RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 CAND2O75155 1236 aa18.8■□□□□ 0.6
CLK3-207ENST00000562389 OATP04181 439 aa18.8■□□□□ 0.6
CLK3-207ENST00000562389 HSP90AA1P07900 732 aaKnown RBP18.8■□□□□ 0.6
CLK3-207ENST00000562389 CKBP12277 381 aa18.8■□□□□ 0.6
CLK3-207ENST00000562389 TXKP42681 527 aa18.8■□□□□ 0.6
CLK3-207ENST00000562389 CCL23P55773 120 aa18.8■□□□□ 0.6
CLK3-207ENST00000562389 PRKCEQ02156 737 aa18.8■□□□□ 0.6
CLK3-207ENST00000562389 EPHA7Q15375 998 aa18.8■□□□□ 0.6
CLK3-207ENST00000562389 ZNF484Q5JVG2 852 aa18.8■□□□□ 0.6
CLK3-207ENST00000562389 NCAPH2Q6IBW4 605 aa18.8■□□□□ 0.6
CLK3-207ENST00000562389 C4orf32Q8N8J7 132 aa18.8■□□□□ 0.6
CLK3-207ENST00000562389 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.8■□□□□ 0.6
CLK3-207ENST00000562389 A0A1W2PPC1 479 aa18.79■□□□□ 0.6
CLK3-207ENST00000562389 P4HBP07237 508 aaKnown RBP18.79■□□□□ 0.6
CLK3-207ENST00000562389 IQCF3P0C7M6 154 aa18.79■□□□□ 0.6
CLK3-207ENST00000562389 CSF2RAP15509 400 aa18.79■□□□□ 0.6
CLK3-207ENST00000562389 SELPP16109 830 aa18.79■□□□□ 0.6
CLK3-207ENST00000562389 RFC2P35250 354 aa18.79■□□□□ 0.6
CLK3-207ENST00000562389 PSMC5P62195 406 aa18.79■□□□□ 0.6
CLK3-207ENST00000562389 IGBP1P78318 339 aa18.79■□□□□ 0.6
CLK3-207ENST00000562389 TAF2Q6P1X5 1199 aa18.79■□□□□ 0.6
CLK3-207ENST00000562389 CEP131Q9UPN4 1083 aa18.79■□□□□ 0.6
CLK3-207ENST00000562389 ZBTB42B2RXF5 422 aa18.78■□□□□ 0.6
CLK3-207ENST00000562389 LAD1O00515 517 aa18.78■□□□□ 0.6
CLK3-207ENST00000562389 STX6O43752 255 aa18.78■□□□□ 0.6
CLK3-207ENST00000562389 DKC1O60832 514 aaKnown RBP eCLIP18.78■□□□□ 0.6
CLK3-207ENST00000562389 LRRC8DQ7L1W4 858 aa18.78■□□□□ 0.6
CLK3-207ENST00000562389 RPAINQ86UA6 219 aa18.78■□□□□ 0.6
CLK3-207ENST00000562389 BANK1Q8NDB2 785 aa18.78■□□□□ 0.6
CLK3-207ENST00000562389 TRAPPC12Q8WVT3 735 aa18.78■□□□□ 0.6
CLK3-207ENST00000562389 SCLYQ96I15 445 aa18.78■□□□□ 0.6
CLK3-207ENST00000562389 NRBP2Q9NSY0 501 aa18.78■□□□□ 0.6
CLK3-207ENST00000562389 MTMR6Q9Y217 621 aa18.78■□□□□ 0.6
CLK3-207ENST00000562389 MYH15Q9Y2K3 1946 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 PARNO95453 639 aaKnown RBP18.77■□□□□ 0.6
CLK3-207ENST00000562389 RPLP2P05387 115 aaKnown RBP18.77■□□□□ 0.6
CLK3-207ENST00000562389 PDIA4P13667 645 aaKnown RBP18.77■□□□□ 0.6
CLK3-207ENST00000562389 THPOP40225 353 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 QARSP47897 775 aaKnown RBP18.77■□□□□ 0.6
CLK3-207ENST00000562389 EPHB4P54760 987 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 PTGDRQ13258 359 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 XKR3Q5GH77 459 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 ZNF618Q5T7W0 954 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 TRAF7Q6Q0C0 670 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 MTHFD1LQ6UB35 978 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 RUFY4Q6ZNE9 571 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 FERMT3Q86UX7 667 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 TDHQ8IZJ6 230 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 NEK9Q8TD19 979 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 IL23AQ9NPF7 189 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 PCDHA2Q9Y5H9 948 aa18.77■□□□□ 0.6
CLK3-207ENST00000562389 SIP14410 1827 aa18.77■□□□□ 0.59
CLK3-207ENST00000562389 EVPLQ92817 2033 aa18.76■□□□□ 0.59
CLK3-207ENST00000562389 POTEMA6NI47 508 aa18.76■□□□□ 0.59
CLK3-207ENST00000562389 STBD1O95210 358 aa18.76■□□□□ 0.59
CLK3-207ENST00000562389 PFKMP08237 780 aa18.76■□□□□ 0.59
CLK3-207ENST00000562389 PRPHP41219 470 aa18.76■□□□□ 0.59
CLK3-207ENST00000562389 FXR2P51116 673 aaKnown RBP eCLIP18.76■□□□□ 0.59
CLK3-207ENST00000562389 RESTQ13127 1097 aa18.76■□□□□ 0.59
CLK3-207ENST00000562389 TMEM266Q2M3C6 531 aa18.76■□□□□ 0.59
CLK3-207ENST00000562389 PSRC1Q6PGN9 363 aaPredicted RBP18.76■□□□□ 0.59
CLK3-207ENST00000562389 TRMT1LQ7Z2T5 733 aaKnown RBP18.76■□□□□ 0.59
CLK3-207ENST00000562389 C4orf19Q8IY42 314 aa18.76■□□□□ 0.59
CLK3-207ENST00000562389 RPUSD2Q8IZ73 545 aaKnown RBP18.76■□□□□ 0.59
CLK3-207ENST00000562389 DYDC2Q96IM9 177 aa18.76■□□□□ 0.59
CLK3-207ENST00000562389 EIF2AK1Q9BQI3 630 aaKnown RBP18.76■□□□□ 0.59
CLK3-207ENST00000562389 LXNQ9BS40 222 aa18.76■□□□□ 0.59
CLK3-207ENST00000562389 NIFKQ9BYG3 293 aaKnown RBP18.76■□□□□ 0.59
CLK3-207ENST00000562389 ARID2Q68CP9 1835 aa18.76■□□□□ 0.59
CLK3-207ENST00000562389 SMIM35A0A1B0GVV1 85 aa18.75■□□□□ 0.59
CLK3-207ENST00000562389 C22orf31O95567 290 aa18.75■□□□□ 0.59
CLK3-207ENST00000562389 KLRC1P26715 233 aa18.75■□□□□ 0.59
CLK3-207ENST00000562389 TECP42680 631 aa18.75■□□□□ 0.59
CLK3-207ENST00000562389 ATP2C1P98194 919 aaPredicted RBP18.75■□□□□ 0.59
CLK3-207ENST00000562389 C16orf59Q7L2K0 433 aa18.75■□□□□ 0.59
CLK3-207ENST00000562389 RSPH3Q86UC2 560 aa18.75■□□□□ 0.59
CLK3-207ENST00000562389 VWCEQ96DN2 955 aa18.75■□□□□ 0.59
CLK3-207ENST00000562389 ZBTB10Q96DT7 871 aa18.75■□□□□ 0.59
CLK3-207ENST00000562389 HSD17B14Q9BPX1 270 aa18.75■□□□□ 0.59
CLK3-207ENST00000562389 ZSWIM4Q9H7M6 989 aa18.75■□□□□ 0.59
CLK3-207ENST00000562389 RGL1Q9NZL6 768 aa18.75■□□□□ 0.59
CLK3-207ENST00000562389 WRAP73Q9P2S5 460 aaPredicted RBP18.75■□□□□ 0.59
CLK3-207ENST00000562389 SEPT9Q9UHD8 586 aaPredicted RBP18.75■□□□□ 0.59
CLK3-207ENST00000562389 RSPH10B2B2RC85 870 aa18.74■□□□□ 0.59
CLK3-207ENST00000562389 MAGEB2O15479 319 aa18.74■□□□□ 0.59
CLK3-207ENST00000562389 SLITRK3O94933 977 aa18.74■□□□□ 0.59
CLK3-207ENST00000562389 RSPH10BP0C881 870 aa18.74■□□□□ 0.59
CLK3-207ENST00000562389 ACRP10323 421 aa18.74■□□□□ 0.59
CLK3-207ENST00000562389 CYP4A11Q02928 519 aa18.74■□□□□ 0.59
CLK3-207ENST00000562389 TARBP2Q15633 366 aaKnown RBP18.74■□□□□ 0.59
CLK3-207ENST00000562389 FAM26DQ5JW98 314 aa18.74■□□□□ 0.59
CLK3-207ENST00000562389 TMEM240Q5SV17 173 aa18.74■□□□□ 0.59
CLK3-207ENST00000562389 DNAJB3Q8WWF6 145 aa18.74■□□□□ 0.59
CLK3-207ENST00000562389 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.74■□□□□ 0.593e-7■□□□□ 10.6
CLK3-207ENST00000562389 ZSCAN16Q9H4T2 348 aaPredicted RBP18.74■□□□□ 0.59
CLK3-207ENST00000562389 TET1Q8NFU7 2136 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 LYPLA2O95372 231 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 BMP15O95972 392 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 CXCL10P02778 98 aa18.73■□□□□ 0.59
CLK3-207ENST00000562389 MGAT3Q09327 533 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms