RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	NRBP2	Q9NSY0	501 aa		29	■■■□□ 2.23
TCF12-222	ENST00000561152	CEP131	Q9UPN4	1083 aa		29	■■■□□ 2.23
TCF12-222	ENST00000561152	DKC1	O60832	514 aa	Known RBP eCLIP	28.99	■■■□□ 2.23	4e-21	■■■□□ 19
TCF12-222	ENST00000561152	ATP4A	P20648	1035 aa		28.99	■■■□□ 2.23
TCF12-222	ENST00000561152	THPO	P40225	353 aa		28.99	■■■□□ 2.23
TCF12-222	ENST00000561152	RSPH3	Q86UC2	560 aa		28.99	■■■□□ 2.23
TCF12-222	ENST00000561152	MTMR9	Q96QG7	549 aa		28.99	■■■□□ 2.23
TCF12-222	ENST00000561152	TTC12	Q9H892	705 aa	Predicted RBP	28.99	■■■□□ 2.23
TCF12-222	ENST00000561152	ZNF174	Q15697	407 aa		28.98	■■■□□ 2.23
TCF12-222	ENST00000561152	RILPL1	Q5EBL4	403 aa		28.98	■■■□□ 2.23
TCF12-222	ENST00000561152	MARCH8	Q5T0T0	291 aa		28.98	■■■□□ 2.23
TCF12-222	ENST00000561152	NCAPH2	Q6IBW4	605 aa		28.98	■■■□□ 2.23
TCF12-222	ENST00000561152	WNT8B	Q93098	351 aa		28.98	■■■□□ 2.23
TCF12-222	ENST00000561152	OAT	P04181	439 aa		28.97	■■■□□ 2.23
TCF12-222	ENST00000561152	HSP90AA1	P07900	732 aa	Known RBP	28.97	■■■□□ 2.23
TCF12-222	ENST00000561152	TXK	P42681	527 aa		28.97	■■■□□ 2.23
TCF12-222	ENST00000561152	EPHB4	P54760	987 aa		28.97	■■■□□ 2.23
TCF12-222	ENST00000561152	PSMC5	P62195	406 aa		28.97	■■■□□ 2.23
TCF12-222	ENST00000561152	PRKCE	Q02156	737 aa		28.97	■■■□□ 2.23
TCF12-222	ENST00000561152	EPHA7	Q15375	998 aa		28.97	■■■□□ 2.23
TCF12-222	ENST00000561152	ZNF618	Q5T7W0	954 aa		28.97	■■■□□ 2.23
TCF12-222	ENST00000561152	RPAIN	Q86UA6	219 aa		28.97	■■■□□ 2.23
TCF12-222	ENST00000561152	EML1	O00423	815 aa		28.96	■■■□□ 2.23
TCF12-222	ENST00000561152	P4HB	P07237	508 aa	Known RBP	28.96	■■■□□ 2.23
TCF12-222	ENST00000561152	OR52Z1	P0C646	297 aa		28.96	■■■□□ 2.23
TCF12-222	ENST00000561152	SHH	Q15465	462 aa		28.96	■■■□□ 2.23
TCF12-222	ENST00000561152	MTIF3	Q9H2K0	278 aa	Known RBP	28.96	■■■□□ 2.23
TCF12-222	ENST00000561152	PCDHA2	Q9Y5H9	948 aa		28.96	■■■□□ 2.23
TCF12-222	ENST00000561152	VPS37C	A5D8V6	355 aa	Predicted RBP	28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	RSPH10B2	B2RC85	870 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	ZNF862	O60290	1169 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	FGB	P02675	491 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	RSPH10B	P0C881	870 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	ACR	P10323	421 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	QARS	P47897	775 aa	Known RBP	28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	SPIRE1	Q08AE8	756 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	UGCG	Q16739	394 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	XKR3	Q5GH77	459 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	TMEM240	Q5SV17	173 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	C9orf50	Q5SZB4	431 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	MTHFD1L	Q6UB35	978 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	TRMT1L	Q7Z2T5	733 aa	Known RBP	28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	BRAP	Q7Z569	592 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	DEFB128	Q7Z7B8	93 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	TRAPPC12	Q8WVT3	735 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	TMEM60	Q9H2L4	133 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	FOXD4L1	Q9NU39	408 aa		28.95	■■■□□ 2.22
TCF12-222	ENST00000561152	KLRC1	P26715	233 aa		28.94	■■■□□ 2.22
TCF12-222	ENST00000561152	TOB1	P50616	345 aa	Predicted RBP	28.94	■■■□□ 2.22
TCF12-222	ENST00000561152	RUFY4	Q6ZNE9	571 aa		28.94	■■■□□ 2.22
TCF12-222	ENST00000561152	ZNF365	Q70YC5	407 aa		28.94	■■■□□ 2.22
TCF12-222	ENST00000561152	BANK1	Q8NDB2	785 aa		28.94	■■■□□ 2.22
TCF12-222	ENST00000561152	RNPC3	Q96LT9	517 aa	Known RBP	28.94	■■■□□ 2.22
TCF12-222	ENST00000561152	SCN5A	Q14524	2016 aa		28.94	■■■□□ 2.22
TCF12-222	ENST00000561152	LAD1	O00515	517 aa		28.93	■■■□□ 2.22
TCF12-222	ENST00000561152	ACTN1	P12814	892 aa		28.93	■■■□□ 2.22
TCF12-222	ENST00000561152	TMEM266	Q2M3C6	531 aa		28.93	■■■□□ 2.22
TCF12-222	ENST00000561152	LRIT3	Q3SXY7	679 aa		28.93	■■■□□ 2.22
TCF12-222	ENST00000561152	C16orf59	Q7L2K0	433 aa		28.93	■■■□□ 2.22
TCF12-222	ENST00000561152	NEK9	Q8TD19	979 aa		28.93	■■■□□ 2.22
TCF12-222	ENST00000561152	FTO	Q9C0B1	505 aa	Known RBP eCLIP	28.93	■■■□□ 2.22
TCF12-222	ENST00000561152	SMIM35	A0A1B0GVV1	85 aa		28.92	■■■□□ 2.22
TCF12-222	ENST00000561152	MAGEB2	O15479	319 aa		28.92	■■■□□ 2.22
TCF12-222	ENST00000561152	SYT1	P21579	422 aa		28.92	■■■□□ 2.22
TCF12-222	ENST00000561152	NBR1	Q14596	966 aa		28.92	■■■□□ 2.22
TCF12-222	ENST00000561152	DNAJB3	Q8WWF6	145 aa		28.92	■■■□□ 2.22
TCF12-222	ENST00000561152	SEPT9	Q9UHD8	586 aa	Predicted RBP	28.92	■■■□□ 2.22
TCF12-222	ENST00000561152	PCDHB6	Q9Y5E3	794 aa		28.92	■■■□□ 2.22
TCF12-222	ENST00000561152	RANBP2	P49792	3224 aa	Known RBP	28.92	■■■□□ 2.22
TCF12-222	ENST00000561152	ZBTB42	B2RXF5	422 aa		28.91	■■■□□ 2.22
TCF12-222	ENST00000561152	CTSH	P09668	335 aa		28.91	■■■□□ 2.22
TCF12-222	ENST00000561152	FAM26D	Q5JW98	314 aa		28.91	■■■□□ 2.22
TCF12-222	ENST00000561152	TRAF7	Q6Q0C0	670 aa		28.91	■■■□□ 2.22
TCF12-222	ENST00000561152	NME8	Q8N427	588 aa		28.91	■■■□□ 2.22
TCF12-222	ENST00000561152	LXN	Q9BS40	222 aa		28.91	■■■□□ 2.22
TCF12-222	ENST00000561152	NIFK	Q9BYG3	293 aa	Known RBP	28.91	■■■□□ 2.22
TCF12-222	ENST00000561152	FAM49A	Q9H0Q0	323 aa	Predicted RBP	28.91	■■■□□ 2.22
TCF12-222	ENST00000561152	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	28.91	■■■□□ 2.22
TCF12-222	ENST00000561152	TRIOBP	Q9H2D6	2365 aa		28.9	■■■□□ 2.22
TCF12-222	ENST00000561152		M0QZ92	97 aa		28.9	■■■□□ 2.22
TCF12-222	ENST00000561152	CXCL10	P02778	98 aa		28.9	■■■□□ 2.22
TCF12-222	ENST00000561152	PDIA4	P13667	645 aa	Known RBP	28.9	■■■□□ 2.22
TCF12-222	ENST00000561152	PTGDR	Q13258	359 aa		28.9	■■■□□ 2.22
TCF12-222	ENST00000561152	IER5	Q5VY09	327 aa		28.9	■■■□□ 2.22
TCF12-222	ENST00000561152	HERVK_113	Q902F9	699 aa		28.9	■■■□□ 2.22
TCF12-222	ENST00000561152	EIF2AK1	Q9BQI3	630 aa	Known RBP	28.9	■■■□□ 2.22
TCF12-222	ENST00000561152	ZSWIM4	Q9H7M6	989 aa		28.9	■■■□□ 2.22
TCF12-222	ENST00000561152	DDX11L8	A8MPP1	907 aa		28.89	■■■□□ 2.22
TCF12-222	ENST00000561152	C22orf31	O95567	290 aa		28.89	■■■□□ 2.22
TCF12-222	ENST00000561152	TEC	P42680	631 aa		28.89	■■■□□ 2.22
TCF12-222	ENST00000561152	C4orf19	Q8IY42	314 aa		28.89	■■■□□ 2.22
TCF12-222	ENST00000561152	ERMN	Q8TAM6	284 aa		28.89	■■■□□ 2.22
TCF12-222	ENST00000561152	ZBTB10	Q96DT7	871 aa		28.89	■■■□□ 2.22
TCF12-222	ENST00000561152	DYDC2	Q96IM9	177 aa		28.89	■■■□□ 2.22
TCF12-222	ENST00000561152	RAB34	Q9BZG1	259 aa		28.89	■■■□□ 2.22
TCF12-222	ENST00000561152	NBN	O60934	754 aa		28.88	■■■□□ 2.21
TCF12-222	ENST00000561152	TMOD1	P28289	359 aa		28.88	■■■□□ 2.21
TCF12-222	ENST00000561152	TBC1D8B	Q0IIM8	1120 aa		28.88	■■■□□ 2.21
TCF12-222	ENST00000561152	OTUD6A	Q7L8S5	288 aa		28.88	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms