RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 GNA11P29992 359 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 CHRNA3P32297 505 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 KIF6Q6ZMV9 814 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 MCM10Q7L590 875 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 WWP1Q9H0M0 922 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 SNX5Q9Y5X3 404 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 H0Y626 953 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 C4BPBP20851 252 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 STAT1P42224 750 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 ARFIP2P53365 341 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 OLR1P78380 273 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 PDE4BQ07343 736 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 PPIDQ08752 370 aaKnown RBP6.71□□□□□ -1.33
CLK3-212ENST00000563418 TMEM63BQ5T3F8 832 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 CD302Q8IX05 232 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 MYOCDQ8IZQ8 938 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 C1orf131Q8NDD1 294 aaKnown RBP6.71□□□□□ -1.33
CLK3-212ENST00000563418 MAP4K1Q92918 833 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 NLRP2Q9NX02 1062 aa6.71□□□□□ -1.33
CLK3-212ENST00000563418 BTBD11A6QL63 1104 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 MOCS3O95396 460 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 MRPL28Q13084 256 aaKnown RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 TTC38Q5R3I4 469 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 KRT27Q7Z3Y8 459 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 TMEM110Q86TL2 294 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 DIS3L2Q8IYB7 885 aaKnown RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 AENQ8WTP8 325 aaKnown RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 ERP27Q96DN0 273 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 RTEL1-TNFRSF6BF6WH68 1400 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 ZNF518AQ6AHZ1 1483 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 CAPN9O14815 690 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 RGS21Q2M5E4 152 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 KRT39Q6A163 491 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 PPP1R2P3Q6NXS1 205 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 C1orf228Q6PIY5 440 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 SUN5Q8TC36 379 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 TMBIM4Q9HC24 238 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 PCDH18Q9HCL0 1135 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 DNMBPQ6XZF7 1577 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 RPN1P04843 607 aaKnown RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 ATP1A1P05023 1023 aaKnown RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 TRAPPC10P48553 1259 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 GRIK3Q13003 919 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 KRT31Q15323 416 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 FOXP1Q9H334 677 aaPredicted RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 FAM53CQ9NYF3 392 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 PKD2L2Q9NZM6 624 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 GOLGA8IPA6NC78 632 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 LGALS16A8MUM7 142 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 ATP5BP06576 529 aaKnown RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 COL23A1Q86Y22 540 aaPredicted RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 TUBGCP5Q96RT8 1024 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 POLR3CQ9BUI4 534 aaPredicted RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 IMPG2Q9BZV3 1241 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 MOV10Q9HCE1 1003 aaKnown RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 A0A0G2JND7 137 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 EIF4E1BA6NMX2 242 aaKnown RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 LAD1O00515 517 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 MAML1Q92585 1016 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 MRPL44Q9H9J2 332 aaKnown RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 CABP5Q9NP86 173 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 SPATA7Q9P0W8 599 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 APOBEC2Q9Y235 224 aaKnown RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 RANBP6O60518 1105 aaKnown RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 PENKP01210 267 aaPredicted RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 S100A5P33763 92 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 SGSM1Q2NKQ1 1148 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 ATAD3BQ5T9A4 648 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 FLCNQ8NFG4 579 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 ST13P5Q8NFI4 369 aaPredicted RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 KCNK16Q96T55 309 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 OSBPL8Q9BZF1 889 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 EHMT1Q9H9B1 1298 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 EMC3Q9P0I2 261 aa6.71□□□□□ -1.34
CLK3-212ENST00000563418 WARS2Q9UGM6 360 aaKnown RBP6.71□□□□□ -1.34
CLK3-212ENST00000563418 PTPN4P29074 926 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 RAB14P61106 215 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 TCHHQ07283 1943 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 ATXN2LQ8WWM7 1075 aaKnown RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 RASSF5Q8WWW0 418 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 ALKBH8Q96BT7 664 aaKnown RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 LRRC1Q9BTT6 524 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 SSX2IPQ9Y2D8 614 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 INHBAP08476 426 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 ZNF12P17014 697 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 IFIT1BQ5T764 474 aaKnown RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 LRRC74BQ6ZQY2 392 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 RAPGEF5Q92565 580 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 NMD3Q96D46 503 aaKnown RBP6.7□□□□□ -1.34
CLK3-212ENST00000563418 CMTM5Q96DZ9 223 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 TSPY2A6NKD2 308 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 NBPF26B4DH59 902 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 TSPY3P0CV98 308 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 TSPY8P0CW00 308 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 TSPY1Q01534 308 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 RIPPLY1Q0D2K3 151 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 MAN2A1Q16706 1144 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 BTNL9Q6UXG8 535 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 SIX6OS1Q8N1H7 587 aa6.7□□□□□ -1.34
CLK3-212ENST00000563418 C8orf58Q8NAV2 365 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms