RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 FEZ1Q99689 392 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 CABP5Q9NP86 173 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 USP40Q9NVE5 1235 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 ARHGAP20Q9P2F6 1191 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 ARHGAP28Q9P2N2 729 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 PLAAQ9Y263 795 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 CD2APQ9Y5K6 639 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 TNPO3Q9Y5L0 923 aaKnown RBP6.98□□□□□ -1.29
LINC00254-201ENST00000563416 LRRIQ1Q96JM4 1722 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 ADAMTS20P59510 1910 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 KDM5BQ9UGL1 1544 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 ZNF839A8K0R7 811 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 SCDO00767 359 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 KCNK3O14649 394 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 TSPOAP1O95153 1857 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 ZNF28P17035 718 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 HERVK_113P62684 666 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 PFKPQ01813 784 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 FAM124AQ86V42 546 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 ZNF761Q86XN6 746 aaPredicted RBP6.97□□□□□ -1.29
LINC00254-201ENST00000563416 KCNH7Q9NS40 1196 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 RBPJLQ9UBG7 517 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 FTSJ1Q9UET6 329 aa6.97□□□□□ -1.29
LINC00254-201ENST00000563416 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
LINC00254-201ENST00000563416 UACAQ9BZF9 1416 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 M0R2C6 588 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 DDX3XO00571 662 aaKnown RBP eCLIP6.96□□□□□ -1.3
LINC00254-201ENST00000563416 ENPP3O14638 875 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 CYP1A1P04798 512 aaPredicted RBP6.96□□□□□ -1.3
LINC00254-201ENST00000563416 CHGBP05060 677 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 IL13P35225 146 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 KIAA2012Q0VF49 1180 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 SMAD2Q15796 467 aaKnown RBP6.96□□□□□ -1.3
LINC00254-201ENST00000563416 NT5DC1Q5TFE4 455 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 CPZQ66K79 652 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 TRMT10BQ6PF06 316 aaKnown RBP6.96□□□□□ -1.3
LINC00254-201ENST00000563416 TTLL10Q6ZVT0 673 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 NOSTRINQ8IVI9 506 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 FAM9AQ8IZU1 332 aaPredicted RBP6.96□□□□□ -1.3
LINC00254-201ENST00000563416 CHST14Q8NCH0 376 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 FEZF2Q8TBJ5 459 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 NINJ1Q92982 152 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 WNK4Q96J92 1243 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 BOCQ9BWV1 1114 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 WASF3Q9UPY6 502 aa6.96□□□□□ -1.3
LINC00254-201ENST00000563416 PPRC1Q5VV67 1664 aaKnown RBP6.96□□□□□ -1.3
LINC00254-201ENST00000563416 MAP3K4Q9Y6R4 1608 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 C9orf118A6NHY6 69 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 GLRX3O76003 335 aaKnown RBP6.95□□□□□ -1.3
LINC00254-201ENST00000563416 C4BPAP04003 597 aaKnown RBP6.95□□□□□ -1.3
LINC00254-201ENST00000563416 JMJD7P0C870 316 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 SDSP20132 328 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 IRF9Q00978 393 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 ZNF460Q14592 562 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 RGL3Q3MIN7 710 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 CFAP100Q494V2 611 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 PIK3R6Q5UE93 754 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 MCTP2Q6DN12 878 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 PKN3Q6P5Z2 889 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 DPP8Q6V1X1 898 aaPredicted RBP6.95□□□□□ -1.3
LINC00254-201ENST00000563416 NIM1KQ8IY84 436 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 SYT8Q8NBV8 401 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 TMEM168Q9H0V1 697 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 XYLT2Q9H1B5 865 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 ZFP69BQ9UJL9 534 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 TBX22Q9Y458 520 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 PLB1Q6P1J6 1458 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 GLI2P10070 1586 aa6.95□□□□□ -1.3
LINC00254-201ENST00000563416 CFAP43Q8NDM7 1665 aa6.94□□□□□ -1.3
LINC00254-201ENST00000563416 ABCC10Q5T3U5 1492 aa6.94□□□□□ -1.3
LINC00254-201ENST00000563416 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.94□□□□□ -1.3
LINC00254-201ENST00000563416 TLDC2A0PJX2 215 aa6.94□□□□□ -1.3
LINC00254-201ENST00000563416 OTOL1A6NHN0 477 aaPredicted RBP6.94□□□□□ -1.3
LINC00254-201ENST00000563416 PTGS1P23219 599 aa6.94□□□□□ -1.3
LINC00254-201ENST00000563416 AOAHP28039 575 aa6.94□□□□□ -1.3
LINC00254-201ENST00000563416 GLRBP48167 497 aa6.94□□□□□ -1.3
LINC00254-201ENST00000563416 MLLT6P55198 1093 aaPredicted RBP6.94□□□□□ -1.3
LINC00254-201ENST00000563416 TKFCQ3LXA3 575 aa6.94□□□□□ -1.3
LINC00254-201ENST00000563416 CDCA2Q69YH5 1023 aaPredicted RBP6.94□□□□□ -1.3
LINC00254-201ENST00000563416 OTOP1Q7RTM1 612 aa6.94□□□□□ -1.3
LINC00254-201ENST00000563416 FRMD5Q7Z6J6 570 aa6.94□□□□□ -1.3
LINC00254-201ENST00000563416 ZDHHC14Q8IZN3 488 aa6.94□□□□□ -1.3
LINC00254-201ENST00000563416 TXNDC5Q8NBS9 432 aaKnown RBP6.94□□□□□ -1.3
LINC00254-201ENST00000563416 LCORQ96JN0 433 aaPredicted RBP6.94□□□□□ -1.3
LINC00254-201ENST00000563416 SLC39A2Q9NP94 309 aa6.94□□□□□ -1.3
LINC00254-201ENST00000563416 B3GALT1Q9Y5Z6 326 aa6.94□□□□□ -1.3
LINC00254-201ENST00000563416 ARHGAP35Q9NRY4 1499 aa6.93□□□□□ -1.3
LINC00254-201ENST00000563416 MROH6A6NGR9 719 aa6.93□□□□□ -1.3
LINC00254-201ENST00000563416 NOBOXO60393 691 aa6.93□□□□□ -1.3
LINC00254-201ENST00000563416 HMGB1P09429 215 aaKnown RBP6.93□□□□□ -1.3
LINC00254-201ENST00000563416 HOXA5P20719 270 aa6.93□□□□□ -1.3
LINC00254-201ENST00000563416 SDHAP31040 664 aa6.93□□□□□ -1.3
LINC00254-201ENST00000563416 MECP2P51608 486 aaKnown RBP6.93□□□□□ -1.3
LINC00254-201ENST00000563416 NEK4P51957 841 aa6.93□□□□□ -1.3
LINC00254-201ENST00000563416 BORAQ6PGQ7 559 aa6.93□□□□□ -1.3
LINC00254-201ENST00000563416 KIAA0907Q7Z7F0 614 aaPredicted RBP6.93□□□□□ -1.3
LINC00254-201ENST00000563416 WDR48Q8TAF3 677 aa6.93□□□□□ -1.3
LINC00254-201ENST00000563416 ZCCHC14Q8WYQ9 949 aaKnown RBP6.93□□□□□ -1.3
LINC00254-201ENST00000563416 BARX1Q9HBU1 254 aaPredicted RBP6.93□□□□□ -1.3
LINC00254-201ENST00000563416 KCND1Q9NSA2 647 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms