG1-208ENST00000563448 YWHABP31946 246 aaKnown RBP11.32□□□□□ -0.6
SMG1-208ENST00000563448 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
SMG1-208ENST00000563448 UNC13DQ70J99 1090 aa11.32□□□□□ -0.6
SMG1-208ENST00000563448 RNF214Q8ND24 703 aa11.32□□□□□ -0.6
SMG1-208ENST00000563448 TRIB2Q92519 343 aa11.32□□□□□ -0.6
SMG1-208ENST00000563448 ATP6V0A1Q93050 837 aa11.32□□□□□ -0.6
SMG1-208ENST00000563448 SPATA33Q96N06 139 aa11.32□□□□□ -0.6
SMG1-208ENST00000563448 PVALEFA0A1B0GWK0 134 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 DKC1O60832 514 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMG1-208ENST00000563448 LGR5O75473 907 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 RARRES1P49788 294 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 C1QTNF8P60827 252 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
SMG1-208ENST00000563448 RAD51AP2Q09MP3 1159 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 LAMC2Q13753 1193 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 GIT2Q14161 759 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 ANO5Q75V66 913 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 TRMT1LQ7Z2T5 733 aaKnown RBP11.31□□□□□ -0.6
SMG1-208ENST00000563448 SMYD4Q8IYR2 804 aaPredicted RBP11.31□□□□□ -0.6
SMG1-208ENST00000563448 AFAP1L1Q8TED9 768 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
SMG1-208ENST00000563448 SH2D3AQ9BRG2 576 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 ANKEF1Q9NU02 776 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 RMND1Q9NWS8 449 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 NOP56O00567 594 aaKnown RBP11.31□□□□□ -0.6
SMG1-208ENST00000563448 NKRFO15226 690 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMG1-208ENST00000563448 CD44P16070 742 aaKnown RBP11.31□□□□□ -0.6
SMG1-208ENST00000563448 ZNF165P49910 485 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 PRKCEQ02156 737 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 TNFAIP2Q03169 654 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 EHHADHQ08426 723 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 UTP14CQ5TAP6 766 aaKnown RBP11.31□□□□□ -0.6
SMG1-208ENST00000563448 ZNF658Q5TYW1 1059 aaPredicted RBP11.31□□□□□ -0.6
SMG1-208ENST00000563448 PLA2G4FQ68DD2 849 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 TRPV1Q8NER1 839 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 FAM200AQ8TCP9 573 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 REEP2Q9BRK0 252 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 CBX8Q9HC52 389 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 BMP2KQ9NSY1 1161 aaPredicted RBP11.31□□□□□ -0.6
SMG1-208ENST00000563448 SRRDQ9UH36 339 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 GDAQ9Y2T3 454 aa11.31□□□□□ -0.6
SMG1-208ENST00000563448 TRIP12Q14669 1992 aaPredicted RBP11.31□□□□□ -0.6
SMG1-208ENST00000563448 FRMD3A2A2Y4 597 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 ARHGEF35A5YM69 484 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 PPP1R3GB7ZBB8 358 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 FKTNO75072 461 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 KRT18P05783 430 aaKnown RBP11.3□□□□□ -0.6
SMG1-208ENST00000563448 IDEP14735 1019 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 STAT5BP51692 787 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 NPEPPSP55786 919 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 COASYQ13057 564 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 IQCB1Q15051 598 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 XKR9Q5GH70 373 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 FAM160B1Q5W0V3 765 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 PADI6Q6TGC4 694 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 MLKLQ8NB16 471 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 ZNF296Q8WUU4 475 aaPredicted RBP11.3□□□□□ -0.6
SMG1-208ENST00000563448 HPS3Q969F9 1004 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 CCDC47Q96A33 483 aaKnown RBP11.3□□□□□ -0.6
SMG1-208ENST00000563448 ERO1AQ96HE7 468 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 GRPEL1Q9HAV7 217 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 POLD4Q9HCU8 107 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 EXOC1Q9NV70 894 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 PANK4Q9NVE7 773 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 GNEQ9Y223 722 aaKnown RBP11.3□□□□□ -0.6
SMG1-208ENST00000563448 EMSYQ7Z589 1322 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 SIP14410 1827 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 RSPH10B2B2RC85 870 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 CAVIN2O95810 425 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 OATP04181 439 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 RSPH10BP0C881 870 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 CYBAP13498 195 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 STK4Q13043 487 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 TRIM32Q13049 653 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 XKR3Q5GH77 459 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 OTUD6AQ7L8S5 288 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 CCDC65Q8IXS2 484 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 OR6J1Q8NGC5 347 aa11.3□□□□□ -0.6
SMG1-208ENST00000563448 PPTC7Q8NI37 304 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms