RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 HRGP04196 525 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 SPATA31C1P0DKV0 1188 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 GALNSP34059 522 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 HOXD12P35452 270 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 PIK3CBP42338 1070 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 LSSP48449 732 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 INPP5AQ14642 412 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 ACAP2Q15057 778 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 PDZD4Q76G19 769 aaPredicted RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 DHX32Q7L7V1 743 aaKnown RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 FASTKD5Q7L8L6 764 aaKnown RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 GRAMD1CQ8IYS0 662 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 MSL3Q8N5Y2 521 aaKnown RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 TMEM102Q8N9M5 508 aaPredicted RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 ZSCAN18Q8TBC5 510 aaPredicted RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 DIS3LQ8TF46 1054 aaKnown RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 ZMAT2Q96NC0 199 aaKnown RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 GTPBP4Q9BZE4 634 aaKnown RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 TTLL3Q9Y4R7 772 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 MROH1Q8NDA8 1641 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 E9PCH4 1651 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 CPS1P31327 1500 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 A0A087WV62 115 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 WDR64B1ANS9 1081 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 TRAF5O00463 557 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 NCK2O43639 380 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 PLOD3O60568 738 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 TMEM127O75204 238 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 ULK1O75385 1050 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 RGS9O75916 674 aaPredicted RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 PSAPP07602 524 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 PLCG1P19174 1290 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 LTKP29376 864 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 BTKQ06187 659 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 NEXNQ0ZGT2 675 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 FAPQ12884 760 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 TRIM28Q13263 835 aaKnown RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 IFIT5Q13325 482 aaKnown RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 AP3B2Q13367 1082 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 ZNF423Q2M1K9 1284 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 ANO4Q32M45 955 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 WIPI1Q5MNZ9 446 aaPredicted RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 ATAT1Q5SQI0 421 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 SPATA1Q5VX52 437 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 MAP1SQ66K74 1059 aaPredicted RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 ITPRIPL1Q6GPH6 555 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 FAM35AQ86V20 835 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 KIF18BQ86Y91 864 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 ANKRD18AQ8IVF6 992 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 TMEM192Q8IY95 271 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 C7orf61Q8IZ16 206 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 FAM193BQ96PV7 902 aaPredicted RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 PPP1R16BQ96T49 567 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 HAUS7Q99871 368 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 CARD11Q9BXL7 1154 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 PLEKHA5Q9HAU0 1116 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 JPH1Q9HDC5 661 aaPredicted RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 H2AFY2Q9P0M6 372 aaPredicted RBP6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 SNCAIPQ9Y6H5 919 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 MYO3AQ8NEV4 1616 aa6.04□□□□□ -1.44
VPS35P1-201ENST00000563400 ARHGAP23Q9P227 1491 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 ZNF142P52746 1687 aaPredicted RBP6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 DIP2AQ14689 1571 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 TSPY2A6NKD2 308 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 B4E1Z4 1266 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 TISP43B9A030 160 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 B9A039 149 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 EIF3FO00303 357 aaPredicted RBP6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 GAS7O60861 476 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 ALBP02768 609 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 TSPY3P0CV98 308 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 TSPY8P0CW00 308 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 ATP2A2P16615 1042 aaKnown RBP6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 TNFSF4P23510 183 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 AKAP5P24588 427 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 COL8A1P27658 744 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 TSPY1Q01534 308 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 PFKPQ01813 784 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 CACNB2Q08289 660 aaPredicted RBP6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 DNAJC21Q5F1R6 531 aaKnown RBP6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 CCDC30Q5VVM6 783 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 SWSAP1Q6NVH7 229 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 LILRA6Q6PI73 481 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 NBPF11Q86T75 865 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 IPO4Q8TEX9 1081 aaKnown RBP6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 HPS3Q969F9 1004 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 RSRC1Q96IZ7 334 aaKnown RBP6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 NACC1Q96RE7 527 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 CHCHD6Q9BRQ6 235 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 PDGFDQ9GZP0 370 aaPredicted RBP6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 TOPORSQ9NS56 1045 aaPredicted RBP6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 ZNF652Q9Y2D9 606 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 STARD13Q9Y3M8 1113 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 IQSEC2Q5JU85 1478 aa6.03□□□□□ -1.44
VPS35P1-201ENST00000563400 ROCK2O75116 1388 aaKnown RBP6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 ABCC11Q96J66 1382 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 KRBA1A5PL33 1030 aa6.02□□□□□ -1.45
VPS35P1-201ENST00000563400 KPNA5O15131 536 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms