RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SMCPP49901 116 aaPredicted RBP7.3□□□□□ -1.24
CAPN3-210ENST00000561817 SLC12A3P55017 1021 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 RPS6P62753 249 aaKnown RBP7.3□□□□□ -1.24
CAPN3-210ENST00000561817 UBXN2AP68543 259 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 PPATQ06203 517 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 SKIV2LQ15477 1246 aaKnown RBP7.3□□□□□ -1.24
CAPN3-210ENST00000561817 TKFCQ3LXA3 575 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 ARSHQ5FYA8 562 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 PCNX4Q63HM2 1172 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 LBX2Q6XYB7 198 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 SV2BQ7L1I2 683 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 CATSPER3Q86XQ3 398 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 IRF2BP1Q8IU81 584 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 CPXCR1Q8N123 301 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 KIAA0895Q8NCT3 520 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 NAP1L5Q96NT1 182 aaPredicted RBP7.3□□□□□ -1.24
CAPN3-210ENST00000561817 TRERF1Q96PN7 1200 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 TAAR1Q96RJ0 339 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 HSD17B14Q9BPX1 270 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 REPIN1Q9BWE0 567 aaKnown RBP7.3□□□□□ -1.24
CAPN3-210ENST00000561817 SAMSN1Q9NSI8 373 aaKnown RBP7.3□□□□□ -1.24
CAPN3-210ENST00000561817 RNF146Q9NTX7 359 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 IFNKQ9P0W0 207 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 RWDD2AQ9UIY3 292 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 RABGAP1Q9Y3P9 1069 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 NFE2L3Q9Y4A8 694 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 PCDHA2Q9Y5H9 948 aa7.3□□□□□ -1.24
CAPN3-210ENST00000561817 KDM3AQ9Y4C1 1321 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 A0A0U1RQG5 324 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 LRRC10BA6NIK2 292 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 E9PMD0 336 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 CNMDO75829 334 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 PLA2G4BP0C869 781 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 CYP11B2P19099 503 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 PTGS1P23219 599 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 CCT6AP40227 531 aaKnown RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 PMS1P54277 932 aaKnown RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 STX17P56962 302 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 PSMC6P62333 389 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 AMPD3Q01432 767 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 STK4Q13043 487 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 ITGB3BPQ13352 177 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 PPIL2Q13356 520 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 BAATQ14032 418 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 PGM5Q15124 567 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 GPAT2Q6NUI2 795 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 TTI2Q6NXR4 508 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 UNC13DQ70J99 1090 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 ERO1BQ86YB8 467 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 SPC24Q8NBT2 197 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 PROCA1Q8NCQ7 364 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 TRIM44Q96DX7 344 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 CALR3Q96L12 384 aaKnown RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 ZNF830Q96NB3 372 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 PURBQ96QR8 312 aaKnown RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 RIT2Q99578 217 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 DUSP9Q99956 384 aaKnown RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 EIF2AK1Q9BQI3 630 aaKnown RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 PDCD2LQ9BRP1 358 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 TEX13BQ9BXU2 312 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 NT5C3AQ9H0P0 336 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 UNC45AQ9H3U1 944 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 EHMT1Q9H9B1 1298 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 ELP3Q9H9T3 547 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 GBA2Q9HCG7 927 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 AGO4Q9HCK5 861 aaKnown RBP7.29□□□□□ -1.24
CAPN3-210ENST00000561817 JADE2Q9NQC1 790 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 PXMP2Q9NR77 195 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 HOXC10Q9NYD6 342 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 TMOD4Q9NZQ9 345 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 BTBD7Q9P203 1132 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 KIAA1024Q9UPX6 916 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 CTNND2Q9UQB3 1225 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 PPME1Q9Y570 386 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 CSADQ9Y600 493 aa7.29□□□□□ -1.24
CAPN3-210ENST00000561817 ASTN1O14525 1302 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 PASKQ96RG2 1323 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 SYNRGQ9UMZ2 1314 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 A0A1B0GTH6 734 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 TMEM88BA6NKF7 163 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 ZNF500O60304 480 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-210ENST00000561817 COBLO75128 1261 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 SLITRK3O94933 977 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 FCER1AP12319 257 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 HSPA6P17066 643 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 MUTP22033 750 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 ZNF76P36508 570 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 PBX1P40424 430 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 HUNKP57058 714 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 TPM4P67936 248 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 ASIC1P78348 528 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 GUCA2AQ02747 115 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 PAK1Q13153 545 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 TBX2Q13207 712 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-210ENST00000561817 ARID5BQ14865 1188 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 NR1I3Q14994 352 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 EPHA7Q15375 998 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 LRCH2Q5VUJ6 765 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 NCAPH2Q6IBW4 605 aa7.28□□□□□ -1.24
CAPN3-210ENST00000561817 SNRNP48Q6IEG0 339 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms