RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 PLCB4Q15147 1175 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 UBE2SQ16763 222 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 WWC2Q6AWC2 1192 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 APOA5Q6Q788 366 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 NIPA1Q7RTP0 329 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 RTN4RL1Q86UN2 441 aaPredicted RBP9.61□□□□□ -0.87
PALB2-202ENST00000561514 NPAS4Q8IUM7 802 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 CMTR1Q8N1G2 835 aaKnown RBP9.61□□□□□ -0.87
PALB2-202ENST00000561514 SPDYE1Q8NFV5 336 aaPredicted RBP9.61□□□□□ -0.87
PALB2-202ENST00000561514 CRYGNQ8WXF5 182 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 GLG1Q92896 1179 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 MXRA8Q9BRK3 442 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 ESYT1Q9BSJ8 1104 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 KCNH6Q9H252 994 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 RIC8AQ9NPQ8 531 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 SLC9A2Q9UBY0 812 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 PLAGL2Q9UPG8 496 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 PCDHA2Q9Y5H9 948 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 SLC12A7Q9Y666 1083 aa9.61□□□□□ -0.87
PALB2-202ENST00000561514 TTC3P53804 2025 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 MEIS1O00470 390 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 TBX10O75333 385 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 RXRAP19793 462 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 MARK3P27448 753 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 CD52P31358 61 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 SREBF1P36956 1147 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 CLK2P49760 499 aaKnown RBP9.6□□□□□ -0.87
PALB2-202ENST00000561514 ACTR2P61160 394 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 AP3B2Q13367 1082 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 SMAD4Q13485 552 aaKnown RBP9.6□□□□□ -0.87
PALB2-202ENST00000561514 BTG3Q14201 252 aaPredicted RBP9.6□□□□□ -0.87
PALB2-202ENST00000561514 CEP55Q53EZ4 464 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 IER5Q5VY09 327 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 CREB3L3Q68CJ9 461 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 NFXL1Q6ZNB6 911 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 PLCD3Q8N3E9 789 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 NME8Q8N427 588 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 CYP2W1Q8TAV3 490 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 TNPO1Q92973 898 aaKnown RBP9.6□□□□□ -0.87
PALB2-202ENST00000561514 MSLNLQ96KJ4 702 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 RBM28Q9NW13 759 aaKnown RBP9.6□□□□□ -0.87
PALB2-202ENST00000561514 CLDND1Q9NY35 253 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 PADI3Q9ULW8 664 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 TRPV2Q9Y5S1 764 aa9.6□□□□□ -0.87
PALB2-202ENST00000561514 MRPL42Q9Y6G3 142 aaKnown RBP9.6□□□□□ -0.87
PALB2-202ENST00000561514 ZNF318Q5VUA4 2279 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 hCG_1642624A0A1W2PR95 340 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 MBTPS2O43462 519 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 CCNE2O96020 404 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 ITGB1P05556 798 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 SSTR3P32745 418 aaPredicted RBP9.59□□□□□ -0.87
PALB2-202ENST00000561514 IRS1P35568 1242 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 EXOSC10Q01780 885 aaKnown RBP9.59□□□□□ -0.87
PALB2-202ENST00000561514 DLX2Q07687 328 aaPredicted RBP9.59□□□□□ -0.87
PALB2-202ENST00000561514 ADAM15Q13444 863 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 TSGA10IPQ3SY00 556 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 HERC4Q5GLZ8 1057 aaPredicted RBP9.59□□□□□ -0.87
PALB2-202ENST00000561514 HEATR3Q7Z4Q2 680 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 MICU3Q86XE3 530 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 EFHBQ8N7U6 833 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 SPPL3Q8TCT6 385 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 ZBTB10Q96DT7 871 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 POP1Q99575 1024 aaKnown RBP9.59□□□□□ -0.87
PALB2-202ENST00000561514 ANO3Q9BYT9 981 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 CELF4Q9BZC1 486 aaKnown RBP9.59□□□□□ -0.87
PALB2-202ENST00000561514 GLT8D2Q9H1C3 349 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 TMX1Q9H3N1 280 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 AZI2Q9H6S1 392 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 AGO4Q9HCK5 861 aaKnown RBP9.59□□□□□ -0.87
PALB2-202ENST00000561514 FAM217BQ9NTX9 383 aaPredicted RBP9.59□□□□□ -0.87
PALB2-202ENST00000561514 COL1A2P08123 1366 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 RALGAPA2Q2PPJ7 1873 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 ZDBF2Q9HCK1 2354 aa9.59□□□□□ -0.87
PALB2-202ENST00000561514 MYH7BA7E2Y1 1941 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 IGLV3-22A0A075B6J6 115 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 ESYT2A0FGR8 921 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 ZBTB42B2RXF5 422 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 STXBP3O00186 592 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 DHX15O43143 795 aaKnown RBP9.58□□□□□ -0.88
PALB2-202ENST00000561514 CYP3A4P08684 503 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 ARP10275 920 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 SCG2P13521 617 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 DNAJB1P25685 340 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 STAT5BP51692 787 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 RBM10P98175 930 aaKnown RBP9.58□□□□□ -0.88
PALB2-202ENST00000561514 COASYQ13057 564 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 HSP90AA2PQ14568 343 aaPredicted RBP9.58□□□□□ -0.88
PALB2-202ENST00000561514 CBX2Q14781 532 aaPredicted RBP9.58□□□□□ -0.88
PALB2-202ENST00000561514 MTHFD1LQ6UB35 978 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 ABHD15Q6UXT9 468 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 SMRP1Q8NCR6 262 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 ATP8B4Q8TF62 1192 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 IPO9Q96P70 1041 aaKnown RBP9.58□□□□□ -0.88
PALB2-202ENST00000561514 SDF4Q9BRK5 362 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 FAM49AQ9H0Q0 323 aaPredicted RBP9.58□□□□□ -0.88
PALB2-202ENST00000561514 ERVK-5Q9HDB9 667 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 BARHL2Q9NY43 387 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 PKD2L1Q9P0L9 805 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 CLEC1BQ9P126 229 aa9.58□□□□□ -0.88
PALB2-202ENST00000561514 TRPC6Q9Y210 931 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms