RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SREK1Q8WXA9 508 aaKnown RBP4.2□□□□□ -1.74
SPG11-225ENST00000561391 ATG4CQ96DT6 458 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 DRC1Q96MC2 740 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 GMLQ99445 158 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 KIF2CQ99661 725 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 MIPEPQ99797 713 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 FOXQ1Q9C009 403 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 NSUN3Q9H649 340 aaKnown RBP4.2□□□□□ -1.74
SPG11-225ENST00000561391 C11orf49Q9H6J7 331 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 CPA4Q9UI42 421 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 GABRQQ9UN88 632 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 USP16Q9Y5T5 823 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 SNX11Q9Y5W9 270 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 RIC1Q4ADV7 1423 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 ABCC4O15439 1325 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 FAM205AQ6ZU69 1335 aa4.2□□□□□ -1.74
SPG11-225ENST00000561391 SCN7AQ01118 1682 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 HEG1Q9ULI3 1381 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 ADCY3O60266 1144 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 USP2O75604 605 aaPredicted RBP4.19□□□□□ -1.74
SPG11-225ENST00000561391 STK10O94804 968 aaKnown RBP4.19□□□□□ -1.74
SPG11-225ENST00000561391 SASH1O94885 1247 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 LRIG2O94898 1065 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 CST3P01034 146 aaPredicted RBP4.19□□□□□ -1.74
SPG11-225ENST00000561391 FGRP09769 529 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 POLR2BP30876 1174 aaKnown RBP4.19□□□□□ -1.74
SPG11-225ENST00000561391 GBP1P32455 592 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 KCNQ1P51787 676 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 TFF2Q03403 129 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 PRKCZQ05513 592 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 NLRC3Q7RTR2 1065 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 CDH24Q86UP0 819 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 LSRQ86X29 649 aaPredicted RBP4.19□□□□□ -1.74
SPG11-225ENST00000561391 MFSD2AQ8NA29 543 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 AGBL3Q8NEM8 1001 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 RIN3Q8TB24 985 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 OPTNQ96CV9 577 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 SHDQ96IW2 340 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 POLKQ9UBT6 870 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 POLLQ9UGP5 575 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 STRIP2Q9ULQ0 834 aa4.19□□□□□ -1.74
SPG11-225ENST00000561391 TPX2Q9ULW0 747 aaKnown RBP4.19□□□□□ -1.74
SPG11-225ENST00000561391 R3HCC1Q9Y3T6 440 aaKnown RBP4.19□□□□□ -1.74
SPG11-225ENST00000561391 ROCK2O75116 1388 aaKnown RBP4.18□□□□□ -1.74
SPG11-225ENST00000561391 PI4K2BG5E9Z4 385 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 WNT10BO00744 389 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 KCNQ3O43525 872 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 NUAK1O60285 661 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 CAPN2P17655 700 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 GIPRP48546 466 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 SMAD3P84022 425 aaKnown RBP4.18□□□□□ -1.74
SPG11-225ENST00000561391 KCNA10Q16322 511 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 LRRC26Q2I0M4 334 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 SULT6B1Q6IMI4 303 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 LETMD1Q6P1Q0 360 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 C17orf99Q6UX52 265 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 SLFN12Q8IYM2 578 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 FAM169BQ8N8A8 192 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 BAHD1Q8TBE0 780 aaPredicted RBP4.18□□□□□ -1.74
SPG11-225ENST00000561391 ANKS1AQ92625 1134 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 CCDC74BQ96LY2 380 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 SLC9A7Q96T83 725 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 DNAJC2Q99543 621 aaKnown RBP4.18□□□□□ -1.74
SPG11-225ENST00000561391 MXD3Q9BW11 206 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 TNKS2Q9H2K2 1166 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 FAM86C1Q9NVL1 165 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 GTF2IRD1Q9UHL9 959 aa4.18□□□□□ -1.74
SPG11-225ENST00000561391 COL2A1P02458 1487 aaPredicted RBP4.18□□□□□ -1.74
SPG11-225ENST00000561391 BDP1A6H8Y1 2624 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 GNAT3A8MTJ3 354 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 PRR33A8MZF0 331 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 RBAK-RBAKDNI3L0D1 243 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 SMAD7O15105 426 aaKnown RBP4.17□□□□□ -1.74
SPG11-225ENST00000561391 SLITRK5O94991 958 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 NME1P15531 152 aaKnown RBP4.17□□□□□ -1.74
SPG11-225ENST00000561391 ITGB8P26012 769 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 CAP2P40123 477 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 GTF2A2P52657 109 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 GPSM2P81274 684 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 ZYXQ15942 572 aaKnown RBP4.17□□□□□ -1.74
SPG11-225ENST00000561391 CDCP2Q5VXM1 449 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 ZNF790Q6PG37 636 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 ATG14Q6ZNE5 492 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 ANKS3Q6ZW76 656 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 DDX46Q7L014 1031 aaKnown RBP4.17□□□□□ -1.74
SPG11-225ENST00000561391 ANKRD13AQ8IZ07 590 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 OR6P1Q8NGX9 317 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 CYB5D2Q8WUJ1 264 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 EYA3Q99504 573 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 TM9SF2Q99805 663 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.17□□□□□ -1.74
SPG11-225ENST00000561391 DEFB129Q9H1M3 183 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 EPB41L4BQ9H329 900 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 PRDM12Q9H4Q4 367 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 CNNM2Q9H8M5 875 aa4.17□□□□□ -1.74
SPG11-225ENST00000561391 BAHCC1Q9P281 2608 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 MEIS3P2A8K0S8 358 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 BTBD19C9JJ37 291 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 CBX7O95931 251 aa4.16□□□□□ -1.74
SPG11-225ENST00000561391 KRT1P04264 644 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms